Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-14 15:10:23 (8928): vboxwrapper version 26210
2025-12-14 15:10:23 (8928): BOINC client version: 8.2.8
2025-12-14 15:10:24 (8928): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-12-14 15:10:24 (8928): Successfully copied 'init_data.xml' to the shared directory.
2025-12-14 15:10:25 (8928): Create VM. (boinc_97b8008b0b977212, slot#0)
2025-12-14 15:10:25 (8928): Setting Memory Size for VM. (4300MB)
2025-12-14 15:10:25 (8928): Setting CPU Count for VM. (3)
2025-12-14 15:10:26 (8928): Setting Chipset Options for VM.
2025-12-14 15:10:26 (8928): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-14 15:10:26 (8928): Setting Boot Options for VM.
2025-12-14 15:10:27 (8928): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-14 15:10:27 (8928): Enabling VM Network Access.
2025-12-14 15:10:27 (8928): Disabling USB Support for VM.
2025-12-14 15:10:28 (8928): Disabling COM Port Support for VM.
2025-12-14 15:10:28 (8928): Disabling LPT Port Support for VM.
2025-12-14 15:10:28 (8928): Disabling Audio Support for VM.
2025-12-14 15:10:28 (8928): Disabling Clipboard Support for VM.
2025-12-14 15:10:29 (8928): Disabling Drag and Drop Support for VM.
2025-12-14 15:10:29 (8928): Adding storage controller(s) to VM.
2025-12-14 15:10:29 (8928): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-14 15:10:31 (8928): Adding VirtualBox Guest Additions to VM.
2025-12-14 15:10:32 (8928): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-14 15:10:32 (8928): forwarding host port 62404 to guest port 80
2025-12-14 15:10:32 (8928): Enabling remote desktop for VM.
2025-12-14 15:10:33 (8928): Enabling shared directory for VM.
2025-12-14 15:10:33 (8928): Starting VM using VBoxManage interface. (boinc_97b8008b0b977212, slot#0)
2025-12-14 15:10:42 (8928): Successfully started VM. (PID = '3724')
2025-12-14 15:10:42 (8928): Reporting VM Process ID to BOINC.
2025-12-14 15:10:42 (8928): Guest Log: BIOS: VirtualBox 7.1.6
2025-12-14 15:10:42 (8928): Guest Log: CPUID EDX: 0x178bfbff
2025-12-14 15:10:42 (8928): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-14 15:10:42 (8928): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-14 15:10:42 (8928): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-14 15:10:42 (8928): Detected: Web Application Enabled (http://localhost:62404)
2025-12-14 15:10:42 (8928): Detected: Remote Desktop Enabled (localhost:62405)
2025-12-14 15:10:42 (8928): Preference change detected
2025-12-14 15:10:42 (8928): Setting CPU throttle for VM. (100%)
2025-12-14 15:10:42 (8928): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-14 15:10:44 (8928): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-14 15:10:44 (8928): Guest Log: BIOS: Booting from Hard Disk...
2025-12-14 15:10:48 (8928): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-14 15:10:48 (8928): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-14 15:10:48 (8928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-14 15:10:54 (8928): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-14 15:10:54 (8928): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-14 15:11:09 (8928): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000339 main     Log opened 2025-12-14T15:11:07.502574000Z
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000592 main     OS Product: Linux
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000669 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000748 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000812 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000815 main     Process ID: 1313
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.000817 main     Package type: LINUX_64BITS_GENERIC
2025-12-14 15:11:09 (8928): Guest Log: 00:00:00.002997 main     5.2.32 r132073 started. Verbose level = 0
2025-12-14 15:11:09 (8928): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-14 15:11:09 (8928): Guest Log: [INFO] Mounting shared directory
2025-12-14 15:11:09 (8928): Guest Log: [INFO] Checking for init_data.xml
2025-12-14 15:11:19 (8928): Guest Log: 00:00:10.007566 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 700 865 000ns (GuestNow=1 765 721 478 807 351 000 ns GuestLast=1 765 725 067 508 216 000 ns fSetTimeLastLoop=true )
2025-12-14 15:12:06 (8928): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-14 15:12:06 (8928): Guest Log: [INFO] Detected branch: prod
2025-12-14 15:12:06 (8928): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-14 15:12:06 (8928): Guest Log: Copying input files
2025-12-14 15:12:09 (8928): Guest Log: Copied input files into RunAtlas.
