Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:07:15 (2702673): wrapper (7.7.26015): starting
12:07:15 (2702673): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 12:07:15] Arguments: --nthreads 8
[2025-12-14 12:07:15] Threads: 8
[2025-12-14 12:07:15] Checking for CVMFS
[2025-12-14 12:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 12:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 12:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 12:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 12:07:17] 2.13.3.0 13122 56250 385132 154002 2 658 27718596 32935937 29800 16776704 0 277344396 99.520 338923473 34791 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 12:07:17] CVMFS is ok
[2025-12-14 12:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 12:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 12:07:17] Further information can be found at the LHC@home message board.
[2025-12-14 12:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 12:07:17] Checking for apptainer binary...
[2025-12-14 12:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 12:07:17] Running /usr/bin/apptainer --version
[2025-12-14 12:07:17] apptainer version 1.4.5-2.el9
[2025-12-14 12:07:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 12:07:17] c6-8-25-2.aglt2.org
[2025-12-14 12:07:17] apptainer works
[2025-12-14 12:07:18] Set ATHENA_PROC_NUMBER=8
[2025-12-14 12:07:18] Set ATHENA_CORE_NUMBER=8
[2025-12-14 12:07:18] Starting ATLAS job with PandaID=6929309501
[2025-12-14 12:07:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 15:11:51]  *** The last 200 lines of the pilot log: ***
[2025-12-14 15:11:51] 2025-12-14 20:10:40,736 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 15:11:51] 2025-12-14 20:10:40,780 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2600.7639687499995
[2025-12-14 15:11:51] 2025-12-14 20:10:40,812 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929309501/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,812 | INFO     | extracted standard info from prmon json
[2025-12-14 15:11:51] 2025-12-14 20:10:40,813 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 15:11:51] 2025-12-14 20:10:40,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 15:11:51] 2025-12-14 20:10:40,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 15:11:51] 2025-12-14 20:10:40,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 15:11:51] 2025-12-14 20:10:40,816 | INFO     | fitting pss+swap vs Time
[2025-12-14 15:11:51] 2025-12-14 20:10:40,817 | INFO     | sum of square deviations: 1719442649.4689264
[2025-12-14 15:11:51] 2025-12-14 20:10:40,818 | INFO     | sum of deviations: 28810732354.542377
[2025-12-14 15:11:51] 2025-12-14 20:10:40,818 | INFO     | mean x: 1765737576.141243
[2025-12-14 15:11:51] 2025-12-14 20:10:40,818 | INFO     | mean y: 2481450.8983050846
[2025-12-14 15:11:51] 2025-12-14 20:10:40,818 | INFO     | intersect: -29583961999.411785
[2025-12-14 15:11:51] 2025-12-14 20:10:40,818 | INFO     | chi2: 2.1542273760955895
[2025-12-14 15:11:51] 2025-12-14 20:10:40,819 | INFO     | sum of square deviations: 1577799855.6511588
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | sum of deviations: 28214891099.976746
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | mean x: 1765737423.639535
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | mean y: 2480809.2093023257
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | intersect: -31573190173.83956
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | chi2: 2.1562638659344
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | current chi2=2.1562638659344 (change=-0.09453458169774759 %)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,820 | INFO     | right removable region: 171
