Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:29 (1935410): wrapper (7.7.26015): starting
15:54:29 (1935410): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 15:54:29] Arguments: --nthreads 8
[2025-12-14 15:54:29] Threads: 8
[2025-12-14 15:54:29] Checking for CVMFS
[2025-12-14 15:54:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 15:54:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 15:54:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 15:54:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 15:54:51] 2.13.2.0 7154 60150 162556 154007 2 65 33893623 40960000 10722 16776704 0 56104211 99.707 48637508 37392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 15:54:51] CVMFS is ok
[2025-12-14 15:54:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 15:54:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 15:54:51] Further information can be found at the LHC@home message board.
[2025-12-14 15:54:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 15:54:51] Checking for apptainer binary...
[2025-12-14 15:54:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 15:54:51] Running /usr/bin/apptainer --version
[2025-12-14 15:54:51] apptainer version 1.4.4-1.el9
[2025-12-14 15:54:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 15:54:52] c-211-7.aglt2.org
[2025-12-14 15:54:52] apptainer works
[2025-12-14 15:54:52] Set ATHENA_PROC_NUMBER=8
[2025-12-14 15:54:52] Set ATHENA_CORE_NUMBER=8
[2025-12-14 15:54:53] Starting ATLAS job with PandaID=6929438276
[2025-12-14 15:54:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 23:20:20]  *** The last 200 lines of the pilot log: ***
[2025-12-14 23:20:20] 2025-12-15 04:19:45,786 | INFO     | monitor loop #1684: job 0:6929438276 is in state 'finished'
[2025-12-14 23:20:20] 2025-12-15 04:19:45,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,010 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 23:20:20] 2025-12-15 04:19:46,027 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2507.8336041666666
[2025-12-14 23:20:20] 2025-12-15 04:19:46,050 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929438276/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,052 | INFO     | extracted standard info from prmon json
[2025-12-14 23:20:20] 2025-12-15 04:19:46,052 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 23:20:20] 2025-12-15 04:19:46,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 23:20:20] 2025-12-15 04:19:46,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 23:20:20] 2025-12-15 04:19:46,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 23:20:20] 2025-12-15 04:19:46,079 | INFO     | fitting pss+swap vs Time
[2025-12-14 23:20:20] 2025-12-15 04:19:46,084 | INFO     | sum of square deviations: 25346942009.578278
[2025-12-14 23:20:20] 2025-12-15 04:19:46,094 | INFO     | sum of deviations: 91699181385.81097
[2025-12-14 23:20:20] 2025-12-15 04:19:46,094 | INFO     | mean x: 1765759123.2603686
[2025-12-14 23:20:20] 2025-12-15 04:19:46,095 | INFO     | mean y: 2491670.930875576
[2025-12-14 23:20:20] 2025-12-15 04:19:46,095 | INFO     | intersect: -6385603037.547811
[2025-12-14 23:20:20] 2025-12-15 04:19:46,100 | INFO     | chi2: 4.949737789423853
[2025-12-14 23:20:20] 2025-12-15 04:19:46,101 | INFO     | sum of square deviations: 24480955233.22149
[2025-12-14 23:20:20] 2025-12-15 04:19:46,105 | INFO     | sum of deviations: 146150348497.6388
[2025-12-14 23:20:20] 2025-12-15 04:19:46,105 | INFO     | mean x: 1765758970.7645688
[2025-12-14 23:20:20] 2025-12-15 04:19:46,105 | INFO     | mean y: 2501190.8578088577
[2025-12-14 23:20:20] 2025-12-15 04:19:46,106 | INFO     | intersect: -10539011036.976707
[2025-12-14 23:20:20] 2025-12-15 04:19:46,106 | INFO     | chi2: 3.5305635884730084
