Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:40:42 (9489): wrapper (7.7.26015): starting
09:40:42 (9489): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 09:40:42] Arguments: --nthreads 12
[2025-12-14 09:40:42] Threads: 12
[2025-12-14 09:40:42] Checking for CVMFS
[2025-12-14 09:40:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 09:40:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 09:40:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 09:40:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 09:40:43] 2.11.2.0 3103 103709 93784 153998 1 57 17170321 20275200 1 130560 0 45328776 99.930 5438175 33062 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 09:40:43] CVMFS is ok
[2025-12-14 09:40:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 09:40:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 09:40:43] Further information can be found at the LHC@home message board.
[2025-12-14 09:40:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 09:40:43] Checking for apptainer binary...
[2025-12-14 09:40:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 09:40:43] Running /usr/bin/apptainer --version
[2025-12-14 09:40:43] apptainer version 1.3.2-1.el7
[2025-12-14 09:40:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 09:40:44] c-115-41.aglt2.org
[2025-12-14 09:40:44] apptainer works
[2025-12-14 09:40:44] Set ATHENA_PROC_NUMBER=12
[2025-12-14 09:40:44] Set ATHENA_CORE_NUMBER=12
[2025-12-14 09:40:44] Starting ATLAS job with PandaID=6929439946
[2025-12-14 09:40:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 11:14:14]  *** The last 200 lines of the pilot log: ***
[2025-12-14 11:14:14]  status=None
[2025-12-14 11:14:14]  status_code=0
[2025-12-14 11:14:14]  storage_token=
[2025-12-14 11:14:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929439946/log.47898763._010788.job.log.tgz.1
[2025-12-14 11:14:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/be/log.47898763._010788.job.log.tgz.1
[2025-12-14 11:14:14]  workdir=None
[2025-12-14 11:14:14] ]
[2025-12-14 11:14:14] 2025-12-14 16:12:58,496 | INFO     | transferring file log.47898763._010788.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929439946/log.47898763._010788.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 11:14:14] 2025-12-14 16:12:58,496 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929439946/log.47898763._010788.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898763._010788.job
[2025-12-14 11:14:14] 2025-12-14 16:12:58,518 | INFO     | adding to output.list: log.47898763._010788.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/be/log.47898763._010788.job.log.tg
[2025-12-14 11:14:14] 2025-12-14 16:12:58,519 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 11:14:14] 2025-12-14 16:12:58,519 | INFO     | summary of transferred files:
[2025-12-14 11:14:14] 2025-12-14 16:12:58,519 | INFO     |  -- lfn=log.47898763._010788.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 11:14:14] 2025-12-14 16:12:58,520 | INFO     | stage-out finished correctly
[2025-12-14 11:14:14] 2025-12-14 16:12:59,722 | INFO     | monitor loop #412: job 0:6929439946 is in state 'finished'
[2025-12-14 11:14:14] 2025-12-14 16:12:59,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 11:14:14] 2025-12-14 16:12:59,846 | INFO     | time since job start (5520s) is within the limit (174528.0s)
[2025-12-14 11:14:14] 2025-12-14 16:13:01,768 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 11:14:14] 2025-12-14 16:13:01,851 | INFO     | time since job start (5522s) is within the limit (174528.0s)
[2025-12-14 11:14:14] 2025-12-14 16:13:02,226 | INFO     | monitor loop #413: job 0:6929439946 is in state 'finished'
[2025-12-14 11:14:14] 2025-12-14 16:13:02,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 11:14:14] 2025-12-14 16:13:03,857 | INFO     | time since job start (5524s) is within the limit (174528.0s)
[2025-12-14 11:14:14] 2025-12-14 16:13:04,729 | INFO     | monitor loop #414: job 0:6929439946 is in state 'finished'
