Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:30:06 (3880311): wrapper (7.7.26015): starting
13:30:06 (3880311): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 13:30:06] Arguments: --nthreads 4
[2025-12-15 13:30:06] Threads: 4
[2025-12-15 13:30:06] Checking for CVMFS
[2025-12-15 13:30:06] No cvmfs_config command found, will try listing directly
[2025-12-15 13:30:06] CVMFS is ok
[2025-12-15 13:30:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 13:30:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 13:30:06] Further information can be found at the LHC@home message board.
[2025-12-15 13:30:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 13:30:06] Checking for apptainer binary...
[2025-12-15 13:30:06] which: no apptainer in ((null))
[2025-12-15 13:30:06] apptainer is not installed, using version from CVMFS
[2025-12-15 13:30:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 13:30:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-15 13:30:07] apptainer works
[2025-12-15 13:30:07] Set ATHENA_PROC_NUMBER=4
[2025-12-15 13:30:07] Set ATHENA_CORE_NUMBER=4
[2025-12-15 13:30:07] Starting ATLAS job with PandaID=6929437929
[2025-12-15 13:30:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 17:33:05]  *** The last 200 lines of the pilot log: ***
[2025-12-15 17:33:05] 2025-12-15 16:22:46,014 | INFO     | extracted standard info from prmon json
[2025-12-15 17:33:05] 2025-12-15 16:22:46,014 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 17:33:05] 2025-12-15 16:22:46,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 17:33:05] 2025-12-15 16:22:46,015 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 17:33:05] 2025-12-15 16:22:46,015 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 17:33:05] 2025-12-15 16:22:46,019 | INFO     | fitting pss+swap vs Time
[2025-12-15 17:33:05] 2025-12-15 16:22:46,019 | INFO     | sum of square deviations: 3675146117.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,021 | INFO     | sum of deviations: 28706725141.5
[2025-12-15 17:33:05] 2025-12-15 16:22:46,021 | INFO     | mean x: 1765808779.5
[2025-12-15 17:33:05] 2025-12-15 16:22:46,021 | INFO     | mean y: 2329905.1271929825
[2025-12-15 17:33:05] 2025-12-15 16:22:46,021 | INFO     | intersect: -13790478781.0571
[2025-12-15 17:33:05] 2025-12-15 16:22:46,022 | INFO     | chi2: 1.2267810165431468
[2025-12-15 17:33:05] 2025-12-15 16:22:46,022 | INFO     | sum of square deviations: 3438620752.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,024 | INFO     | sum of deviations: 27927948358.999996
[2025-12-15 17:33:05] 2025-12-15 16:22:46,024 | INFO     | mean x: 1765808627.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,024 | INFO     | mean y: 2329402.986547085
[2025-12-15 17:33:05] 2025-12-15 16:22:46,024 | INFO     | intersect: -14339296412.552847
[2025-12-15 17:33:05] 2025-12-15 16:22:46,024 | INFO     | chi2: 1.2272695865770817
[2025-12-15 17:33:05] 2025-12-15 16:22:46,025 | INFO     | current chi2=1.2272695865770817 (change=-0.0398253663324276 %)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,025 | INFO     | right removable region: 222
[2025-12-15 17:33:05] 2025-12-15 16:22:46,025 | INFO     | sum of square deviations: 3438620752.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,027 | INFO     | sum of deviations: 3565422916.0000005
[2025-12-15 17:33:05] 2025-12-15 16:22:46,027 | INFO     | mean x: 1765808932.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,027 | INFO     | mean y: 2345893.215246637
[2025-12-15 17:33:05] 2025-12-15 16:22:46,027 | INFO     | intersect: -1828578795.9260135
[2025-12-15 17:33:05] 2025-12-15 16:22:46,027 | INFO     | chi2: 0.006146152971782657
[2025-12-15 17:33:05] 2025-12-15 16:22:46,028 | INFO     | current chi2=0.006146152971782657 (change=99.49900162385123 %)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,028 | INFO     | sum of square deviations: 3212467674.5
[2025-12-15 17:33:05] 2025-12-15 16:22:46,029 | INFO     | sum of deviations: 3555441211.5000033
[2025-12-15 17:33:05] 2025-12-15 16:22:46,030 | INFO     | mean x: 1765809084.5
[2025-12-15 17:33:05] 2025-12-15 16:22:46,030 | INFO     | mean y: 2345911.3073394494
[2025-12-15 17:33:05] 2025-12-15 16:22:46,030 | INFO     | intersect: -1951986716.0706334
