Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:50:01 (550769): wrapper (7.7.26015): starting
08:50:01 (550769): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 08:50:01] Arguments: --nthreads 8
[2025-12-14 08:50:01] Threads: 8
[2025-12-14 08:50:01] Checking for CVMFS
[2025-12-14 08:50:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 08:50:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 08:50:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 08:50:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 08:50:03] 2.13.2.0 6538 60401 260868 153997 0 468 39510340 40960000 12492 16776704 0 77456455 99.774 48373420 36671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 08:50:03] CVMFS is ok
[2025-12-14 08:50:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 08:50:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 08:50:03] Further information can be found at the LHC@home message board.
[2025-12-14 08:50:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 08:50:03] Checking for apptainer binary...
[2025-12-14 08:50:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 08:50:03] Running /usr/bin/apptainer --version
[2025-12-14 08:50:03] apptainer version 1.4.4-1.el9
[2025-12-14 08:50:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 08:50:04] c-210-31-3.aglt2.org
[2025-12-14 08:50:04] apptainer works
[2025-12-14 08:50:04] Set ATHENA_PROC_NUMBER=8
[2025-12-14 08:50:04] Set ATHENA_CORE_NUMBER=8
[2025-12-14 08:50:04] Starting ATLAS job with PandaID=6929437959
[2025-12-14 08:50:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 12:22:44]  *** The last 200 lines of the pilot log: ***
[2025-12-14 12:22:44] 2025-12-14 17:07:53,334 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2807.2634285714294
[2025-12-14 12:22:44] 2025-12-14 17:07:53,476 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929437959/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,477 | INFO     | extracted standard info from prmon json
[2025-12-14 12:22:44] 2025-12-14 17:07:53,477 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 12:22:44] 2025-12-14 17:07:53,478 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 12:22:44] 2025-12-14 17:07:53,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 12:22:44] 2025-12-14 17:07:53,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 12:22:44] 2025-12-14 17:07:53,669 | INFO     | fitting pss+swap vs Time
[2025-12-14 12:22:44] 2025-12-14 17:07:53,670 | INFO     | sum of square deviations: 2160760951.2984343
[2025-12-14 12:22:44] 2025-12-14 17:07:53,672 | INFO     | sum of deviations: -25868200307.565445
[2025-12-14 12:22:44] 2025-12-14 17:07:53,672 | INFO     | mean x: 1765726189.1727748
[2025-12-14 12:22:44] 2025-12-14 17:07:53,672 | INFO     | mean y: 2493453.1989528798
[2025-12-14 12:22:44] 2025-12-14 17:07:53,672 | INFO     | intersect: 21141416165.768353
[2025-12-14 12:22:44] 2025-12-14 17:07:53,672 | INFO     | chi2: 4.264537935292929
[2025-12-14 12:22:44] 2025-12-14 17:07:53,673 | INFO     | sum of square deviations: 1995435724.284946
[2025-12-14 12:22:44] 2025-12-14 17:07:53,733 | INFO     | sum of deviations: 11643973099.672043
[2025-12-14 12:22:44] 2025-12-14 17:07:53,734 | INFO     | mean x: 1765726036.6505377
[2025-12-14 12:22:44] 2025-12-14 17:07:53,734 | INFO     | mean y: 2527715.7795698927
[2025-12-14 12:22:44] 2025-12-14 17:07:53,734 | INFO     | intersect: -10301019635.772926
[2025-12-14 12:22:44] 2025-12-14 17:07:53,734 | INFO     | chi2: 1.9963322050103611
[2025-12-14 12:22:44] 2025-12-14 17:07:53,735 | INFO     | current chi2=1.9963322050103611 (change=53.187608240299674 %)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,735 | INFO     | sum of square deviations: 1838772684.8176866
