Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:21 (20208): wrapper (7.7.26015): starting
01:13:21 (20208): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 01:13:21] Arguments: --nthreads 4
[2025-12-16 01:13:21] Threads: 4
[2025-12-16 01:13:21] Checking for CVMFS
[2025-12-16 01:13:21] No cvmfs_config command found, will try listing directly
[2025-12-16 01:13:22] CVMFS is ok
[2025-12-16 01:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 01:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 01:13:22] Further information can be found at the LHC@home message board.
[2025-12-16 01:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 01:13:22] Checking for apptainer binary...
[2025-12-16 01:13:22] which: no apptainer in ((null))
[2025-12-16 01:13:22] apptainer is not installed, using version from CVMFS
[2025-12-16 01:13:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 01:13:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-12-16 01:13:22] apptainer works
[2025-12-16 01:13:22] Set ATHENA_PROC_NUMBER=4
[2025-12-16 01:13:22] Set ATHENA_CORE_NUMBER=4
[2025-12-16 01:13:22] Starting ATLAS job with PandaID=6920421936
[2025-12-16 01:13:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:52:28]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:52:28] 2025-12-16 02:49:17,576 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2709.683296875
[2025-12-16 03:52:28] 2025-12-16 02:49:17,599 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6920421936/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,600 | INFO     | extracted standard info from prmon json
[2025-12-16 03:52:28] 2025-12-16 02:49:17,600 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 03:52:28] 2025-12-16 02:49:17,600 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 03:52:28] 2025-12-16 02:49:17,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 03:52:28] 2025-12-16 02:49:17,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 03:52:28] 2025-12-16 02:49:17,604 | INFO     | fitting pss+swap vs Time
[2025-12-16 03:52:28] 2025-12-16 02:49:17,604 | INFO     | sum of square deviations: 1110539892.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,605 | INFO     | sum of deviations: 5060371388.000004
[2025-12-16 03:52:28] 2025-12-16 02:49:17,605 | INFO     | mean x: 1765848688.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,605 | INFO     | mean y: 2310461.1895424835
[2025-12-16 03:52:28] 2025-12-16 02:49:17,606 | INFO     | intersect: -8044091330.104728
[2025-12-16 03:52:28] 2025-12-16 02:49:17,606 | INFO     | chi2: 2.014939100299321
[2025-12-16 03:52:28] 2025-12-16 02:49:17,606 | INFO     | sum of square deviations: 1005179777.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,607 | INFO     | sum of deviations: 13597260510.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,607 | INFO     | mean x: 1765848535.5
[2025-12-16 03:52:28] 2025-12-16 02:49:17,607 | INFO     | mean y: 2322481.689189189
[2025-12-16 03:52:28] 2025-12-16 02:49:17,607 | INFO     | intersect: -23884650881.480137
[2025-12-16 03:52:28] 2025-12-16 02:49:17,607 | INFO     | chi2: 1.348389122365659
[2025-12-16 03:52:28] 2025-12-16 02:49:17,607 | INFO     | current chi2=1.348389122365659 (change=33.08040316626172 %)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,608 | INFO     | sum of square deviations: 906703512.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,608 | INFO     | sum of deviations: 13203045020.999998
[2025-12-16 03:52:28] 2025-12-16 02:49:17,609 | INFO     | mean x: 1765848383.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,609 | INFO     | mean y: 2321870.972027972