[2025-12-15 17:33:05] 2025-12-15 16:22:46,030 | INFO     | chi2: 0.0013001238439416208
[2025-12-15 17:33:05] 2025-12-15 16:22:46,030 | INFO     | current chi2=0.0013001238439416208 (change=78.84654270873888 %)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,031 | INFO     | sum of square deviations: 2996454322.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,032 | INFO     | sum of deviations: 3028594795.000001
[2025-12-15 17:33:05] 2025-12-15 16:22:46,032 | INFO     | mean x: 1765809237.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,032 | INFO     | mean y: 2346282.6901408453
[2025-12-15 17:33:05] 2025-12-15 16:22:46,032 | INFO     | intersect: -1782403321.158859
[2025-12-15 17:33:05] 2025-12-15 16:22:46,033 | INFO     | chi2: 0.001220308911669552
[2025-12-15 17:33:05] 2025-12-15 16:22:46,033 | INFO     | current chi2=0.001220308911669552 (change=6.1390253431620625 %)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,033 | INFO     | left removable region: 30
[2025-12-15 17:33:05] 2025-12-15 16:22:46,033 | INFO     | sum of square deviations: 2194675568.0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,035 | INFO     | sum of deviations: 2476179679.5
[2025-12-15 17:33:05] 2025-12-15 16:22:46,035 | INFO     | mean x: 1765809511.5
[2025-12-15 17:33:05] 2025-12-15 16:22:46,035 | INFO     | mean y: 2346359.203125
[2025-12-15 17:33:05] 2025-12-15 16:22:46,035 | INFO     | intersect: -1989957967.6859424
[2025-12-15 17:33:05] 2025-12-15 16:22:46,035 | INFO     | chi2: 0.001132587489128091
[2025-12-15 17:33:05] 2025-12-15 16:22:46,035 | INFO     | current memory leak: 1.13 B/s (using 192 data points, chi2=0.00)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,036 | INFO     | could have reported an average CPU frequency of 2682 MHz (11 samples)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,036 | INFO     | ..............................
[2025-12-15 17:33:05] 2025-12-15 16:22:46,036 | INFO     | . Timing measurements:
[2025-12-15 17:33:05] 2025-12-15 16:22:46,036 | INFO     | . get job = 0 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,036 | INFO     | . initial setup = 2 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,036 | INFO     | . payload setup = 8 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,037 | INFO     | . stage-in = 0 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,037 | INFO     | . payload execution = 13902 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,037 | INFO     | . stage-out = 1 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,037 | INFO     | . log creation = 0 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,037 | INFO     | ..............................
[2025-12-15 17:33:05] 2025-12-15 16:22:46,138 | INFO     | 
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | job summary report
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | --------------------------------------------------
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | PanDA job id: 6929437929
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | task id: 47898763
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | errors: (none)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 17:33:05] 2025-12-15 16:22:46,139 | INFO     | pilot state: finished 
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | transexitcode: 0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | exeerrorcode: 0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | exeerrordiag: 
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | exitcode: 0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | exitmsg: OK
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | cpuconsumptiontime: 53555 s
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | nevents: 400
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | neventsw: 0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | pid: 3892616
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | pgrp: 3892616
[2025-12-15 17:33:05] 2025-12-15 16:22:46,140 | INFO     | corecount: 4
[2025-12-15 17:33:05] 2025-12-15 16:22:46,141 | INFO     | event service: False