[2025-12-14 12:22:44] 2025-12-14 17:07:53,736 | INFO     | sum of deviations: 11300472101.767946
[2025-12-14 12:22:44] 2025-12-14 17:07:53,736 | INFO     | mean x: 1765725884.1325967
[2025-12-14 12:22:44] 2025-12-14 17:07:53,736 | INFO     | mean y: 2527381.259668508
[2025-12-14 12:22:44] 2025-12-14 17:07:53,779 | INFO     | intersect: -10849023904.965977
[2025-12-14 12:22:44] 2025-12-14 17:07:53,780 | INFO     | chi2: 1.9977021148434702
[2025-12-14 12:22:44] 2025-12-14 17:07:53,780 | INFO     | current chi2=1.9977021148434702 (change=-0.06862133615191159 %)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,780 | INFO     | right removable region: 180
[2025-12-14 12:22:44] 2025-12-14 17:07:53,781 | INFO     | sum of square deviations: 1995473368.645167
[2025-12-14 12:22:44] 2025-12-14 17:07:53,782 | INFO     | sum of deviations: -59466708682.64518
[2025-12-14 12:22:44] 2025-12-14 17:07:53,783 | INFO     | mean x: 1765726341.6774194
[2025-12-14 12:22:44] 2025-12-14 17:07:53,783 | INFO     | mean y: 2524122.8225806453
[2025-12-14 12:22:44] 2025-12-14 17:07:53,783 | INFO     | intersect: 52622586922.80637
[2025-12-14 12:22:44] 2025-12-14 17:07:53,841 | INFO     | chi2: 2.5610583225902603
[2025-12-14 12:22:44] 2025-12-14 17:07:53,842 | INFO     | current chi2=2.5610583225902603 (change=39.94523295489591 %)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,842 | INFO     | sum of square deviations: 1838859435.6906028
[2025-12-14 12:22:44] 2025-12-14 17:07:53,844 | INFO     | sum of deviations: -55048780795.453064
[2025-12-14 12:22:44] 2025-12-14 17:07:53,844 | INFO     | mean x: 1765726494.1712706
[2025-12-14 12:22:44] 2025-12-14 17:07:53,844 | INFO     | mean y: 2519769.143646409
[2025-12-14 12:22:44] 2025-12-14 17:07:53,844 | INFO     | intersect: 52861965595.057594
[2025-12-14 12:22:44] 2025-12-14 17:07:53,845 | INFO     | chi2: 2.5485232315833866
[2025-12-14 12:22:44] 2025-12-14 17:07:53,845 | INFO     | current chi2=2.5485232315833866 (change=0.48944965041622945 %)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,845 | INFO     | left removable region: 20
[2025-12-14 12:22:44] 2025-12-14 17:07:53,909 | INFO     | sum of square deviations: 1270171613.2437532
[2025-12-14 12:22:44] 2025-12-14 17:07:53,911 | INFO     | sum of deviations: -799645133.443749
[2025-12-14 12:22:44] 2025-12-14 17:07:53,911 | INFO     | mean x: 1765726463.63125
[2025-12-14 12:22:44] 2025-12-14 17:07:53,911 | INFO     | mean y: 2536307.56875
[2025-12-14 12:22:44] 2025-12-14 17:07:53,911 | INFO     | intersect: 1114161350.1326697
[2025-12-14 12:22:44] 2025-12-14 17:07:53,912 | INFO     | chi2: 0.04915732171855765
[2025-12-14 12:22:44] 2025-12-14 17:07:53,912 | INFO     | current memory leak: -0.63 B/s (using 160 data points, chi2=0.05)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,913 | INFO     | could have reported an average CPU frequency of 2772 MHz (10 samples)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,913 | INFO     | ..............................
[2025-12-14 12:22:44] 2025-12-14 17:07:53,964 | INFO     | time since job start (11807s) is within the limit (174528.0s)
[2025-12-14 12:22:44] 2025-12-14 17:07:53,913 | INFO     | . Timing measurements:
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . get job = 0 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . initial setup = 5 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . payload setup = 35 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . stage-in = 0 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . payload execution = 11667 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . stage-out = 8 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | . log creation = 0 s
[2025-12-14 12:22:44] 2025-12-14 17:07:53,980 | INFO     | ..............................