[2025-12-14 11:14:14] 2025-12-14 16:13:04,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 11:14:14] 2025-12-14 16:13:04,739 | INFO     | job 6929439946 has state=finished
[2025-12-14 11:14:14] 2025-12-14 16:13:04,739 | INFO     | preparing for final server update for job 6929439946 in state='finished'
[2025-12-14 11:14:14] 2025-12-14 16:13:04,740 | INFO     | this job has now completed (state=finished)
[2025-12-14 11:14:14] 2025-12-14 16:13:04,740 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 11:14:14] 2025-12-14 16:13:04,740 | INFO     | log transfer has been attempted: DONE
[2025-12-14 11:14:14] 2025-12-14 16:13:04,740 | INFO     | job 6929439946 has finished - writing final server update
[2025-12-14 11:14:14] 2025-12-14 16:13:04,741 | INFO     | total number of processed events: 400 (read)
[2025-12-14 11:14:14] 2025-12-14 16:13:04,741 | INFO     | executing command: lscpu
[2025-12-14 11:14:14] 2025-12-14 16:13:04,766 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 11:14:14] 2025-12-14 16:13:05,862 | INFO     | time since job start (5526s) is within the limit (174528.0s)
[2025-12-14 11:14:14] 2025-12-14 16:13:07,233 | INFO     | monitor loop #415: job 0:6929439946 is in state 'finished'
[2025-12-14 11:14:14] 2025-12-14 16:13:07,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 11:14:14] 2025-12-14 16:13:07,868 | INFO     | time since job start (5528s) is within the limit (174528.0s)
[2025-12-14 11:14:14] 2025-12-14 16:13:08,985 | INFO     | PID=13194 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 11:14:14] 2025-12-14 16:13:09,405 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 11:14:14] 2025-12-14 16:13:09,408 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-12-14 11:14:14] 2025-12-14 16:13:09,410 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929439946/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 11:14:14] 2025-12-14 16:13:09,411 | INFO     | extracted standard info from prmon json
[2025-12-14 11:14:14] 2025-12-14 16:13:09,411 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 11:14:14] 2025-12-14 16:13:09,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 11:14:14] 2025-12-14 16:13:09,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 11:14:14] 2025-12-14 16:13:09,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 11:14:14] 2025-12-14 16:13:09,414 | INFO     | fitting pss+swap vs Time
[2025-12-14 11:14:14] 2025-12-14 16:13:09,414 | INFO     | sum of square deviations: 177275882.0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,414 | INFO     | sum of deviations: -9195517956.0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,414 | INFO     | mean x: 1765726094.0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,415 | INFO     | mean y: 2762317.265060241
[2025-12-14 11:14:14] 2025-12-14 16:13:09,415 | INFO     | intersect: 91593145733.06859
[2025-12-14 11:14:14] 2025-12-14 16:13:09,415 | INFO     | chi2: 0.06949511306607221
[2025-12-14 11:14:14] 2025-12-14 16:13:09,415 | INFO     | current memory leak: -51.87 B/s (using 83 data points, chi2=0.07)
[2025-12-14 11:14:14] 2025-12-14 16:13:09,415 | INFO     | could have reported an average CPU frequency of 2104 MHz (7 samples)
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | ..............................
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . Timing measurements:
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . get job = 0 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . initial setup = 2 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . payload setup = 6 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . stage-in = 0 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . payload execution = 5490 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,416 | INFO     | . stage-out = 0 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,417 | INFO     | . log creation = 0 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,417 | INFO     | ..............................