2025-12-14 15:12:09 (8928): Guest Log: Detected user-configured HTTP proxy at http://10.10.35.150:3128 - will set in /etc/cvmfs/default.local
2025-12-14 15:13:00 (8928): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-14 15:13:00 (8928): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-14 15:13:00 (8928): Guest Log: 2.6.3.0 1607 0 29808 153998 4 1 3120734 4096000 0 65024 0 0 n/a 1335 2184 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.10.35.150:3128 1
2025-12-14 15:13:02 (8928): Guest Log: copied the webapp to /var/www
2025-12-14 15:13:02 (8928): Guest Log: ATHENA_PROC_NUMBER=3
2025-12-14 15:13:02 (8928): Guest Log: ATHENA_CORE_NUMBER=3
2025-12-14 15:13:02 (8928): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-14 15:13:02 (8928): Guest Log:  *** Starting ATLAS job. (PandaID=6929439207 taskID=47898763) ***
2025-12-14 15:26:31 (8928): Preference change detected
2025-12-14 15:26:31 (8928): Setting CPU throttle for VM. (100%)
2025-12-14 15:26:31 (8928): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-14 16:50:45 (8928): Status Report: Elapsed Time: '6000.000000'
2025-12-14 16:50:45 (8928): Status Report: CPU Time: '10719.656250'
2025-12-14 18:30:48 (8928): Status Report: Elapsed Time: '12000.000000'
2025-12-14 18:30:48 (8928): Status Report: CPU Time: '22925.671875'
2025-12-14 20:10:51 (8928): Status Report: Elapsed Time: '18000.000000'
2025-12-14 20:10:51 (8928): Status Report: CPU Time: '35119.859375'
2025-12-14 21:50:54 (8928): Status Report: Elapsed Time: '24000.000000'
2025-12-14 21:50:54 (8928): Status Report: CPU Time: '47313.671875'
2025-12-14 23:30:57 (8928): Status Report: Elapsed Time: '30000.000000'
2025-12-14 23:30:57 (8928): Status Report: CPU Time: '59515.296875'
2025-12-15 01:11:00 (8928): Status Report: Elapsed Time: '36000.000000'
2025-12-15 01:11:00 (8928): Status Report: CPU Time: '71693.140625'
2025-12-15 02:51:03 (8928): Status Report: Elapsed Time: '42000.000000'
2025-12-15 02:51:03 (8928): Status Report: CPU Time: '83930.484375'
2025-12-15 04:31:06 (8928): Status Report: Elapsed Time: '48000.000000'
2025-12-15 04:31:06 (8928): Status Report: CPU Time: '96069.703125'
2025-12-15 06:11:09 (8928): Status Report: Elapsed Time: '54000.000000'
2025-12-15 06:11:09 (8928): Status Report: CPU Time: '108214.328125'
2025-12-15 07:51:12 (8928): Status Report: Elapsed Time: '60000.000000'
2025-12-15 07:51:12 (8928): Status Report: CPU Time: '120418.437500'
2025-12-15 08:59:02 (8928): Guest Log:  *** Job finished ***
2025-12-15 08:59:02 (8928): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:58:36,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:58:36,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:58:54,000 | INFO     | [monitor] cgroup control has ended
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:58:55,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438335629120)>', '<ExcThread(monitor, started 140437897598720)>']
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:58:55,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:58:55,423 | INFO     | [monitor] control thread has ended
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,537 | INFO     | all workflow threads have been joined
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,537 | INFO     | end of generic workflow (traces error code: 0)
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,538 | INFO     | traces error code: 0
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,702 [wrapper] ==== pilot stdout END ====
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,711 [wrapper] ==== wrapper stdout RESUME ====
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,719 [wrapper] pilotpid: 5982
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,727 [wrapper] Pilot exit status: 0
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,802 [wrapper] pandaids: 6929439207
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,861 [wrapper] cleanup supervisor_pilot 24554 5983
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,870 [wrapper] Test setup, not cleaning
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,878 [wrapper] apfmon messages muted
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,887 [wrapper] ==== wrapper stdout END ====
2025-12-15 08:59:02 (8928): Guest Log: 2025-12-15 07:59:00,896 [wrapper] ==== wrapper stderr END ====
2025-12-15 08:59:02 (8928): Guest Log:  *** Error codes and diagnostics ***
2025-12-15 08:59:02 (8928): Guest Log:     "exeErrorCode": 0,
2025-12-15 08:59:02 (8928): Guest Log:     "exeErrorDiag": "",