[2025-12-16 03:52:28] 2025-12-16 02:49:17,609 | INFO     | intersect: -25711238727.885616
[2025-12-16 03:52:28] 2025-12-16 02:49:17,609 | INFO     | chi2: 1.3498121250442876
[2025-12-16 03:52:28] 2025-12-16 02:49:17,610 | INFO     | current chi2=1.3498121250442876 (change=-0.10553353294129524 %)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,610 | INFO     | right removable region: 142
[2025-12-16 03:52:28] 2025-12-16 02:49:17,610 | INFO     | sum of square deviations: 1005179777.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,611 | INFO     | sum of deviations: -14272630977.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,611 | INFO     | mean x: 1765848840.5
[2025-12-16 03:52:28] 2025-12-16 02:49:17,611 | INFO     | mean y: 2337976.256756757
[2025-12-16 03:52:28] 2025-12-16 02:49:17,611 | INFO     | intersect: 25075772040.79806
[2025-12-16 03:52:28] 2025-12-16 02:49:17,611 | INFO     | chi2: 0.6990446380433013
[2025-12-16 03:52:28] 2025-12-16 02:49:17,611 | INFO     | current chi2=0.6990446380433013 (change=65.30690987437498 %)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,612 | INFO     | sum of square deviations: 906703512.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,612 | INFO     | sum of deviations: -14690873634.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,612 | INFO     | mean x: 1765848993.0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,612 | INFO     | mean y: 2338593.048951049
[2025-12-16 03:52:28] 2025-12-16 02:49:17,613 | INFO     | intersect: 28613526340.261677
[2025-12-16 03:52:28] 2025-12-16 02:49:17,613 | INFO     | chi2: 0.6932858643159875
[2025-12-16 03:52:28] 2025-12-16 02:49:17,613 | INFO     | current chi2=0.6932858643159875 (change=0.8238062941778972 %)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,613 | INFO     | left removable region: 20
[2025-12-16 03:52:28] 2025-12-16 02:49:17,613 | INFO     | sum of square deviations: 563026370.5
[2025-12-16 03:52:28] 2025-12-16 02:49:17,614 | INFO     | sum of deviations: -4619810539.000003
[2025-12-16 03:52:28] 2025-12-16 02:49:17,614 | INFO     | mean x: 1765848962.5
[2025-12-16 03:52:28] 2025-12-16 02:49:17,614 | INFO     | mean y: 2350707.1967213117
[2025-12-16 03:52:28] 2025-12-16 02:49:17,614 | INFO     | intersect: 14491703381.734941
[2025-12-16 03:52:28] 2025-12-16 02:49:17,614 | INFO     | chi2: 0.004860356313830134
[2025-12-16 03:52:28] 2025-12-16 02:49:17,614 | INFO     | current memory leak: -8.21 B/s (using 122 data points, chi2=0.00)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,615 | INFO     | could have reported an average CPU frequency of 2713 MHz (9 samples)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,615 | INFO     | ..............................
[2025-12-16 03:52:28] 2025-12-16 02:49:17,615 | INFO     | . Timing measurements:
[2025-12-16 03:52:28] 2025-12-16 02:49:17,615 | INFO     | . get job = 0 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,615 | INFO     | . initial setup = 1 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,616 | INFO     | . payload setup = 9 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,616 | INFO     | . stage-in = 0 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,616 | INFO     | . payload execution = 9297 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,616 | INFO     | . stage-out = 0 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,616 | INFO     | . log creation = 0 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,616 | INFO     | ..............................
