Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:18:22 (9982): wrapper (7.7.26015): starting
21:18:22 (9982): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 21:18:22] Arguments: --nthreads 8
[2025-12-14 21:18:22] Threads: 8
[2025-12-14 21:18:22] Checking for CVMFS
[2025-12-14 21:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 21:18:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 21:18:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 21:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 21:18:23] 2.11.2.0 8605 111763 126612 154007 0 211 17127644 25165825 4162 130560 38 35102117 99.792 27072208 1917 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 21:18:23] CVMFS is ok
[2025-12-14 21:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 21:18:23] Checking for apptainer binary...
[2025-12-14 21:18:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 21:18:23] Running /usr/bin/apptainer --version
[2025-12-14 21:18:23] apptainer version 1.3.2-1.el7
[2025-12-14 21:18:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 21:18:25] cg-vwn213.simple-grid.lan
[2025-12-14 21:18:25] apptainer works
[2025-12-14 21:18:25] Set ATHENA_PROC_NUMBER=8
[2025-12-14 21:18:25] Set ATHENA_CORE_NUMBER=8
[2025-12-14 21:18:25] Starting ATLAS job with PandaID=6929439168
[2025-12-14 21:18:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 03:23:35]  *** The last 200 lines of the pilot log: ***
[2025-12-15 03:23:35] 2025-12-15 02:22:25,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 03:23:35] 2025-12-15 02:22:25,999 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-15 03:23:35] 2025-12-15 02:22:26,000 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-15 03:23:35] 2025-12-15 02:22:26,011 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6929439168/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,012 | INFO     | extracted standard info from prmon json
[2025-12-15 03:23:35] 2025-12-15 02:22:26,012 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 03:23:35] 2025-12-15 02:22:26,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 03:23:35] 2025-12-15 02:22:26,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 03:23:35] 2025-12-15 02:22:26,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 03:23:35] 2025-12-15 02:22:26,019 | INFO     | fitting pss+swap vs Time
[2025-12-15 03:23:35] 2025-12-15 02:22:26,020 | INFO     | sum of square deviations: 13755764892.5
[2025-12-15 03:23:35] 2025-12-15 02:22:26,024 | INFO     | sum of deviations: 49832166421.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,024 | INFO     | mean x: 1765754427.5
[2025-12-15 03:23:35] 2025-12-15 02:22:26,024 | INFO     | mean y: 2493848.5197740113
[2025-12-15 03:23:35] 2025-12-15 02:22:26,024 | INFO     | intersect: -6394196497.487285
[2025-12-15 03:23:35] 2025-12-15 02:22:26,025 | INFO     | chi2: 5.964857725656695
[2025-12-15 03:23:35] 2025-12-15 02:22:26,025 | INFO     | sum of square deviations: 13181084350.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,033 | INFO     | sum of deviations: 72967998577.99998
[2025-12-15 03:23:35] 2025-12-15 02:22:26,033 | INFO     | mean x: 1765754275.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,033 | INFO     | mean y: 2499916.770773639
[2025-12-15 03:23:35] 2025-12-15 02:22:26,033 | INFO     | intersect: -9772382938.54586
[2025-12-15 03:23:35] 2025-12-15 02:22:26,034 | INFO     | chi2: 5.228710136630612
[2025-12-15 03:23:35] 2025-12-15 02:22:26,034 | INFO     | current chi2=5.228710136630612 (change=12.34141069047942 %)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,034 | INFO     | right removable region: 348