[2025-12-15 17:33:05] 2025-12-15 16:22:46,141 | INFO     | sizes: {0: 2283125, 1: 2283993, 8: 2284255, 12: 2284283, 13915: 2315331, 13916: 2324353, 13917: 2324537, 13926: 2324759}
[2025-12-15 17:33:05] 2025-12-15 16:22:46,141 | INFO     | --------------------------------------------------
[2025-12-15 17:33:05] 2025-12-15 16:22:46,141 | INFO     | 
[2025-12-15 17:33:05] 2025-12-15 16:22:46,141 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-12-15 17:33:05] 2025-12-15 16:22:46,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 17:33:05] 2025-12-15 16:22:46,178 | INFO     | job 6929437929 has completed (purged errors)
[2025-12-15 17:33:05] 2025-12-15 16:22:46,179 | INFO     | overall cleanup function is called
[2025-12-15 17:33:05] 2025-12-15 16:22:46,998 | INFO     | number of running child processes to parent process 3892616: 1
[2025-12-15 17:33:05] 2025-12-15 16:22:46,999 | INFO     | maximum number of monitored processes: 6
[2025-12-15 17:33:05] 2025-12-15 16:22:46,999 | INFO     | aborting job monitoring since job object (job id=6929437929) has expired
[2025-12-15 17:33:05] 2025-12-15 16:22:47,189 | INFO     | --- collectZombieJob: --- 10, [3892616]
[2025-12-15 17:33:05] 2025-12-15 16:22:47,189 | INFO     | zombie collector waiting for pid 3892616
[2025-12-15 17:33:05] 2025-12-15 16:22:47,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 17:33:05] 2025-12-15 16:22:47,189 | INFO     | collected zombie processes
[2025-12-15 17:33:05] 2025-12-15 16:22:47,189 | INFO     | will attempt to kill all subprocesses of pid=3892616
[2025-12-15 17:33:05] 2025-12-15 16:22:48,035 | INFO     | process IDs to be killed: [3892616] (in reverse order)
[2025-12-15 17:33:05] 2025-12-15 16:22:48,312 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 17:33:05] 2025-12-15 16:22:48,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 17:33:05] 2025-12-15 16:22:48,347 | INFO     | did not find any defunct processes belonging to 3892616
[2025-12-15 17:33:05] 2025-12-15 16:22:48,380 | INFO     | did not find any defunct processes belonging to 3892616
[2025-12-15 17:33:05] 2025-12-15 16:22:48,380 | INFO     | ready for new job
[2025-12-15 17:33:05] 2025-12-15 16:22:48,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 17:33:05] 2025-12-15 16:22:48,383 | INFO     | ***************************************
[2025-12-15 17:33:05] 2025-12-15 16:22:48,383 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 17:33:05] 2025-12-15 16:22:48,384 | INFO     | ***************************************
[2025-12-15 17:33:05] 2025-12-15 16:22:48,384 | INFO     | 
[2025-12-15 17:33:05] 2025-12-15 16:22:48,392 | INFO     | architecture information:
[2025-12-15 17:33:05] 2025-12-15 16:22:48,392 | INFO     | executing command: cat /etc/os-release
[2025-12-15 17:33:05] 2025-12-15 16:22:48,420 | INFO     | cat /etc/os-release:
[2025-12-15 17:33:05] NAME="CentOS Linux"
[2025-12-15 17:33:05] VERSION="7 (Core)"
[2025-12-15 17:33:05] ID="centos"
[2025-12-15 17:33:05] ID_LIKE="rhel fedora"
[2025-12-15 17:33:05] VERSION_ID="7"
[2025-12-15 17:33:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 17:33:05] ANSI_COLOR="0;31"
[2025-12-15 17:33:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 17:33:05] HOME_URL="https://www.centos.org/"
[2025-12-15 17:33:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 17:33:05] 
[2025-12-15 17:33:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 17:33:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 17:33:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 17:33:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 17:33:05] 
[2025-12-15 17:33:05] 2025-12-15 16:22:48,421 | INFO     | ***************************************
[2025-12-15 17:33:05] 2025-12-15 16:22:48,923 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-12-15 17:33:05] 2025-12-15 16:22:48,949 | INFO     | sufficient remaining disk space (3299942072320 B)
[2025-12-15 17:33:05] 2025-12-15 16:22:48,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 17:33:05] 2025-12-15 16:22:48,949 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 17:33:05] 2025-12-15 16:22:48,950 | INFO     | update_server=False
[2025-12-15 17:33:05] 2025-12-15 16:22:48,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 17:33:05] 2025-12-15 16:22:48,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 17:33:05] 2025-12-15 16:22:48,951 | INFO     | aborting loop