[2025-12-14 15:11:51] 2025-12-14 20:10:40,821 | INFO     | sum of square deviations: 1577805833.6511588
[2025-12-14 15:11:51] 2025-12-14 20:10:40,822 | INFO     | sum of deviations: -7734520049.930234
[2025-12-14 15:11:51] 2025-12-14 20:10:40,822 | INFO     | mean x: 1765737728.639535
[2025-12-14 15:11:51] 2025-12-14 20:10:40,822 | INFO     | mean y: 2520451.3720930233
[2025-12-14 15:11:51] 2025-12-14 20:10:40,822 | INFO     | intersect: 8658296449.789555
[2025-12-14 15:11:51] 2025-12-14 20:10:40,822 | INFO     | chi2: 0.0888421860870393
[2025-12-14 15:11:51] 2025-12-14 20:10:40,822 | INFO     | current chi2=0.0888421860870393 (change=95.87591416426707 %)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,823 | INFO     | sum of square deviations: 1444169533.8323398
[2025-12-14 15:11:51] 2025-12-14 20:10:40,824 | INFO     | sum of deviations: -13467032353.844296
[2025-12-14 15:11:51] 2025-12-14 20:10:40,824 | INFO     | mean x: 1765737881.1377246
[2025-12-14 15:11:51] 2025-12-14 20:10:40,824 | INFO     | mean y: 2527032.51497006
[2025-12-14 15:11:51] 2025-12-14 20:10:40,824 | INFO     | intersect: 16468217948.032408
[2025-12-14 15:11:51] 2025-12-14 20:10:40,824 | INFO     | chi2: 0.017474280787418577
[2025-12-14 15:11:51] 2025-12-14 20:10:40,824 | INFO     | current chi2=0.017474280787418577 (change=80.33109994580852 %)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,825 | INFO     | sum of square deviations: 1318290391.2345653
[2025-12-14 15:11:51] 2025-12-14 20:10:40,825 | INFO     | sum of deviations: -13593850738.074076
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | mean x: 1765738033.6419754
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | mean y: 2527175.4814814813
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | intersect: 18210335888.545605
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | chi2: 0.014905364409330397
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | current chi2=0.014905364409330397 (change=14.701127956795743 %)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | left removable region: 30
[2025-12-14 15:11:51] 2025-12-14 20:10:40,826 | INFO     | sum of square deviations: 869219152.1843958
[2025-12-14 15:11:51] 2025-12-14 20:10:40,827 | INFO     | sum of deviations: -9839808869.581554
[2025-12-14 15:11:51] 2025-12-14 20:10:40,827 | INFO     | mean x: 1765738308.113475
[2025-12-14 15:11:51] 2025-12-14 20:10:40,827 | INFO     | mean y: 2523499.4113475177
[2025-12-14 15:11:51] 2025-12-14 20:10:40,828 | INFO     | intersect: 19991185072.124916
[2025-12-14 15:11:51] 2025-12-14 20:10:40,828 | INFO     | chi2: 0.013909746199497584
[2025-12-14 15:11:51] 2025-12-14 20:10:40,828 | INFO     | current memory leak: -11.32 B/s (using 141 data points, chi2=0.01)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,828 | INFO     | could have reported an average CPU frequency of 2597 MHz (9 samples)
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | ..............................
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . Timing measurements:
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . get job = 0 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . initial setup = 4 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . payload setup = 32 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . stage-in = 0 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . payload execution = 10817 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . stage-out = 4 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | . log creation = 0 s
[2025-12-14 15:11:51] 2025-12-14 20:10:40,829 | INFO     | ..............................