[2025-12-15 03:23:35] 2025-12-15 02:22:26,035 | INFO     | sum of square deviations: 13181084350.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,039 | INFO     | sum of deviations: -71894625986.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,039 | INFO     | mean x: 1765754580.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,039 | INFO     | mean y: 2526125.452722063
[2025-12-15 03:23:35] 2025-12-15 02:22:26,039 | INFO     | intersect: 9633620331.459114
[2025-12-15 03:23:35] 2025-12-15 02:22:26,040 | INFO     | chi2: 1.5706299920477702
[2025-12-15 03:23:35] 2025-12-15 02:22:26,040 | INFO     | current chi2=1.5706299920477702 (change=73.66860930660583 %)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,041 | INFO     | sum of square deviations: 12622636670.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,045 | INFO     | sum of deviations: -103968773655.49998
[2025-12-15 03:23:35] 2025-12-15 02:22:26,045 | INFO     | mean x: 1765754732.5
[2025-12-15 03:23:35] 2025-12-15 02:22:26,045 | INFO     | mean y: 2534831.520348837
[2025-12-15 03:23:35] 2025-12-15 02:22:26,045 | INFO     | intersect: 14546513155.06188
[2025-12-15 03:23:35] 2025-12-15 02:22:26,046 | INFO     | chi2: 1.0372605638364067
[2025-12-15 03:23:35] 2025-12-15 02:22:26,046 | INFO     | current chi2=1.0372605638364067 (change=33.95894837815762 %)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,046 | INFO     | sum of square deviations: 12080189290.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,050 | INFO     | sum of deviations: -102294664188.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,050 | INFO     | mean x: 1765754885.0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,051 | INFO     | mean y: 2534346.1769911502
[2025-12-15 03:23:35] 2025-12-15 02:22:26,051 | INFO     | intersect: 14954891355.095646
[2025-12-15 03:23:35] 2025-12-15 02:22:26,051 | INFO     | chi2: 1.0238220394011712
[2025-12-15 03:23:35] 2025-12-15 02:22:26,051 | INFO     | current chi2=1.0238220394011712 (change=1.2955784596236708 %)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,052 | INFO     | left removable region: 30
[2025-12-15 03:23:35] 2025-12-15 02:22:26,052 | INFO     | sum of square deviations: 9971385099.5
[2025-12-15 03:23:35] 2025-12-15 02:22:26,056 | INFO     | sum of deviations: -47480059765.5
[2025-12-15 03:23:35] 2025-12-15 02:22:26,056 | INFO     | mean x: 1765755159.5
[2025-12-15 03:23:35] 2025-12-15 02:22:26,056 | INFO     | mean y: 2531964.676100629
[2025-12-15 03:23:35] 2025-12-15 02:22:26,056 | INFO     | intersect: 8410407066.050324
[2025-12-15 03:23:35] 2025-12-15 02:22:26,057 | INFO     | chi2: 0.19521958977123685
[2025-12-15 03:23:35] 2025-12-15 02:22:26,057 | INFO     | current memory leak: -4.76 B/s (using 318 data points, chi2=0.20)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,058 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,063 | INFO     | ..............................
[2025-12-15 03:23:35] 2025-12-15 02:22:26,063 | INFO     | . Timing measurements:
[2025-12-15 03:23:35] 2025-12-15 02:22:26,063 | INFO     | . get job = 0 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,063 | INFO     | . initial setup = 1 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,063 | INFO     | . payload setup = 15 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,064 | INFO     | . stage-in = 0 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,064 | INFO     | . payload execution = 21667 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,064 | INFO     | . stage-out = 4 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,064 | INFO     | . log creation = 1 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,064 | INFO     | ..............................