[2025-12-14 23:20:20] 2025-12-15 04:19:46,106 | INFO     | current chi2=3.5305635884730084 (change=28.671704670562676 %)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,107 | INFO     | sum of square deviations: 23634895906.884422
[2025-12-14 23:20:20] 2025-12-15 04:19:46,123 | INFO     | sum of deviations: 143838355045.20755
[2025-12-14 23:20:20] 2025-12-15 04:19:46,134 | INFO     | mean x: 1765758818.2665095
[2025-12-14 23:20:20] 2025-12-15 04:19:46,134 | INFO     | mean y: 2500774.113207547
[2025-12-14 23:20:20] 2025-12-15 04:19:46,134 | INFO     | intersect: -10743636836.420689
[2025-12-14 23:20:20] 2025-12-15 04:19:46,135 | INFO     | chi2: 3.5316551141782737
[2025-12-14 23:20:20] 2025-12-15 04:19:46,136 | INFO     | current chi2=3.5316551141782737 (change=-0.030916472056444808 %)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,136 | INFO     | right removable region: 423
[2025-12-14 23:20:20] 2025-12-15 04:19:46,137 | INFO     | sum of square deviations: 24480806514.154034
[2025-12-14 23:20:20] 2025-12-15 04:19:46,157 | INFO     | sum of deviations: -27974916688.692326
[2025-12-14 23:20:20] 2025-12-15 04:19:46,157 | INFO     | mean x: 1765759275.7692308
[2025-12-14 23:20:20] 2025-12-15 04:19:46,157 | INFO     | mean y: 2512711.5384615385
[2025-12-14 23:20:20] 2025-12-15 04:19:46,157 | INFO     | intersect: 2020296259.7794132
[2025-12-14 23:20:20] 2025-12-15 04:19:46,158 | INFO     | chi2: 2.0941879880835153
[2025-12-14 23:20:20] 2025-12-15 04:19:46,159 | INFO     | current chi2=2.0941879880835153 (change=57.69093076893519 %)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,159 | INFO     | sum of square deviations: 23634651172.71461
[2025-12-14 23:20:20] 2025-12-15 04:19:46,181 | INFO     | sum of deviations: -69333721805.08493
[2025-12-14 23:20:20] 2025-12-15 04:19:46,182 | INFO     | mean x: 1765759428.2759433
[2025-12-14 23:20:20] 2025-12-15 04:19:46,182 | INFO     | mean y: 2520144.462264151
[2025-12-14 23:20:20] 2025-12-15 04:19:46,182 | INFO     | intersect: 5182485445.415275
[2025-12-14 23:20:20] 2025-12-15 04:19:46,183 | INFO     | chi2: 1.6878154068489883
[2025-12-14 23:20:20] 2025-12-15 04:19:46,183 | INFO     | current chi2=1.6878154068489883 (change=19.404780446974897 %)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,183 | INFO     | left removable region: 20
[2025-12-14 23:20:20] 2025-12-15 04:19:46,192 | INFO     | sum of square deviations: 20293728805.31491
[2025-12-14 23:20:20] 2025-12-15 04:19:46,206 | INFO     | sum of deviations: -44561711579.870964
[2025-12-14 23:20:20] 2025-12-15 04:19:46,206 | INFO     | mean x: 1765759397.796526
[2025-12-14 23:20:20] 2025-12-15 04:19:46,206 | INFO     | mean y: 2536015.806451613
[2025-12-14 23:20:20] 2025-12-15 04:19:46,206 | INFO     | intersect: 3879855051.59882
[2025-12-14 23:20:20] 2025-12-15 04:19:46,207 | INFO     | chi2: 0.11582829847224665
[2025-12-14 23:20:20] 2025-12-15 04:19:46,216 | INFO     | current memory leak: -2.20 B/s (using 403 data points, chi2=0.12)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,217 | INFO     | could have reported an average CPU frequency of 2508 MHz (18 samples)
[2025-12-14 23:20:20] 2025-12-15 04:19:46,217 | INFO     | ..............................
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . Timing measurements:
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . get job = 0 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . initial setup = 7 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . payload setup = 43 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . stage-in = 0 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . payload execution = 26458 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,218 | INFO     | . stage-out = 5 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,219 | INFO     | . log creation = 0 s
[2025-12-14 23:20:20] 2025-12-15 04:19:46,219 | INFO     | ..............................