[2025-12-14 11:14:14] 2025-12-14 16:13:09,489 | INFO     | 
[2025-12-14 11:14:14] 2025-12-14 16:13:09,490 | INFO     | job summary report
[2025-12-14 11:14:14] 2025-12-14 16:13:09,490 | INFO     | --------------------------------------------------
[2025-12-14 11:14:14] 2025-12-14 16:13:09,490 | INFO     | PanDA job id: 6929439946
[2025-12-14 11:14:14] 2025-12-14 16:13:09,490 | INFO     | task id: 47898763
[2025-12-14 11:14:14] 2025-12-14 16:13:09,490 | INFO     | errors: (none)
[2025-12-14 11:14:14] 2025-12-14 16:13:09,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 11:14:14] 2025-12-14 16:13:09,491 | INFO     | pilot state: finished 
[2025-12-14 11:14:14] 2025-12-14 16:13:09,491 | INFO     | transexitcode: 0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,491 | INFO     | exeerrorcode: 0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,491 | INFO     | exeerrordiag: 
[2025-12-14 11:14:14] 2025-12-14 16:13:09,491 | INFO     | exitcode: 0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | exitmsg: OK
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | cpuconsumptiontime: 60436 s
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | nevents: 400
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | neventsw: 0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | pid: 19608
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | pgrp: 19608
[2025-12-14 11:14:14] 2025-12-14 16:13:09,492 | INFO     | corecount: 12
[2025-12-14 11:14:14] 2025-12-14 16:13:09,493 | INFO     | event service: False
[2025-12-14 11:14:14] 2025-12-14 16:13:09,493 | INFO     | sizes: {0: 2283956, 5: 2284218, 11: 2284274, 5501: 2310829, 5503: 2319827, 5506: 2319883, 5514: 2320205}
[2025-12-14 11:14:14] 2025-12-14 16:13:09,493 | INFO     | --------------------------------------------------
[2025-12-14 11:14:14] 2025-12-14 16:13:09,493 | INFO     | 
[2025-12-14 11:14:14] 2025-12-14 16:13:09,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 11:14:14] 2025-12-14 16:13:09,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 11:14:14] 2025-12-14 16:13:09,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,521 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 11:14:14] 2025-12-14 16:13:09,522 | INFO     | job 6929439946 has completed (purged errors)
[2025-12-14 11:14:14] 2025-12-14 16:13:09,522 | INFO     | overall cleanup function is called
[2025-12-14 11:14:14] 2025-12-14 16:13:10,530 | INFO     | --- collectZombieJob: --- 10, [19608]
[2025-12-14 11:14:14] 2025-12-14 16:13:10,530 | INFO     | zombie collector waiting for pid 19608
[2025-12-14 11:14:14] 2025-12-14 16:13:10,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 11:14:14] 2025-12-14 16:13:10,530 | INFO     | collected zombie processes
[2025-12-14 11:14:14] 2025-12-14 16:13:10,531 | INFO     | will attempt to kill all subprocesses of pid=19608
[2025-12-14 11:14:14] 2025-12-14 16:13:10,622 | INFO     | process IDs to be killed: [19608] (in reverse order)
[2025-12-14 11:14:14] 2025-12-14 16:13:10,674 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 11:14:14] 2025-12-14 16:13:10,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 11:14:14] 2025-12-14 16:13:10,678 | INFO     | did not find any defunct processes belonging to 19608
[2025-12-14 11:14:14] 2025-12-14 16:13:10,681 | INFO     | did not find any defunct processes belonging to 19608
[2025-12-14 11:14:14] 2025-12-14 16:13:10,681 | INFO     | ready for new job
[2025-12-14 11:14:14] 2025-12-14 16:13:10,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 11:14:14] 2025-12-14 16:13:10,682 | INFO     | ***************************************
[2025-12-14 11:14:14] 2025-12-14 16:13:10,682 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 11:14:14] 2025-12-14 16:13:10,682 | INFO     | ***************************************
[2025-12-14 11:14:14] 2025-12-14 16:13:10,682 | INFO     | 
[2025-12-14 11:14:14] 2025-12-14 16:13:10,683 | INFO     | architecture information:
[2025-12-14 11:14:14] 2025-12-14 16:13:10,683 | INFO     | executing command: cat /etc/os-release
[2025-12-14 11:14:14] 2025-12-14 16:13:10,698 | INFO     | cat /etc/os-release:
[2025-12-14 11:14:14] NAME="CentOS Linux"
[2025-12-14 11:14:14] VERSION="7 (Core)"
[2025-12-14 11:14:14] ID="centos"
[2025-12-14 11:14:14] ID_LIKE="rhel fedora"
[2025-12-14 11:14:14] VERSION_ID="7"
[2025-12-14 11:14:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 11:14:14] ANSI_COLOR="0;31"
[2025-12-14 11:14:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 11:14:14] HOME_URL="https://www.centos.org/"
[2025-12-14 11:14:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 11:14:14] 