[2025-12-14 12:22:44] 2025-12-14 17:07:55,381 | INFO     | 
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | job summary report
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | --------------------------------------------------
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | PanDA job id: 6929437959
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | task id: 47898763
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | errors: (none)
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | pilot state: finished 
[2025-12-14 12:22:44] 2025-12-14 17:07:55,382 | INFO     | transexitcode: 0
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | exeerrorcode: 0
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | exeerrordiag: 
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | exitcode: 0
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | exitmsg: OK
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | cpuconsumptiontime: 56945 s
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | nevents: 400
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | neventsw: 0
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | pid: 563734
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | pgrp: 563734
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | corecount: 8
[2025-12-14 12:22:44] 2025-12-14 17:07:55,383 | INFO     | event service: False
[2025-12-14 12:22:44] 2025-12-14 17:07:55,384 | INFO     | sizes: {0: 2283781, 1: 2283980, 13: 2283980, 23: 2284036, 31: 2284326, 34: 2284354, 11707: 2313898, 11708: 2313897, 11719: 2323007, 11746: 2323145}
[2025-12-14 12:22:44] 2025-12-14 17:07:55,384 | INFO     | --------------------------------------------------
[2025-12-14 12:22:44] 2025-12-14 17:07:55,384 | INFO     | 
[2025-12-14 12:22:44] 2025-12-14 17:07:55,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | job 6929437959 has completed (purged errors)
[2025-12-14 12:22:44] 2025-12-14 17:07:55,583 | INFO     | overall cleanup function is called
[2025-12-14 12:22:44] 2025-12-14 17:07:56,659 | INFO     | --- collectZombieJob: --- 10, [563734]
[2025-12-14 12:22:44] 2025-12-14 17:07:56,660 | INFO     | zombie collector waiting for pid 563734
[2025-12-14 12:22:44] 2025-12-14 17:07:56,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 12:22:44] 2025-12-14 17:07:56,660 | INFO     | collected zombie processes
[2025-12-14 12:22:44] 2025-12-14 17:07:56,660 | INFO     | will attempt to kill all subprocesses of pid=563734
[2025-12-14 12:22:44] 2025-12-14 17:07:58,529 | INFO     | PID=555874 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 12:22:44] 2025-12-14 17:07:58,529 | INFO     | .. there are 10 such processes running
[2025-12-14 12:22:44] 2025-12-14 17:07:58,603 | INFO     | process IDs to be killed: [563734] (in reverse order)
[2025-12-14 12:22:44] 2025-12-14 17:07:59,095 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 12:22:44] 2025-12-14 17:07:59,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 12:22:44] 2025-12-14 17:07:59,211 | INFO     | did not find any defunct processes belonging to 563734
[2025-12-14 12:22:44] 2025-12-14 17:07:59,244 | INFO     | did not find any defunct processes belonging to 563734
[2025-12-14 12:22:44] 2025-12-14 17:07:59,244 | INFO     | ready for new job
[2025-12-14 12:22:44] 2025-12-14 17:07:59,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 12:22:44] 2025-12-14 17:07:59,247 | INFO     | ***************************************
[2025-12-14 12:22:44] 2025-12-14 17:07:59,247 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 12:22:44] 2025-12-14 17:07:59,247 | INFO     | ***************************************
[2025-12-14 12:22:44] 2025-12-14 17:07:59,247 | INFO     | 
[2025-12-14 12:22:44] 2025-12-14 17:07:59,255 | INFO     | architecture information:
[2025-12-14 12:22:44] 2025-12-14 17:07:59,259 | INFO     | executing command: cat /etc/os-release
[2025-12-14 12:22:44] 2025-12-14 17:07:59,343 | INFO     | cat /etc/os-release:
[2025-12-14 12:22:44] NAME="CentOS Linux"
[2025-12-14 12:22:44] VERSION="7 (Core)"
[2025-12-14 12:22:44] ID="centos"
[2025-12-14 12:22:44] ID_LIKE="rhel fedora"
[2025-12-14 12:22:44] VERSION_ID="7"
[2025-12-14 12:22:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 12:22:44] ANSI_COLOR="0;31"
[2025-12-14 12:22:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 12:22:44] HOME_URL="https://www.centos.org/"
[2025-12-14 12:22:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 12:22:44] 
[2025-12-14 12:22:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 12:22:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 12:22:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 12:22:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 12:22:44] 