[2025-12-15 17:33:05] 2025-12-15 16:22:49,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 17:33:05] 2025-12-15 16:22:49,252 | INFO     | all data control threads have been joined
[2025-12-15 17:33:05] 2025-12-15 16:22:49,751 | INFO     | all job control threads have been joined
[2025-12-15 17:33:05] 2025-12-15 16:22:49,954 | INFO     | [job] job monitor thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:49,956 | INFO     | [job] retrieve thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,058 | INFO     | all payload control threads have been joined
[2025-12-15 17:33:05] 2025-12-15 16:22:50,209 | INFO     | [payload] validate_post thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,225 | INFO     | [job] validate thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,226 | INFO     | [data] copytool_in thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,257 | INFO     | [data] control thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,429 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,664 | INFO     | [payload] failed_post thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,670 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,703 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:50,757 | INFO     | [job] control thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:51,021 | INFO     | [data] copytool_out thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:51,063 | INFO     | [payload] control thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:51,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 17:33:05] 2025-12-15 16:22:51,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 17:33:05] 2025-12-15 16:22:52,153 | INFO     | [job] queue monitor thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:55,888 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:22:59,916 | INFO     | job.realtimelogging is not enabled
[2025-12-15 17:33:05] 2025-12-15 16:23:00,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 17:33:05] 2025-12-15 16:23:16,605 | INFO     | 13946s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-15 17:33:05] 2025-12-15 16:23:18,634 | INFO     | PID=3884322 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 17:33:05] 2025-12-15 16:23:18,634 | INFO     | .. there are 8 such processes running
[2025-12-15 17:33:05] 2025-12-15 16:23:18,638 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 17:33:05] 2025-12-15 16:23:18,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 17:33:05] 2025-12-15 16:23:18,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 17:33:05] 2025-12-15 16:23:44,482 | INFO     | [monitor] cgroup control has ended
[2025-12-15 17:33:05] 2025-12-15 16:23:45,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22506993821504)>', '<ExcThread(monitor, started 22506756867840)>']
[2025-12-15 17:33:05] 2025-12-15 16:23:46,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 17:33:05] 2025-12-15 16:23:46,771 | INFO     | [monitor] control thread has ended
[2025-12-15 17:33:05] 2025-12-15 16:23:50,905 | INFO     | all workflow threads have been joined
[2025-12-15 17:33:05] 2025-12-15 16:23:50,905 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 17:33:05] 2025-12-15 16:23:50,905 | INFO     | traces error code: 0
[2025-12-15 17:33:05] 2025-12-15 16:23:50,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 17:33:05] 2025-12-15 16:23:51,079 [wrapper] ==== pilot stdout END ====
[2025-12-15 17:33:05] 2025-12-15 16:23:51,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 17:33:05] 2025-12-15 16:23:51,089 [wrapper] pilotpid: 3884322
[2025-12-15 17:33:05] 2025-12-15 16:23:51,093 [wrapper] Pilot exit status: 0
[2025-12-15 17:33:05] 2025-12-15 16:23:51,108 [wrapper] pandaids: 6929437929
[2025-12-15 17:33:05] 2025-12-15 16:23:51,308 [wrapper] cleanup supervisor_pilot  119925 3884323
[2025-12-15 17:33:05] 2025-12-15 16:23:51,313 [wrapper] Test setup, not cleaning
[2025-12-15 17:33:05] 2025-12-15 16:23:51,317 [wrapper] apfmon messages muted
[2025-12-15 17:33:05] 2025-12-15 16:23:51,321 [wrapper] ==== wrapper stdout END ====
[2025-12-15 17:33:05] 2025-12-15 16:23:51,325 [wrapper] ==== wrapper stderr END ====