[2025-12-16 03:52:28] 2025-12-16 02:49:17,707 | INFO     | 
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | job summary report
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | --------------------------------------------------
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | PanDA job id: 6920421936
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | task id: 47751390
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | errors: (none)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | pilot state: finished 
[2025-12-16 03:52:28] 2025-12-16 02:49:17,708 | INFO     | transexitcode: 0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | exeerrorcode: 0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | exeerrordiag: 
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | exitcode: 0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | exitmsg: OK
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | cpuconsumptiontime: 35237 s
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | nevents: 400
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | neventsw: 0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | pid: 42834
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | pgrp: 42834
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | corecount: 4
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | event service: False
[2025-12-16 03:52:28] 2025-12-16 02:49:17,709 | INFO     | sizes: {0: 2283922, 7: 2284184, 11: 2284212, 9310: 2312888, 9312: 2321910, 9313: 2321966, 9322: 2322352}
[2025-12-16 03:52:28] 2025-12-16 02:49:17,710 | INFO     | --------------------------------------------------
[2025-12-16 03:52:28] 2025-12-16 02:49:17,710 | INFO     | 
[2025-12-16 03:52:28] 2025-12-16 02:49:17,710 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-12-16 03:52:28] 2025-12-16 02:49:17,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 03:52:28] 2025-12-16 02:49:17,742 | INFO     | job 6920421936 has completed (purged errors)
[2025-12-16 03:52:28] 2025-12-16 02:49:17,742 | INFO     | overall cleanup function is called
[2025-12-16 03:52:28] 2025-12-16 02:49:18,751 | INFO     | --- collectZombieJob: --- 10, [42834]
[2025-12-16 03:52:28] 2025-12-16 02:49:18,752 | INFO     | zombie collector waiting for pid 42834
[2025-12-16 03:52:28] 2025-12-16 02:49:18,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 03:52:28] 2025-12-16 02:49:18,752 | INFO     | collected zombie processes
[2025-12-16 03:52:28] 2025-12-16 02:49:18,752 | INFO     | will attempt to kill all subprocesses of pid=42834
[2025-12-16 03:52:28] 2025-12-16 02:49:19,540 | INFO     | process IDs to be killed: [42834] (in reverse order)
[2025-12-16 03:52:28] 2025-12-16 02:49:19,794 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 03:52:28] 2025-12-16 02:49:19,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 03:52:28] 2025-12-16 02:49:19,829 | INFO     | did not find any defunct processes belonging to 42834
[2025-12-16 03:52:28] 2025-12-16 02:49:19,861 | INFO     | did not find any defunct processes belonging to 42834
[2025-12-16 03:52:28] 2025-12-16 02:49:19,861 | INFO     | ready for new job
[2025-12-16 03:52:28] 2025-12-16 02:49:19,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 03:52:28] 2025-12-16 02:49:19,864 | INFO     | ***************************************
[2025-12-16 03:52:28] 2025-12-16 02:49:19,864 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 03:52:28] 2025-12-16 02:49:19,864 | INFO     | ***************************************
[2025-12-16 03:52:28] 2025-12-16 02:49:19,864 | INFO     | 
[2025-12-16 03:52:28] 2025-12-16 02:49:19,872 | INFO     | architecture information:
[2025-12-16 03:52:28] 2025-12-16 02:49:19,873 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:52:28] 2025-12-16 02:49:19,894 | INFO     | cat /etc/os-release:
[2025-12-16 03:52:28] NAME="CentOS Linux"
[2025-12-16 03:52:28] VERSION="7 (Core)"
[2025-12-16 03:52:28] ID="centos"
[2025-12-16 03:52:28] ID_LIKE="rhel fedora"
[2025-12-16 03:52:28] VERSION_ID="7"
[2025-12-16 03:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:52:28] ANSI_COLOR="0;31"
[2025-12-16 03:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:52:28] HOME_URL="https://www.centos.org/"
[2025-12-16 03:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:52:28] 
[2025-12-16 03:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:52:28] 
[2025-12-16 03:52:28] 2025-12-16 02:49:19,894 | INFO     | ***************************************