[2025-12-15 03:23:35] 2025-12-15 02:22:26,230 | INFO     | 
[2025-12-15 03:23:35] 2025-12-15 02:22:26,230 | INFO     | job summary report
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | --------------------------------------------------
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | PanDA job id: 6929439168
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | task id: 47898763
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | errors: (none)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | pilot state: finished 
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | transexitcode: 0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | exeerrorcode: 0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | exeerrordiag: 
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | exitcode: 0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | exitmsg: OK
[2025-12-15 03:23:35] 2025-12-15 02:22:26,231 | INFO     | cpuconsumptiontime: 79658 s
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | nevents: 400
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | neventsw: 0
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | pid: 20242
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | pgrp: 20242
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | corecount: 8
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | event service: False
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | sizes: {0: 2283786, 1: 2283985, 10: 2284247, 12: 2284275, 21687: 2317593, 21692: 2326591, 21693: 2326775, 21797: 2326969}
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | --------------------------------------------------
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | 
[2025-12-15 03:23:35] 2025-12-15 02:22:26,232 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 03:23:35] 2025-12-15 02:22:26,623 | INFO     | job 6929439168 has completed (purged errors)
[2025-12-15 03:23:35] 2025-12-15 02:22:26,623 | INFO     | overall cleanup function is called
[2025-12-15 03:23:35] 2025-12-15 02:22:27,632 | INFO     | --- collectZombieJob: --- 10, [20242]
[2025-12-15 03:23:35] 2025-12-15 02:22:27,632 | INFO     | zombie collector waiting for pid 20242
[2025-12-15 03:23:35] 2025-12-15 02:22:27,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 03:23:35] 2025-12-15 02:22:27,632 | INFO     | collected zombie processes
[2025-12-15 03:23:35] 2025-12-15 02:22:27,632 | INFO     | will attempt to kill all subprocesses of pid=20242
[2025-12-15 03:23:35] 2025-12-15 02:22:27,736 | INFO     | process IDs to be killed: [20242] (in reverse order)
[2025-12-15 03:23:35] 2025-12-15 02:22:28,417 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 03:23:35] 2025-12-15 02:22:28,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 03:23:35] 2025-12-15 02:22:28,425 | INFO     | did not find any defunct processes belonging to 20242
[2025-12-15 03:23:35] 2025-12-15 02:22:28,428 | INFO     | did not find any defunct processes belonging to 20242
[2025-12-15 03:23:35] 2025-12-15 02:22:28,429 | INFO     | ready for new job
[2025-12-15 03:23:35] 2025-12-15 02:22:28,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 03:23:35] 2025-12-15 02:22:28,432 | INFO     | ***************************************
[2025-12-15 03:23:35] 2025-12-15 02:22:28,432 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 03:23:35] 2025-12-15 02:22:28,432 | INFO     | ***************************************
[2025-12-15 03:23:35] 2025-12-15 02:22:28,432 | INFO     | 
[2025-12-15 03:23:35] 2025-12-15 02:22:28,433 | INFO     | pilot is running in a VM
[2025-12-15 03:23:35] 2025-12-15 02:22:28,433 | INFO     | architecture information:
[2025-12-15 03:23:35] 2025-12-15 02:22:28,439 | INFO     | executing command: cat /etc/os-release
[2025-12-15 03:23:35] 2025-12-15 02:22:28,558 | INFO     | cat /etc/os-release:
[2025-12-15 03:23:35] NAME="CentOS Linux"
[2025-12-15 03:23:35] VERSION="7 (Core)"
[2025-12-15 03:23:35] ID="centos"
[2025-12-15 03:23:35] ID_LIKE="rhel fedora"
[2025-12-15 03:23:35] VERSION_ID="7"
[2025-12-15 03:23:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 03:23:35] ANSI_COLOR="0;31"
[2025-12-15 03:23:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 03:23:35] HOME_URL="https://www.centos.org/"
[2025-12-15 03:23:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 03:23:35] 
[2025-12-15 03:23:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 03:23:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 03:23:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 03:23:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 03:23:35] 