[2025-12-15 17:33:05]  *** Error codes and diagnostics ***
[2025-12-15 17:33:05]     "exeErrorCode": 0,
[2025-12-15 17:33:05]     "exeErrorDiag": "",
[2025-12-15 17:33:05]     "pilotErrorCode": 0,
[2025-12-15 17:33:05]     "pilotErrorDiag": "",
[2025-12-15 17:33:05]  *** Listing of results directory ***
[2025-12-15 17:33:05] total 441056
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc      5112 Dec 14 09:33 queuedata.json
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc    579449 Dec 14 09:33 pilot3.tar.gz
[2025-12-15 17:33:05] -rwx------ 1 boinc boinc     36322 Dec 14 09:33 runpilot2-wrapper.sh
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc       100 Dec 15 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 17:33:05] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 13:30 run_atlas
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc       105 Dec 15 13:30 job.xml
[2025-12-15 17:33:05] -rw-r--r-- 2 boinc boinc 223168107 Dec 15 13:30 EVNT.47898761._000385.pool.root.1
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc      6691 Dec 15 13:30 init_data.xml
[2025-12-15 17:33:05] -rw-r--r-- 2 boinc boinc     15847 Dec 15 13:30 start_atlas.sh
[2025-12-15 17:33:05] drwxrwx--x 2 boinc boinc      4096 Dec 15 13:30 shared
[2025-12-15 17:33:05] -rw-r--r-- 2 boinc boinc    592388 Dec 15 13:30 input.tar.gz
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc         0 Dec 15 13:30 boinc_lockfile
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc      2505 Dec 15 13:30 pandaJob.out
[2025-12-15 17:33:05] -rw------- 1 boinc boinc    991012 Dec 15 13:30 agis_schedconf.cvmfs.json
[2025-12-15 17:33:05] drwx------ 5 boinc boinc      4096 Dec 15 13:30 pilot3
[2025-12-15 17:33:05] -rw------- 1 boinc boinc 219923672 Dec 15 17:21 HITS.47898763._009605.pool.root.1
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc       528 Dec 15 17:22 boinc_task_state.xml
[2025-12-15 17:33:05] -rw------- 1 boinc boinc      1024 Dec 15 17:22 memory_monitor_summary.json
[2025-12-15 17:33:05] -rw------- 1 boinc boinc   1516240 Dec 15 17:22 agis_ddmendpoints.agis.ALL.json
[2025-12-15 17:33:05] -rw------- 1 boinc boinc    385445 Dec 15 17:22 log.47898763._009605.job.log.tgz.1
[2025-12-15 17:33:05] -rw------- 1 boinc boinc      7777 Dec 15 17:22 heartbeat.json
[2025-12-15 17:33:05] -rw------- 1 boinc boinc        95 Dec 15 17:23 pilot_heartbeat.json
[2025-12-15 17:33:05] -rw------- 1 boinc boinc      5023 Dec 15 17:23 pilotlog.txt
[2025-12-15 17:33:05] -rw------- 1 boinc boinc   1931521 Dec 15 17:23 log.47898763._009605.job.log.1
[2025-12-15 17:33:05] -rw------- 1 boinc boinc       357 Dec 15 17:23 output.list
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc       620 Dec 15 17:23 runtime_log
[2025-12-15 17:33:05] -rw------- 1 boinc boinc   2334720 Dec 15 17:23 result.tar.gz
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc      9223 Dec 15 17:23 runtime_log.err
[2025-12-15 17:33:05] -rw------- 1 boinc boinc       667 Dec 15 17:23 XDMNDmGjwo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGAVKDmRXUK0m.diag
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc        26 Dec 15 17:32 wrapper_checkpoint.txt
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc      8192 Dec 15 17:33 boinc_mmap_file
[2025-12-15 17:33:05] -rw-r--r-- 1 boinc boinc     20849 Dec 15 17:33 stderr.txt
[2025-12-15 17:33:05] HITS file was successfully produced:
[2025-12-15 17:33:05] -rw------- 1 boinc boinc 219923672 Dec 15 17:21 shared/HITS.pool.root.1
[2025-12-15 17:33:05]  *** Contents of shared directory: ***
[2025-12-15 17:33:05] total 435596
[2025-12-15 17:33:05] -rw-r--r-- 2 boinc boinc 223168107 Dec 15 13:30 ATLAS.root_0
[2025-12-15 17:33:05] -rw-r--r-- 2 boinc boinc     15847 Dec 15 13:30 start_atlas.sh
[2025-12-15 17:33:05] -rw-r--r-- 2 boinc boinc    592388 Dec 15 13:30 input.tar.gz
[2025-12-15 17:33:05] -rw------- 1 boinc boinc 219923672 Dec 15 17:21 HITS.pool.root.1
[2025-12-15 17:33:05] -rw------- 1 boinc boinc   2334720 Dec 15 17:23 result.tar.gz
17:33:06 (3880311): run_atlas exited; CPU time 54526.292937
17:33:06 (3880311): called boinc_finish(0)

</stderr_txt>
]]>

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