[2025-12-16 03:52:28] 2025-12-16 02:49:20,397 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-12-16 03:52:28] 2025-12-16 02:49:20,423 | INFO     | sufficient remaining disk space (3316845117440 B)
[2025-12-16 03:52:28] 2025-12-16 02:49:20,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:52:28] 2025-12-16 02:49:20,423 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:52:28] 2025-12-16 02:49:20,423 | INFO     | update_server=False
[2025-12-16 03:52:28] 2025-12-16 02:49:20,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:52:28] 2025-12-16 02:49:20,562 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 03:52:28] 2025-12-16 02:49:20,562 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 03:52:28] 2025-12-16 02:49:20,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:52:28] 2025-12-16 02:49:20,562 | INFO     | will abort loop
[2025-12-16 03:52:28] 2025-12-16 02:49:20,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:52:28] 2025-12-16 02:49:20,772 | INFO     | all payload control threads have been joined
[2025-12-16 03:52:28] 2025-12-16 02:49:21,269 | INFO     | all data control threads have been joined
[2025-12-16 03:52:28] 2025-12-16 02:49:21,429 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:21,528 | INFO     | [job] validate thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:21,568 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:21,626 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:21,692 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:21,778 | INFO     | [payload] control thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:21,932 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:22,090 | INFO     | all job control threads have been joined
[2025-12-16 03:52:28] 2025-12-16 02:49:22,275 | INFO     | [data] control thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:22,409 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:22,654 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:22,704 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:22,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:52:28] 2025-12-16 02:49:22,720 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:23,095 | INFO     | [job] control thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:23,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:52:28] 2025-12-16 02:49:23,723 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:27,622 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:30,527 | INFO     | job.realtimelogging is not enabled
[2025-12-16 03:52:28] 2025-12-16 02:49:31,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:52:28] 2025-12-16 02:49:51,065 | INFO     | PID=28108 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 03:52:28] 2025-12-16 02:49:51,065 | INFO     | .. there are 8 such processes running
[2025-12-16 03:52:28] 2025-12-16 02:49:51,065 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:52:28] 2025-12-16 02:49:51,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:52:28] 2025-12-16 02:49:51,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:52:28] 2025-12-16 02:49:51,530 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:52:28] 2025-12-16 02:49:52,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22844285060928)>', '<ExcThread(monitor, started 22843978913536)>']
[2025-12-16 03:52:28] 2025-12-16 02:49:53,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:52:28] 2025-12-16 02:49:53,075 | INFO     | [monitor] control thread has ended
[2025-12-16 03:52:28] 2025-12-16 02:49:57,771 | INFO     | all workflow threads have been joined
[2025-12-16 03:52:28] 2025-12-16 02:49:57,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:52:28] 2025-12-16 02:49:57,772 | INFO     | traces error code: 0
[2025-12-16 03:52:28] 2025-12-16 02:49:57,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:52:28] 2025-12-16 02:49:57,926 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:52:28] 2025-12-16 02:49:57,930 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:52:28] 2025-12-16 02:49:57,933 [wrapper] pilotpid: 28108
[2025-12-16 03:52:28] 2025-12-16 02:49:57,937 [wrapper] Pilot exit status: 0
[2025-12-16 03:52:28] 2025-12-16 02:49:57,952 [wrapper] pandaids: 6920421936
[2025-12-16 03:52:28] 2025-12-16 02:49:58,131 [wrapper] cleanup supervisor_pilot  329043 28109
[2025-12-16 03:52:28] 2025-12-16 02:49:58,137 [wrapper] Test setup, not cleaning