[2025-12-14 23:20:20] 2025-12-15 04:19:47,018 | INFO     | 
[2025-12-14 23:20:20] 2025-12-15 04:19:47,018 | INFO     | job summary report
[2025-12-14 23:20:20] 2025-12-15 04:19:47,018 | INFO     | --------------------------------------------------
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | PanDA job id: 6929438276
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | task id: 47898763
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | errors: (none)
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | pilot state: finished 
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | transexitcode: 0
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | exeerrorcode: 0
[2025-12-14 23:20:20] 2025-12-15 04:19:47,019 | INFO     | exeerrordiag: 
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | exitcode: 0
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | exitmsg: OK
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | cpuconsumptiontime: 80345 s
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | nevents: 400
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | neventsw: 0
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | pid: 1948584
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | pgrp: 1948584
[2025-12-14 23:20:20] 2025-12-15 04:19:47,020 | INFO     | corecount: 8
[2025-12-14 23:20:20] 2025-12-15 04:19:47,021 | INFO     | event service: False
[2025-12-14 23:20:20] 2025-12-15 04:19:47,021 | INFO     | sizes: {0: 2283125, 1: 2283810, 2: 2283838, 3: 2284037, 14: 2284037, 25: 2284065, 36: 2284221, 39: 2284511, 47: 2284539, 26506: 2320995, 26507: 2320994, 26514: 233
[2025-12-14 23:20:20] 2025-12-15 04:19:47,021 | INFO     | --------------------------------------------------
[2025-12-14 23:20:20] 2025-12-15 04:19:47,021 | INFO     | 
[2025-12-14 23:20:20] 2025-12-15 04:19:47,021 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 23:20:20] 2025-12-15 04:19:47,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 23:20:20] 2025-12-15 04:19:47,134 | INFO     | job 6929438276 has completed (purged errors)
[2025-12-14 23:20:20] 2025-12-15 04:19:47,134 | INFO     | overall cleanup function is called
[2025-12-14 23:20:20] 2025-12-15 04:19:48,144 | INFO     | --- collectZombieJob: --- 10, [1948584]
[2025-12-14 23:20:20] 2025-12-15 04:19:48,144 | INFO     | zombie collector waiting for pid 1948584
[2025-12-14 23:20:20] 2025-12-15 04:19:48,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 23:20:20] 2025-12-15 04:19:48,144 | INFO     | collected zombie processes
[2025-12-14 23:20:20] 2025-12-15 04:19:48,144 | INFO     | will attempt to kill all subprocesses of pid=1948584
[2025-12-14 23:20:20] 2025-12-15 04:19:50,889 | INFO     | process IDs to be killed: [1948584] (in reverse order)
[2025-12-14 23:20:20] 2025-12-15 04:19:51,047 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 23:20:20] 2025-12-15 04:19:51,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 23:20:20] 2025-12-15 04:19:51,147 | INFO     | did not find any defunct processes belonging to 1948584
[2025-12-14 23:20:20] 2025-12-15 04:19:51,246 | INFO     | did not find any defunct processes belonging to 1948584
[2025-12-14 23:20:20] 2025-12-15 04:19:51,246 | INFO     | ready for new job
[2025-12-14 23:20:20] 2025-12-15 04:19:51,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 23:20:20] 2025-12-15 04:19:51,276 | INFO     | ***************************************
[2025-12-14 23:20:20] 2025-12-15 04:19:51,276 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 23:20:20] 2025-12-15 04:19:51,277 | INFO     | ***************************************
[2025-12-14 23:20:20] 2025-12-15 04:19:51,277 | INFO     | 
[2025-12-14 23:20:20] 2025-12-15 04:19:51,314 | INFO     | architecture information:
[2025-12-14 23:20:20] 2025-12-15 04:19:51,351 | INFO     | executing command: cat /etc/os-release
[2025-12-14 23:20:20] 2025-12-15 04:19:51,406 | INFO     | cat /etc/os-release:
[2025-12-14 23:20:20] NAME="CentOS Linux"
[2025-12-14 23:20:20] VERSION="7 (Core)"
[2025-12-14 23:20:20] ID="centos"
[2025-12-14 23:20:20] ID_LIKE="rhel fedora"
[2025-12-14 23:20:20] VERSION_ID="7"
[2025-12-14 23:20:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 23:20:20] ANSI_COLOR="0;31"
[2025-12-14 23:20:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 23:20:20] HOME_URL="https://www.centos.org/"
[2025-12-14 23:20:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 23:20:20] 
[2025-12-14 23:20:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 23:20:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 23:20:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 23:20:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 23:20:20] 