[2025-12-14 12:22:44] 2025-12-14 17:07:59,343 | INFO     | ***************************************
[2025-12-14 12:22:44] 2025-12-14 17:07:59,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 12:22:44] 2025-12-14 17:07:59,918 | INFO     | sufficient remaining disk space (73240936448 B)
[2025-12-14 12:22:44] 2025-12-14 17:07:59,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 12:22:44] 2025-12-14 17:07:59,919 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 12:22:44] 2025-12-14 17:07:59,919 | INFO     | update_server=False
[2025-12-14 12:22:44] 2025-12-14 17:07:59,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 12:22:44] 2025-12-14 17:07:59,919 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 12:22:44] 2025-12-14 17:07:59,920 | INFO     | aborting loop
[2025-12-14 12:22:44] 2025-12-14 17:08:00,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 12:22:44] 2025-12-14 17:08:00,231 | INFO     | all data control threads have been joined
[2025-12-14 12:22:44] 2025-12-14 17:08:00,534 | INFO     | all payload control threads have been joined
[2025-12-14 12:22:44] 2025-12-14 17:08:00,757 | INFO     | all job control threads have been joined
[2025-12-14 12:22:44] 2025-12-14 17:08:00,925 | INFO     | [job] retrieve thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:00,933 | INFO     | [job] job monitor thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,079 | INFO     | [payload] failed_post thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,085 | INFO     | [job] queue monitor thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,184 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 12:22:44] 2025-12-14 17:08:01,238 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,245 | INFO     | [data] control thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,540 | INFO     | [payload] control thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,544 | INFO     | [payload] validate_post thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,767 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,775 | INFO     | [job] control thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,843 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:01,850 | INFO     | [data] copytool_in thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:02,006 | INFO     | [job] validate thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:02,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 12:22:44] 2025-12-14 17:08:03,197 | INFO     | [data] copytool_out thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:06,354 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 12:22:44] 2025-12-14 17:08:27,022 | INFO     | [monitor] cgroup control has ended
[2025-12-14 12:22:44] 2025-12-14 17:08:28,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832258807616)>', '<ExcThread(monitor, started 139831250253568)>']
[2025-12-14 12:22:44] 2025-12-14 17:08:31,351 | INFO     | PID=555874 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 12:22:44] 2025-12-14 17:08:31,352 | INFO     | .. there are 10 such processes running
[2025-12-14 12:22:44] 2025-12-14 17:08:31,353 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 12:22:44] 2025-12-14 17:08:31,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 12:22:44] 2025-12-14 17:08:31,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 12:22:44] 2025-12-14 17:08:31,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 12:22:44] 2025-12-14 17:08:31,354 | INFO     | [monitor] control thread has ended
[2025-12-14 12:22:44] 2025-12-14 17:08:33,914 | INFO     | all workflow threads have been joined
[2025-12-14 12:22:44] 2025-12-14 17:08:33,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 12:22:44] 2025-12-14 17:08:33,915 | INFO     | traces error code: 0
[2025-12-14 12:22:44] 2025-12-14 17:08:33,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 12:22:44] 2025-12-14 17:08:34,159 [wrapper] ==== pilot stdout END ====
[2025-12-14 12:22:44] 2025-12-14 17:08:34,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 12:22:44] 2025-12-14 17:08:34,166 [wrapper] pilotpid: 555874
[2025-12-14 12:22:44] 2025-12-14 17:08:34,169 [wrapper] Pilot exit status: 0
[2025-12-14 12:22:44] 2025-12-14 17:08:34,306 [wrapper] pandaids: 6929437959
[2025-12-14 12:22:44] 2025-12-14 17:08:34,798 [wrapper] cleanup supervisor_pilot  842535 555875
[2025-12-14 12:22:44] 2025-12-14 17:08:34,862 [wrapper] Test setup, not cleaning
[2025-12-14 12:22:44] 2025-12-14 17:08:34,885 [wrapper] apfmon messages muted