[2025-12-14 15:11:51] 2025-12-14 20:10:41,330 | INFO     | 
[2025-12-14 15:11:51] 2025-12-14 20:10:41,330 | INFO     | job summary report
[2025-12-14 15:11:51] 2025-12-14 20:10:41,330 | INFO     | --------------------------------------------------
[2025-12-14 15:11:51] 2025-12-14 20:10:41,330 | INFO     | PanDA job id: 6929309501
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | task id: 47886933
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | errors: (none)
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | pilot state: finished 
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | transexitcode: 0
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | exeerrorcode: 0
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | exeerrordiag: 
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | exitcode: 0
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | exitmsg: OK
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | cpuconsumptiontime: 45236 s
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | nevents: 400
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | neventsw: 0
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | pid: 2719819
[2025-12-14 15:11:51] 2025-12-14 20:10:41,331 | INFO     | pgrp: 2719819
[2025-12-14 15:11:51] 2025-12-14 20:10:41,332 | INFO     | corecount: 8
[2025-12-14 15:11:51] 2025-12-14 20:10:41,332 | INFO     | event service: False
[2025-12-14 15:11:51] 2025-12-14 20:10:41,332 | INFO     | sizes: {0: 2283792, 1: 2283820, 2: 2284019, 13: 2284019, 24: 2284075, 28: 2284365, 35: 2284521, 10853: 2313516, 10854: 2313515, 10859: 2322625, 10891: 2322827}
[2025-12-14 15:11:51] 2025-12-14 20:10:41,332 | INFO     | --------------------------------------------------
[2025-12-14 15:11:51] 2025-12-14 20:10:41,332 | INFO     | 
[2025-12-14 15:11:51] 2025-12-14 20:10:41,332 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 15:11:51] 2025-12-14 20:10:41,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 15:11:51] 2025-12-14 20:10:41,391 | INFO     | job 6929309501 has completed (purged errors)
[2025-12-14 15:11:51] 2025-12-14 20:10:41,391 | INFO     | overall cleanup function is called
[2025-12-14 15:11:51] 2025-12-14 20:10:42,022 | INFO     | PID=2708568 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 15:11:51] 2025-12-14 20:10:42,023 | INFO     | .. there are 21 such processes running
[2025-12-14 15:11:51] 2025-12-14 20:10:42,413 | INFO     | --- collectZombieJob: --- 10, [2719819]
[2025-12-14 15:11:51] 2025-12-14 20:10:42,413 | INFO     | zombie collector waiting for pid 2719819
[2025-12-14 15:11:51] 2025-12-14 20:10:42,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 15:11:51] 2025-12-14 20:10:42,414 | INFO     | collected zombie processes
[2025-12-14 15:11:51] 2025-12-14 20:10:42,414 | INFO     | will attempt to kill all subprocesses of pid=2719819
[2025-12-14 15:11:51] 2025-12-14 20:10:43,327 | INFO     | process IDs to be killed: [2719819] (in reverse order)
[2025-12-14 15:11:51] 2025-12-14 20:10:43,601 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 15:11:51] 2025-12-14 20:10:43,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 15:11:51] 2025-12-14 20:10:43,638 | INFO     | did not find any defunct processes belonging to 2719819
[2025-12-14 15:11:51] 2025-12-14 20:10:43,671 | INFO     | did not find any defunct processes belonging to 2719819
[2025-12-14 15:11:51] 2025-12-14 20:10:43,672 | INFO     | ready for new job
[2025-12-14 15:11:51] 2025-12-14 20:10:43,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 15:11:51] 2025-12-14 20:10:43,677 | INFO     | ***************************************
[2025-12-14 15:11:51] 2025-12-14 20:10:43,678 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 15:11:51] 2025-12-14 20:10:43,678 | INFO     | ***************************************
[2025-12-14 15:11:51] 2025-12-14 20:10:43,678 | INFO     | 
[2025-12-14 15:11:51] 2025-12-14 20:10:43,689 | INFO     | architecture information:
[2025-12-14 15:11:51] 2025-12-14 20:10:43,689 | INFO     | executing command: cat /etc/os-release
[2025-12-14 15:11:51] 2025-12-14 20:10:43,743 | INFO     | cat /etc/os-release:
[2025-12-14 15:11:51] NAME="CentOS Linux"
[2025-12-14 15:11:51] VERSION="7 (Core)"
[2025-12-14 15:11:51] ID="centos"
[2025-12-14 15:11:51] ID_LIKE="rhel fedora"
[2025-12-14 15:11:51] VERSION_ID="7"
[2025-12-14 15:11:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 15:11:51] ANSI_COLOR="0;31"
[2025-12-14 15:11:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 15:11:51] HOME_URL="https://www.centos.org/"
[2025-12-14 15:11:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 15:11:51] 