[2025-12-15 03:23:35] 2025-12-15 02:22:28,559 | INFO     | ***************************************
[2025-12-15 03:23:35] 2025-12-15 02:22:29,062 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-12-15 03:23:35] 2025-12-15 02:22:29,135 | INFO     | sufficient remaining disk space (493739835392 B)
[2025-12-15 03:23:35] 2025-12-15 02:22:29,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 03:23:35] 2025-12-15 02:22:29,136 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 03:23:35] 2025-12-15 02:22:29,136 | INFO     | update_server=False
[2025-12-15 03:23:35] 2025-12-15 02:22:29,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 03:23:35] 2025-12-15 02:22:29,152 | INFO     | all data control threads have been joined
[2025-12-15 03:23:35] 2025-12-15 02:22:29,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:23:35] 2025-12-15 02:22:29,509 | INFO     | aborting loop
[2025-12-15 03:23:35] 2025-12-15 02:22:29,586 | INFO     | all job control threads have been joined
[2025-12-15 03:23:35] 2025-12-15 02:22:29,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 03:23:35] 2025-12-15 02:22:29,722 | INFO     | all payload control threads have been joined
[2025-12-15 03:23:35] 2025-12-15 02:22:30,142 | INFO     | [job] retrieve thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,158 | INFO     | [data] control thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,515 | INFO     | [job] job monitor thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,592 | INFO     | [job] control thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,600 | INFO     | [payload] failed_post thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,637 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,645 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,664 | INFO     | [job] validate thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,728 | INFO     | [payload] control thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:30,786 | INFO     | [data] copytool_in thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:31,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:23:35] 2025-12-15 02:22:31,465 | INFO     | [payload] validate_post thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:31,635 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:31,671 | INFO     | [data] copytool_out thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:32,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 03:23:35] 2025-12-15 02:22:32,250 | INFO     | [job] queue monitor thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:36,044 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 03:23:35] 2025-12-15 02:22:58,077 | INFO     | PID=13751 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-15 03:23:35] 2025-12-15 02:22:58,078 | INFO     | .. there are 9 such processes running
[2025-12-15 03:23:35] 2025-12-15 02:22:58,079 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 03:23:35] 2025-12-15 02:22:58,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 03:23:35] 2025-12-15 02:22:58,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 03:23:35] 2025-12-15 02:23:23,520 | INFO     | [monitor] cgroup control has ended
[2025-12-15 03:23:35] 2025-12-15 02:23:24,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453292537664)>', '<ExcThread(monitor, started 140452854482688)>']
[2025-12-15 03:23:35] 2025-12-15 02:23:25,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 03:23:35] 2025-12-15 02:23:25,241 | INFO     | [monitor] control thread has ended
[2025-12-15 03:23:35] 2025-12-15 02:23:29,750 | INFO     | all workflow threads have been joined
[2025-12-15 03:23:35] 2025-12-15 02:23:29,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 03:23:35] 2025-12-15 02:23:29,750 | INFO     | traces error code: 0
[2025-12-15 03:23:35] 2025-12-15 02:23:29,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 03:23:35] 2025-12-15 02:23:30,138 [wrapper] ==== pilot stdout END ====
[2025-12-15 03:23:35] 2025-12-15 02:23:30,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 03:23:35] 2025-12-15 02:23:30,383 [wrapper] pilotpid: 13751
[2025-12-15 03:23:35] 2025-12-15 02:23:30,491 [wrapper] Pilot exit status: 0
[2025-12-15 03:23:35] 2025-12-15 02:23:30,960 [wrapper] pandaids: 6929439168
[2025-12-15 03:23:35] 2025-12-15 02:23:32,057 [wrapper] cleanup supervisor_pilot 21807 13752
[2025-12-15 03:23:35] 2025-12-15 02:23:32,154 [wrapper] Test setup, not cleaning