[2025-12-14 11:14:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 11:14:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 11:14:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 11:14:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 11:14:14] 
[2025-12-14 11:14:14] 2025-12-14 16:13:10,699 | INFO     | ***************************************
[2025-12-14 11:14:14] 2025-12-14 16:13:11,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 11:14:14] 2025-12-14 16:13:11,218 | INFO     | sufficient remaining disk space (18529386496 B)
[2025-12-14 11:14:14] 2025-12-14 16:13:11,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 11:14:14] 2025-12-14 16:13:11,219 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 11:14:14] 2025-12-14 16:13:11,219 | INFO     | update_server=False
[2025-12-14 11:14:14] 2025-12-14 16:13:11,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 11:14:14] 2025-12-14 16:13:11,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 11:14:14] 2025-12-14 16:13:11,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 11:14:14] 2025-12-14 16:13:11,220 | INFO     | aborting loop
[2025-12-14 11:14:14] 2025-12-14 16:13:11,579 | INFO     | all data control threads have been joined
[2025-12-14 11:14:14] 2025-12-14 16:13:11,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 11:14:14] 2025-12-14 16:13:11,618 | INFO     | all payload control threads have been joined
[2025-12-14 11:14:14] 2025-12-14 16:13:12,225 | INFO     | [job] retrieve thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,225 | INFO     | [job] queue monitor thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,226 | INFO     | [job] job monitor thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,283 | INFO     | [payload] validate_post thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 11:14:14] 2025-12-14 16:13:12,504 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,543 | INFO     | [data] copytool_in thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,584 | INFO     | [data] control thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,623 | INFO     | [payload] control thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:12,646 | INFO     | all job control threads have been joined
[2025-12-14 11:14:14] 2025-12-14 16:13:13,326 | INFO     | [payload] failed_post thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:13,351 | INFO     | [job] validate thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:13,404 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:13,618 | INFO     | [data] copytool_out thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:13,651 | INFO     | [job] control thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:13,695 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:16,359 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:21,597 | INFO     | job.realtimelogging is not enabled
[2025-12-14 11:14:14] 2025-12-14 16:13:22,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 11:14:14] 2025-12-14 16:13:41,183 | INFO     | PID=13194 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 11:14:14] 2025-12-14 16:13:41,184 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 11:14:14] 2025-12-14 16:13:41,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 11:14:14] 2025-12-14 16:13:41,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 11:14:14] 2025-12-14 16:14:07,732 | INFO     | [monitor] cgroup control has ended
[2025-12-14 11:14:14] 2025-12-14 16:14:09,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711616653120)>', '<ExcThread(monitor, started 140710879672064)>']
[2025-12-14 11:14:14] 2025-12-14 16:14:09,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 11:14:14] 2025-12-14 16:14:09,317 | INFO     | [monitor] control thread has ended
[2025-12-14 11:14:14] 2025-12-14 16:14:14,275 | INFO     | all workflow threads have been joined
[2025-12-14 11:14:14] 2025-12-14 16:14:14,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 11:14:14] 2025-12-14 16:14:14,278 | INFO     | traces error code: 0
[2025-12-14 11:14:14] 2025-12-14 16:14:14,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 11:14:14] 2025-12-14 16:14:14,376 [wrapper] ==== pilot stdout END ====
[2025-12-14 11:14:14] 2025-12-14 16:14:14,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 11:14:14] 2025-12-14 16:14:14,384 [wrapper] pilotpid: 13194
[2025-12-14 11:14:14] 2025-12-14 16:14:14,387 [wrapper] Pilot exit status: 0
[2025-12-14 11:14:14] 2025-12-14 16:14:14,405 [wrapper] pandaids: 6929439946
[2025-12-14 11:14:14] 2025-12-14 16:14:14,453 [wrapper] cleanup supervisor_pilot 30904 13195
[2025-12-14 11:14:14] 2025-12-14 16:14:14,456 [wrapper] Test setup, not cleaning