[2025-12-14 15:11:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 15:11:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 15:11:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 15:11:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 15:11:51] 
[2025-12-14 15:11:51] 2025-12-14 20:10:43,743 | INFO     | ***************************************
[2025-12-14 15:11:51] 2025-12-14 20:10:44,247 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 15:11:51] 2025-12-14 20:10:44,303 | INFO     | sufficient remaining disk space (74502373376 B)
[2025-12-14 15:11:51] 2025-12-14 20:10:44,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 15:11:51] 2025-12-14 20:10:44,303 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 15:11:51] 2025-12-14 20:10:44,304 | INFO     | update_server=False
[2025-12-14 15:11:51] 2025-12-14 20:10:44,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 15:11:51] 2025-12-14 20:10:44,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 15:11:51] 2025-12-14 20:10:44,783 | INFO     | all job control threads have been joined
[2025-12-14 15:11:51] 2025-12-14 20:10:45,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:11:51] 2025-12-14 20:10:45,089 | INFO     | aborting loop
[2025-12-14 15:11:51] 2025-12-14 20:10:45,224 | INFO     | all data control threads have been joined
[2025-12-14 15:11:51] 2025-12-14 20:10:45,309 | INFO     | [job] retrieve thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:45,488 | INFO     | [data] copytool_in thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:45,489 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:45,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:45,538 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:45,735 | INFO     | all payload control threads have been joined
[2025-12-14 15:11:51] 2025-12-14 20:10:45,790 | INFO     | [job] control thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:45,903 | INFO     | [payload] validate_post thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,102 | INFO     | [job] job monitor thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,230 | INFO     | [data] control thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:11:51] 2025-12-14 20:10:46,392 | INFO     | [job] validate thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,393 | INFO     | [data] copytool_out thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,451 | INFO     | [payload] failed_post thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,492 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:46,742 | INFO     | [payload] control thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:47,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 15:11:51] 2025-12-14 20:10:47,356 | INFO     | [job] queue monitor thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:10:51,206 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 15:11:51] 2025-12-14 20:11:15,059 | INFO     | PID=2708568 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 15:11:51] 2025-12-14 20:11:15,059 | INFO     | .. there are 21 such processes running
[2025-12-14 15:11:51] 2025-12-14 20:11:15,060 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 15:11:51] 2025-12-14 20:11:15,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 15:11:51] 2025-12-14 20:11:15,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 15:11:51] 2025-12-14 20:11:23,395 | INFO     | [monitor] cgroup control has ended
[2025-12-14 15:11:51] 2025-12-14 20:11:25,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073409861440)>', '<ExcThread(monitor, started 140072707946240)>']
[2025-12-14 15:11:51] 2025-12-14 20:11:26,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 15:11:51] 2025-12-14 20:11:26,144 | INFO     | [monitor] control thread has ended
[2025-12-14 15:11:51] 2025-12-14 20:11:30,170 | INFO     | all workflow threads have been joined
[2025-12-14 15:11:51] 2025-12-14 20:11:30,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 15:11:51] 2025-12-14 20:11:30,175 | INFO     | traces error code: 0
[2025-12-14 15:11:51] 2025-12-14 20:11:30,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 15:11:51] 2025-12-14 20:11:30,438 [wrapper] ==== pilot stdout END ====
[2025-12-14 15:11:51] 2025-12-14 20:11:30,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 15:11:51] 2025-12-14 20:11:30,468 [wrapper] pilotpid: 2708568
[2025-12-14 15:11:51] 2025-12-14 20:11:30,483 [wrapper] Pilot exit status: 0
[2025-12-14 15:11:51] 2025-12-14 20:11:30,563 [wrapper] pandaids: 6929309501
[2025-12-14 15:11:51] 2025-12-14 20:11:30,858 [wrapper] cleanup supervisor_pilot 3588016 2708569
[2025-12-14 15:11:51] 2025-12-14 20:11:30,872 [wrapper] Test setup, not cleaning