2025-12-15 08:59:02 (8928): Guest Log:     "pilotErrorCode": 0,
2025-12-15 08:59:02 (8928): Guest Log:     "pilotErrorDiag": "",
2025-12-15 08:59:02 (8928): Guest Log:  *** Listing of results directory ***
2025-12-15 08:59:02 (8928): Guest Log: total 236264
2025-12-15 08:59:02 (8928): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 14 08:33 pilot3.tar.gz
2025-12-15 08:59:02 (8928): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 14 08:34 runpilot2-wrapper.sh
2025-12-15 08:59:02 (8928): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 14 08:35 queuedata.json
2025-12-15 08:59:02 (8928): Guest Log: -rwxr-xr-x. 1 atlas atlas      8391 Dec 14 14:12 init_data.xml
2025-12-15 08:59:02 (8928): Guest Log: -rwxr-xr-x. 1 atlas atlas    592393 Dec 14 14:12 input.tar.gz
2025-12-15 08:59:02 (8928): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 14 14:12 start_atlas.sh
2025-12-15 08:59:02 (8928): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 14 14:12 EVNT.47898761._000446.pool.root.1 -> /data/./ATLAS.root_0
2025-12-15 08:59:02 (8928): Guest Log: -rw-r--r--. 1 atlas atlas      2506 Dec 14 14:13 pandaJob.out
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas        49 Dec 14 14:13 setup.sh.local
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas    991024 Dec 14 14:13 agis_schedconf.cvmfs.json
2025-12-15 08:59:02 (8928): Guest Log: drwx------. 5 atlas atlas      4096 Dec 14 14:13 pilot3
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas 219414243 Dec 15 07:56 HITS.47898763._010509.pool.root.1
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas      1032 Dec 15 07:57 memory_monitor_summary.json
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 15 07:57 agis_ddmendpoints.agis.ALL.json
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas   1025114 Dec 15 07:57 log.47898763._010509.job.log.tgz.1
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas      7795 Dec 15 07:58 heartbeat.json
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas        95 Dec 15 07:58 pilot_heartbeat.json
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas      4991 Dec 15 07:59 pilotlog.txt
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas   8309907 Dec 15 07:59 log.47898763._010509.job.log.1
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas       357 Dec 15 07:59 output.list
2025-12-15 08:59:02 (8928): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 15 07:59 runtime_log
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas   9359360 Dec 15 07:59 result.tar.gz
2025-12-15 08:59:02 (8928): Guest Log: -rw-r--r--. 1 atlas atlas      9236 Dec 15 07:59 runtime_log.err
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas       666 Dec 15 07:59 ExoLDmwjwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme1QKDmUP01Vo.diag
2025-12-15 08:59:02 (8928): Guest Log: Looking for outputfile HITS.47898763._010509.pool.root.1
2025-12-15 08:59:02 (8928): Guest Log: HITS file was successfully produced
2025-12-15 08:59:02 (8928): Guest Log: -rw-------. 1 atlas atlas 219414243 Dec 15 07:56 /home/atlas/RunAtlas/HITS.47898763._010509.pool.root.1
2025-12-15 08:59:04 (8928): Guest Log: Successfully finished the ATLAS job!
2025-12-15 08:59:04 (8928): Guest Log: Copying the results back to the shared directory!
2025-12-15 08:59:04 (8928): Guest Log:  *** Contents of shared directory: ***
2025-12-15 08:59:04 (8928): Guest Log: total 440524
2025-12-15 08:59:04 (8928): Guest Log: -rwxrwxrwx. 1 root root 221697263 Dec 14 14:10 ATLAS.root_0
2025-12-15 08:59:04 (8928): Guest Log: -rwxrwxrwx. 1 root root 219414243 Dec 15 07:59 HITS.pool.root.1
2025-12-15 08:59:04 (8928): Guest Log: -rwxrwxrwx. 1 root root      8391 Dec 14 14:10 init_data.xml
2025-12-15 08:59:04 (8928): Guest Log: -rwxrwxrwx. 1 root root    592393 Dec 14 14:09 input.tar.gz
2025-12-15 08:59:04 (8928): Guest Log: -rwxrwxrwx. 1 root root   9359360 Dec 15 07:59 result.tar.gz
2025-12-15 08:59:04 (8928): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 14 14:09 start_atlas.sh
2025-12-15 08:59:04 (8928): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-15 08:59:04 (8928): VM Completion File Detected.
2025-12-15 08:59:04 (8928): Powering off VM.
2025-12-15 08:59:06 (8928): Successfully stopped VM.
2025-12-15 08:59:06 (8928): Deregistering VM. (boinc_97b8008b0b977212, slot#0)
2025-12-15 08:59:06 (8928): Removing network bandwidth throttle group from VM.
2025-12-15 08:59:06 (8928): Removing VM from VirtualBox.
2025-12-15 08:59:11 (8928): called boinc_finish(0)

</stderr_txt>
]]>

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