[2025-12-14 23:20:20] 2025-12-15 04:19:51,406 | INFO     | ***************************************
[2025-12-14 23:20:20] 2025-12-15 04:19:51,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 23:20:20] 2025-12-15 04:19:51,973 | INFO     | sufficient remaining disk space (63329796096 B)
[2025-12-14 23:20:20] 2025-12-15 04:19:51,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 23:20:20] 2025-12-15 04:19:51,974 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 23:20:20] 2025-12-15 04:19:51,974 | INFO     | update_server=False
[2025-12-14 23:20:20] 2025-12-15 04:19:51,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 23:20:20] 2025-12-15 04:19:51,980 | INFO     | all payload control threads have been joined
[2025-12-14 23:20:20] 2025-12-15 04:19:52,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:20:20] 2025-12-15 04:19:52,011 | INFO     | aborting loop
[2025-12-14 23:20:20] 2025-12-15 04:19:52,104 | INFO     | all data control threads have been joined
[2025-12-14 23:20:20] 2025-12-15 04:19:52,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:20:20] 2025-12-15 04:19:52,717 | INFO     | all job control threads have been joined
[2025-12-14 23:20:20] 2025-12-15 04:19:52,982 | INFO     | [job] retrieve thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:52,986 | INFO     | [payload] control thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,020 | INFO     | [job] job monitor thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,111 | INFO     | [data] control thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,120 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,126 | INFO     | [job] queue monitor thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 23:20:20] 2025-12-15 04:19:53,723 | INFO     | [job] control thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,732 | INFO     | [payload] failed_post thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,810 | INFO     | [data] copytool_in thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,880 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,913 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:53,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 23:20:20] 2025-12-15 04:19:53,978 | INFO     | [job] validate thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:54,094 | INFO     | [payload] validate_post thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:54,448 | INFO     | [monitor] cgroup control has ended
[2025-12-14 23:20:20] 2025-12-15 04:19:55,476 | INFO     | [data] copytool_out thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:57,985 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 23:20:20] 2025-12-15 04:19:58,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227185026880)>', '<ExcThread(monitor, started 140226236241664)>']
[2025-12-14 23:20:20] 2025-12-15 04:20:03,799 | INFO     | all workflow threads have been joined
[2025-12-14 23:20:20] 2025-12-15 04:20:03,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 23:20:20] 2025-12-15 04:20:03,799 | INFO     | traces error code: 0
[2025-12-14 23:20:20] 2025-12-15 04:20:03,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 23:20:20] 2025-12-15 04:20:19,767 | INFO     | PID=1940616 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 23:20:20] 2025-12-15 04:20:19,767 | INFO     | .. there are 9 such processes running
[2025-12-14 23:20:20] 2025-12-15 04:20:19,768 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 23:20:20] 2025-12-15 04:20:19,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 23:20:20] 2025-12-15 04:20:19,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 23:20:20] 2025-12-15 04:20:19,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 23:20:20] 2025-12-15 04:20:19,768 | INFO     | [monitor] control thread has ended
[2025-12-14 23:20:20] 2025-12-15 04:20:20,175 [wrapper] ==== pilot stdout END ====
[2025-12-14 23:20:20] 2025-12-15 04:20:20,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 23:20:20] 2025-12-15 04:20:20,230 [wrapper] pilotpid: 1940616
[2025-12-14 23:20:20] 2025-12-15 04:20:20,270 [wrapper] Pilot exit status: 0
[2025-12-14 23:20:20] 2025-12-15 04:20:20,342 [wrapper] pandaids: 6929438276
[2025-12-14 23:20:20] 2025-12-15 04:20:20,448 [wrapper] cleanup supervisor_pilot 2535797 1940617
[2025-12-14 23:20:20] 2025-12-15 04:20:20,464 [wrapper] Test setup, not cleaning
[2025-12-14 23:20:20] 2025-12-15 04:20:20,480 [wrapper] apfmon messages muted