[2025-12-14 15:11:51] 2025-12-14 20:11:30,888 [wrapper] apfmon messages muted
[2025-12-14 15:11:51] 2025-12-14 20:11:30,903 [wrapper] ==== wrapper stdout END ====
[2025-12-14 15:11:51] 2025-12-14 20:11:30,926 [wrapper] ==== wrapper stderr END ====
[2025-12-14 15:11:51]  *** Error codes and diagnostics ***
[2025-12-14 15:11:51]     "exeErrorCode": 0,
[2025-12-14 15:11:51]     "exeErrorDiag": "",
[2025-12-14 15:11:51]     "pilotErrorCode": 0,
[2025-12-14 15:11:51]     "pilotErrorDiag": "",
[2025-12-14 15:11:51]  *** Listing of results directory ***
[2025-12-14 15:11:51] total 339472
[2025-12-14 15:11:51] -rwx------. 1 boincer umatlas     36322 Dec 13 06:39 runpilot2-wrapper.sh
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 06:43 pilot3.tar.gz
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 06:43 queuedata.json
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas       100 Dec 14 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 15:11:51] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 12:07 run_atlas
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas       105 Dec 14 12:07 job.xml
[2025-12-14 15:11:51] -rw-r--r--. 2 boincer umatlas 191465454 Dec 14 12:07 EVNT.47886929._000085.pool.root.1
[2025-12-14 15:11:51] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 12:07 start_atlas.sh
[2025-12-14 15:11:51] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 12:07 shared
[2025-12-14 15:11:51] -rw-r--r--. 2 boincer umatlas    592397 Dec 14 12:07 input.tar.gz
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas         0 Dec 14 12:07 boinc_lockfile
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas      2512 Dec 14 12:07 pandaJob.out
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas        57 Dec 14 12:07 setup.sh.local
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas    991024 Dec 14 12:08 agis_schedconf.cvmfs.json
[2025-12-14 15:11:51] drwx------. 5 boincer umatlas      4096 Dec 14 12:08 pilot3
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas      6876 Dec 14 15:02 init_data.xml
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas 148586915 Dec 14 15:09 HITS.47886933._002113.pool.root.1
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas       530 Dec 14 15:09 boinc_task_state.xml
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas      1044 Dec 14 15:09 memory_monitor_summary.json
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas   1516240 Dec 14 15:10 agis_ddmendpoints.agis.ALL.json
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas    403272 Dec 14 15:10 log.47886933._002113.job.log.tgz.1
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas      7830 Dec 14 15:10 heartbeat.json
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas        95 Dec 14 15:11 pilot_heartbeat.json
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas      4824 Dec 14 15:11 pilotlog.txt
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas   1418997 Dec 14 15:11 log.47886933._002113.job.log.1
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas       357 Dec 14 15:11 output.list
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas       620 Dec 14 15:11 runtime_log
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas   1843200 Dec 14 15:11 result.tar.gz
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas      9348 Dec 14 15:11 runtime_log.err
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas       655 Dec 14 15:11 7YPKDm98co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNRTKDmkazKEn.diag
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 15:11 boinc_mmap_file
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas        27 Dec 14 15:11 wrapper_checkpoint.txt
[2025-12-14 15:11:51] -rw-r--r--. 1 boincer umatlas     21319 Dec 14 15:11 stderr.txt
[2025-12-14 15:11:51] HITS file was successfully produced:
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas 148586915 Dec 14 15:09 shared/HITS.pool.root.1
[2025-12-14 15:11:51]  *** Contents of shared directory: ***
[2025-12-14 15:11:51] total 334492
[2025-12-14 15:11:51] -rw-r--r--. 2 boincer umatlas 191465454 Dec 14 12:07 ATLAS.root_0
[2025-12-14 15:11:51] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 12:07 start_atlas.sh
[2025-12-14 15:11:51] -rw-r--r--. 2 boincer umatlas    592397 Dec 14 12:07 input.tar.gz
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas 148586915 Dec 14 15:09 HITS.pool.root.1
[2025-12-14 15:11:51] -rw-------. 1 boincer umatlas   1843200 Dec 14 15:11 result.tar.gz
15:11:53 (2702673): run_atlas exited; CPU time 45764.249781
15:11:53 (2702673): called boinc_finish(0)

</stderr_txt>
]]>

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