[2025-12-14 12:22:44] 2025-12-14 17:08:34,926 [wrapper] ==== wrapper stdout END ====
[2025-12-14 12:22:44] 2025-12-14 17:08:35,140 [wrapper] ==== wrapper stderr END ====
[2025-12-14 12:22:44]  *** Error codes and diagnostics ***
[2025-12-14 12:22:44]     "exeErrorCode": 0,
[2025-12-14 12:22:44]     "exeErrorDiag": "",
[2025-12-14 12:22:44]     "pilotErrorCode": 0,
[2025-12-14 12:22:44]     "pilotErrorDiag": "",
[2025-12-14 12:22:44]  *** Listing of results directory ***
[2025-12-14 12:22:44] total 438488
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 03:33 queuedata.json
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 03:33 pilot3.tar.gz
[2025-12-14 12:22:44] -rwx------. 1 boincer umatlas     36322 Dec 14 03:33 runpilot2-wrapper.sh
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas       100 Dec 14 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 12:22:44] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 08:50 run_atlas
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas       105 Dec 14 08:50 job.xml
[2025-12-14 12:22:44] -rw-r--r--. 2 boincer umatlas 221701173 Dec 14 08:50 EVNT.47898761._000386.pool.root.1
[2025-12-14 12:22:44] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 08:50 start_atlas.sh
[2025-12-14 12:22:44] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 08:50 shared
[2025-12-14 12:22:44] -rw-r--r--. 2 boincer umatlas    592388 Dec 14 08:50 input.tar.gz
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas         0 Dec 14 08:50 boinc_lockfile
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas      2504 Dec 14 08:50 pandaJob.out
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas        57 Dec 14 08:50 setup.sh.local
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas    991736 Dec 14 08:51 agis_schedconf.cvmfs.json
[2025-12-14 12:22:44] drwx------. 5 boincer umatlas      4096 Dec 14 08:51 pilot3
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas 219457636 Dec 14 12:04 HITS.47898763._009635.pool.root.1
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas       531 Dec 14 12:04 boinc_task_state.xml
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas      1043 Dec 14 12:07 memory_monitor_summary.json
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas   1516240 Dec 14 12:07 agis_ddmendpoints.agis.ALL.json
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas    416413 Dec 14 12:07 log.47898763._009635.job.log.tgz.1
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas      7826 Dec 14 12:07 heartbeat.json
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas        95 Dec 14 12:08 pilot_heartbeat.json
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas      4823 Dec 14 12:08 pilotlog.txt
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas   1548718 Dec 14 12:08 log.47898763._009635.job.log.1
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas       357 Dec 14 12:08 output.list
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas       620 Dec 14 12:08 runtime_log
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas   1986560 Dec 14 12:08 result.tar.gz
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas      9353 Dec 14 12:08 runtime_log.err
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas       657 Dec 14 12:08 hnVKDmHjwo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeAVKDmMxqZ9n.diag
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas        28 Dec 14 12:22 wrapper_checkpoint.txt
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas      6843 Dec 14 12:22 init_data.xml
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 12:22 boinc_mmap_file
[2025-12-14 12:22:44] -rw-r--r--. 1 boincer umatlas     21313 Dec 14 12:22 stderr.txt
[2025-12-14 12:22:44] HITS file was successfully produced:
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas 219457636 Dec 14 12:04 shared/HITS.pool.root.1
[2025-12-14 12:22:44]  *** Contents of shared directory: ***
[2025-12-14 12:22:44] total 433364
[2025-12-14 12:22:44] -rw-r--r--. 2 boincer umatlas 221701173 Dec 14 08:50 ATLAS.root_0
[2025-12-14 12:22:44] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 08:50 start_atlas.sh
[2025-12-14 12:22:44] -rw-r--r--. 2 boincer umatlas    592388 Dec 14 08:50 input.tar.gz
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas 219457636 Dec 14 12:04 HITS.pool.root.1
[2025-12-14 12:22:44] -rw-------. 1 boincer umatlas   1986560 Dec 14 12:08 result.tar.gz
12:22:46 (550769): run_atlas exited; CPU time 57218.432019
12:22:46 (550769): called boinc_finish(0)

</stderr_txt>
]]>

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