[2025-12-16 03:52:28] 2025-12-16 02:49:58,141 [wrapper] apfmon messages muted
[2025-12-16 03:52:28] 2025-12-16 02:49:58,145 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:52:28] 2025-12-16 02:49:58,149 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:52:28]  *** Error codes and diagnostics ***
[2025-12-16 03:52:28]     "exeErrorCode": 0,
[2025-12-16 03:52:28]     "exeErrorDiag": "",
[2025-12-16 03:52:28]     "pilotErrorCode": 0,
[2025-12-16 03:52:28]     "pilotErrorDiag": "",
[2025-12-16 03:52:28]  *** Listing of results directory ***
[2025-12-16 03:52:28] total 378556
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc    579449 Dec  7 01:58 pilot3.tar.gz
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc      5112 Dec  7 02:17 queuedata.json
[2025-12-16 03:52:28] -rwx------ 1 boinc boinc     36292 Dec  7 02:18 runpilot2-wrapper.sh
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc       100 Dec 16 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:52:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 01:13 run_atlas
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc       105 Dec 16 01:13 job.xml
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc      6692 Dec 16 01:13 init_data.xml
[2025-12-16 03:52:28] -rw-r--r-- 2 boinc boinc 198229124 Dec 16 01:13 EVNT.47751388._000046.pool.root.1
[2025-12-16 03:52:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 01:13 start_atlas.sh
[2025-12-16 03:52:28] drwxrwx--x 2 boinc boinc      4096 Dec 16 01:13 shared
[2025-12-16 03:52:28] -rw-r--r-- 2 boinc boinc    592362 Dec 16 01:13 input.tar.gz
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc         0 Dec 16 01:13 boinc_lockfile
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc      2473 Dec 16 01:13 pandaJob.out
[2025-12-16 03:52:28] -rw------- 1 boinc boinc    994555 Dec 16 01:13 agis_schedconf.cvmfs.json
[2025-12-16 03:52:28] -rw------- 1 boinc boinc   1516240 Dec 16 01:13 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:52:28] drwx------ 5 boinc boinc      4096 Dec 16 01:13 pilot3
[2025-12-16 03:52:28] -rw------- 1 boinc boinc 182206643 Dec 16 03:48 HITS.47751390._001121.pool.root.1
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc       528 Dec 16 03:48 boinc_task_state.xml
[2025-12-16 03:52:28] -rw------- 1 boinc boinc        95 Dec 16 03:48 pilot_heartbeat.json
[2025-12-16 03:52:28] -rw------- 1 boinc boinc      1032 Dec 16 03:49 memory_monitor_summary.json
[2025-12-16 03:52:28] -rw------- 1 boinc boinc    333240 Dec 16 03:49 log.47751390._001121.job.log.tgz.1
[2025-12-16 03:52:28] -rw------- 1 boinc boinc      7783 Dec 16 03:49 heartbeat.json
[2025-12-16 03:52:28] -rw------- 1 boinc boinc      5091 Dec 16 03:49 pilotlog.txt
[2025-12-16 03:52:28] -rw------- 1 boinc boinc   1310877 Dec 16 03:49 log.47751390._001121.job.log.1
[2025-12-16 03:52:28] -rw------- 1 boinc boinc       357 Dec 16 03:49 output.list
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc       620 Dec 16 03:49 runtime_log
[2025-12-16 03:52:28] -rw------- 1 boinc boinc   1658880 Dec 16 03:49 result.tar.gz
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc      9222 Dec 16 03:49 runtime_log.err
[2025-12-16 03:52:28] -rw------- 1 boinc boinc       663 Dec 16 03:49 Sd2LDmiaIm8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDAQKDmLbM5Jo.diag
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc        26 Dec 16 03:52 wrapper_checkpoint.txt
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc      8192 Dec 16 03:52 boinc_mmap_file
[2025-12-16 03:52:28] -rw-r--r-- 1 boinc boinc     20834 Dec 16 03:52 stderr.txt
[2025-12-16 03:52:28] HITS file was successfully produced:
[2025-12-16 03:52:28] -rw------- 1 boinc boinc 182206643 Dec 16 03:48 shared/HITS.pool.root.1
[2025-12-16 03:52:28]  *** Contents of shared directory: ***
[2025-12-16 03:52:28] total 373748
[2025-12-16 03:52:28] -rw-r--r-- 2 boinc boinc 198229124 Dec 16 01:13 ATLAS.root_0
[2025-12-16 03:52:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 01:13 start_atlas.sh
[2025-12-16 03:52:28] -rw-r--r-- 2 boinc boinc    592362 Dec 16 01:13 input.tar.gz
[2025-12-16 03:52:28] -rw------- 1 boinc boinc 182206643 Dec 16 03:48 HITS.pool.root.1
[2025-12-16 03:52:28] -rw------- 1 boinc boinc   1658880 Dec 16 03:49 result.tar.gz
03:52:29 (20208): run_atlas exited; CPU time 35808.326492
03:52:29 (20208): called boinc_finish(0)

</stderr_txt>
]]>

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