[2025-12-14 11:14:14] 2025-12-14 16:14:14,460 [wrapper] apfmon messages muted
[2025-12-14 11:14:14] 2025-12-14 16:14:14,464 [wrapper] ==== wrapper stdout END ====
[2025-12-14 11:14:14] 2025-12-14 16:14:14,468 [wrapper] ==== wrapper stderr END ====
[2025-12-14 11:14:14]  *** Error codes and diagnostics ***
[2025-12-14 11:14:14]     "exeErrorCode": 0,
[2025-12-14 11:14:14]     "exeErrorDiag": "",
[2025-12-14 11:14:14]     "pilotErrorCode": 0,
[2025-12-14 11:14:14]     "pilotErrorDiag": "",
[2025-12-14 11:14:14]  *** Listing of results directory ***
[2025-12-14 11:14:14] total 444756
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 03:33 pilot3.tar.gz
[2025-12-14 11:14:14] -rwx------ 1 boincer umatlas     36322 Dec 14 03:37 runpilot2-wrapper.sh
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 03:40 queuedata.json
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas       100 Dec 14 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 11:14:14] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 09:40 run_atlas
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas       105 Dec 14 09:40 job.xml
[2025-12-14 11:14:14] -rw-r--r-- 2 boincer umatlas 227066739 Dec 14 09:40 EVNT.47898761._000482.pool.root.1
[2025-12-14 11:14:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 09:40 start_atlas.sh
[2025-12-14 11:14:14] drwxrwx--x 2 boincer umatlas      4096 Dec 14 09:40 shared
[2025-12-14 11:14:14] -rw-r--r-- 2 boincer umatlas    592400 Dec 14 09:40 input.tar.gz
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas         0 Dec 14 09:40 boinc_lockfile
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas      2506 Dec 14 09:40 pandaJob.out
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas        57 Dec 14 09:40 setup.sh.local
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas    991024 Dec 14 09:40 agis_schedconf.cvmfs.json
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas   1516240 Dec 14 09:40 agis_ddmendpoints.agis.ALL.json
[2025-12-14 11:14:14] drwx------ 5 boincer umatlas      4096 Dec 14 09:40 pilot3
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas       529 Dec 14 11:12 boinc_task_state.xml
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas 222070862 Dec 14 11:12 HITS.47898763._010788.pool.root.1
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas      1046 Dec 14 11:12 memory_monitor_summary.json
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas    397283 Dec 14 11:12 log.47898763._010788.job.log.tgz.1
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas      7862 Dec 14 11:13 heartbeat.json
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 11:13 init_data.xml
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas        95 Dec 14 11:13 pilot_heartbeat.json
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 11:13 boinc_mmap_file
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas        27 Dec 14 11:13 wrapper_checkpoint.txt
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas      4818 Dec 14 11:14 pilotlog.txt
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas    792155 Dec 14 11:14 log.47898763._010788.job.log.1
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas       357 Dec 14 11:14 output.list
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas       620 Dec 14 11:14 runtime_log
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas   1208320 Dec 14 11:14 result.tar.gz
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 11:14 runtime_log.err
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas       659 Dec 14 11:14 oLzNDmTmwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma7QKDmnPDkgn.diag
[2025-12-14 11:14:14] -rw-r--r-- 1 boincer umatlas     22149 Dec 14 11:14 stderr.txt
[2025-12-14 11:14:14] HITS file was successfully produced:
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas 222070862 Dec 14 11:12 shared/HITS.pool.root.1
[2025-12-14 11:14:14]  *** Contents of shared directory: ***
[2025-12-14 11:14:14] total 440396
[2025-12-14 11:14:14] -rw-r--r-- 2 boincer umatlas 227066739 Dec 14 09:40 ATLAS.root_0
[2025-12-14 11:14:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 09:40 start_atlas.sh
[2025-12-14 11:14:14] -rw-r--r-- 2 boincer umatlas    592400 Dec 14 09:40 input.tar.gz
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas 222070862 Dec 14 11:12 HITS.pool.root.1
[2025-12-14 11:14:14] -rw------- 1 boincer umatlas   1208320 Dec 14 11:14 result.tar.gz
11:14:16 (9489): run_atlas exited; CPU time 60395.017219
11:14:16 (9489): called boinc_finish(0)

</stderr_txt>
]]>

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