[2025-12-14 23:20:20] 2025-12-15 04:20:20,509 [wrapper] ==== wrapper stdout END ====
[2025-12-14 23:20:20] 2025-12-15 04:20:20,527 [wrapper] ==== wrapper stderr END ====
[2025-12-14 23:20:20]  *** Error codes and diagnostics ***
[2025-12-14 23:20:20]     "exeErrorCode": 0,
[2025-12-14 23:20:20]     "exeErrorDiag": "",
[2025-12-14 23:20:20]     "pilotErrorCode": 0,
[2025-12-14 23:20:20]     "pilotErrorDiag": "",
[2025-12-14 23:20:20]  *** Listing of results directory ***
[2025-12-14 23:20:20] total 445232
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 03:33 pilot3.tar.gz
[2025-12-14 23:20:20] -rwx------. 1 boincer umatlas     36322 Dec 14 03:37 runpilot2-wrapper.sh
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 03:39 queuedata.json
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas       100 Dec 14 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 23:20:20] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 15:54 run_atlas
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas       105 Dec 14 15:54 job.xml
[2025-12-14 23:20:20] -rw-r--r--. 2 boincer umatlas 223496851 Dec 14 15:54 EVNT.47898761._000398.pool.root.1
[2025-12-14 23:20:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 15:54 start_atlas.sh
[2025-12-14 23:20:20] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 15:54 shared
[2025-12-14 23:20:20] -rw-r--r--. 2 boincer umatlas    592397 Dec 14 15:54 input.tar.gz
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas         0 Dec 14 15:54 boinc_lockfile
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas      2505 Dec 14 15:54 pandaJob.out
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas        57 Dec 14 15:54 setup.sh.local
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas    991024 Dec 14 15:56 agis_schedconf.cvmfs.json
[2025-12-14 23:20:20] drwx------. 5 boincer umatlas      4096 Dec 14 15:56 pilot3
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas      6613 Dec 14 23:09 init_data.xml
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas 220478708 Dec 14 23:17 HITS.47898763._009936.pool.root.1
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas       531 Dec 14 23:17 boinc_task_state.xml
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas      1043 Dec 14 23:19 memory_monitor_summary.json
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas   1516240 Dec 14 23:19 agis_ddmendpoints.agis.ALL.json
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas    614077 Dec 14 23:19 log.47898763._009936.job.log.tgz.1
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas        95 Dec 14 23:19 pilot_heartbeat.json
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas      7820 Dec 14 23:19 heartbeat.json
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 23:19 boinc_mmap_file
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas        28 Dec 14 23:19 wrapper_checkpoint.txt
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas       822 Dec 14 23:20 pilotlog.txt
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas   3401413 Dec 14 23:20 log.47898763._009936.job.log.1
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas       357 Dec 14 23:20 output.list
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas       620 Dec 14 23:20 runtime_log
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas   4034560 Dec 14 23:20 result.tar.gz
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas      9338 Dec 14 23:20 runtime_log.err
[2025-12-14 23:20:20] -rw-------. 1 boincer umatlas       656 Dec 14 23:20 H4lKDmJmwo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHKVKDmdpz6cn.diag
[2025-12-14 23:20:20] -rw-r--r--. 1 boincer umatlas     21247 Dec 14 23:20 stderr.txt
[2025-12-14 23:20:21] HITS file was successfully produced:
[2025-12-14 23:20:21] -rw-------. 1 boincer umatlas 220478708 Dec 14 23:17 shared/HITS.pool.root.1
[2025-12-14 23:20:21]  *** Contents of shared directory: ***
[2025-12-14 23:20:21] total 438116
[2025-12-14 23:20:21] -rw-r--r--. 2 boincer umatlas 223496851 Dec 14 15:54 ATLAS.root_0
[2025-12-14 23:20:21] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 15:54 start_atlas.sh
[2025-12-14 23:20:21] -rw-r--r--. 2 boincer umatlas    592397 Dec 14 15:54 input.tar.gz
[2025-12-14 23:20:21] -rw-------. 1 boincer umatlas 220478708 Dec 14 23:17 HITS.pool.root.1
[2025-12-14 23:20:21] -rw-------. 1 boincer umatlas   4034560 Dec 14 23:20 result.tar.gz
23:20:22 (1935410): run_atlas exited; CPU time 81205.580024
23:20:22 (1935410): called boinc_finish(0)

</stderr_txt>
]]>

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