[2025-12-15 03:23:35] 2025-12-15 02:23:32,266 [wrapper] apfmon messages muted
[2025-12-15 03:23:35] 2025-12-15 02:23:32,357 [wrapper] ==== wrapper stdout END ====
[2025-12-15 03:23:35] 2025-12-15 02:23:32,437 [wrapper] ==== wrapper stderr END ====
[2025-12-15 03:23:35]  *** Error codes and diagnostics ***
[2025-12-15 03:23:35]     "exeErrorCode": 0,
[2025-12-15 03:23:35]     "exeErrorDiag": "",
[2025-12-15 03:23:35]     "pilotErrorCode": 0,
[2025-12-15 03:23:35]     "pilotErrorDiag": "",
[2025-12-15 03:23:35]  *** Listing of results directory ***
[2025-12-15 03:23:35] total 444860
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc    579449 Dec 14 09:33 pilot3.tar.gz
[2025-12-15 03:23:35] -rwx------. 1 boinc boinc     36322 Dec 14 09:37 runpilot2-wrapper.sh
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc      5112 Dec 14 09:39 queuedata.json
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc       100 Dec 14 21:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 03:23:35] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 21:18 run_atlas
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc       105 Dec 14 21:18 job.xml
[2025-12-15 03:23:35] -rw-r--r--. 2 boinc boinc 226405093 Dec 14 21:18 EVNT.47898761._000444.pool.root.1
[2025-12-15 03:23:35] -rw-r--r--. 2 boinc boinc     15847 Dec 14 21:18 start_atlas.sh
[2025-12-15 03:23:35] drwxrwx--x. 2 boinc boinc        68 Dec 14 21:18 shared
[2025-12-15 03:23:35] -rw-r--r--. 2 boinc boinc    592394 Dec 14 21:18 input.tar.gz
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc      6392 Dec 14 21:18 init_data.xml
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc         0 Dec 14 21:18 boinc_lockfile
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc      2507 Dec 14 21:18 pandaJob.out
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc    991024 Dec 14 21:18 agis_schedconf.cvmfs.json
[2025-12-15 03:23:35] drwx------. 5 boinc boinc      4096 Dec 14 21:18 pilot3
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc 218267614 Dec 15 03:19 HITS.47898763._010470.pool.root.1
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc       531 Dec 15 03:19 boinc_task_state.xml
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc      1020 Dec 15 03:20 memory_monitor_summary.json
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc   1516240 Dec 15 03:20 agis_ddmendpoints.agis.ALL.json
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc    564643 Dec 15 03:20 log.47898763._010470.job.log.tgz.1
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc      7780 Dec 15 03:22 heartbeat.json
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc        95 Dec 15 03:22 pilot_heartbeat.json
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc        28 Dec 15 03:23 wrapper_checkpoint.txt
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc      8192 Dec 15 03:23 boinc_mmap_file
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc      4884 Dec 15 03:23 pilotlog.txt
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc   2921446 Dec 15 03:23 log.47898763._010470.job.log.1
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc       357 Dec 15 03:23 output.list
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc       620 Dec 15 03:23 runtime_log
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc   3502080 Dec 15 03:23 result.tar.gz
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc      8817 Dec 15 03:23 runtime_log.err
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc       658 Dec 15 03:23 EEyKDmJmwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmd5QKDmC1GIFo.diag
[2025-12-15 03:23:35] -rw-r--r--. 1 boinc boinc     20744 Dec 15 03:23 stderr.txt
[2025-12-15 03:23:35] HITS file was successfully produced:
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc 218267614 Dec 15 03:19 shared/HITS.pool.root.1
[2025-12-15 03:23:35]  *** Contents of shared directory: ***
[2025-12-15 03:23:35] total 438268
[2025-12-15 03:23:35] -rw-r--r--. 2 boinc boinc 226405093 Dec 14 21:18 ATLAS.root_0
[2025-12-15 03:23:35] -rw-r--r--. 2 boinc boinc     15847 Dec 14 21:18 start_atlas.sh
[2025-12-15 03:23:35] -rw-r--r--. 2 boinc boinc    592394 Dec 14 21:18 input.tar.gz
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc 218267614 Dec 15 03:19 HITS.pool.root.1
[2025-12-15 03:23:35] -rw-------. 1 boinc boinc   3502080 Dec 15 03:23 result.tar.gz
03:23:37 (9982): run_atlas exited; CPU time 79966.622972
03:23:37 (9982): called boinc_finish(0)

</stderr_txt>
]]>

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