Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:50:46 (456172): wrapper (7.7.26015): starting
05:50:46 (456172): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 05:50:46] Arguments: --nthreads 8
[2025-12-14 05:50:46] Threads: 8
[2025-12-14 05:50:46] Checking for CVMFS
[2025-12-14 05:50:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 05:50:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 05:50:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 05:50:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 05:50:47] 2.11.3.0 3753445 19295 360996 153997 2 482 38119435 45568000 14405 130560 0 67391626 99.659 64467647 17741 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 05:50:47] CVMFS is ok
[2025-12-14 05:50:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 05:50:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 05:50:47] Further information can be found at the LHC@home message board.
[2025-12-14 05:50:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 05:50:47] Checking for apptainer binary...
[2025-12-14 05:50:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 05:50:47] Running /usr/bin/apptainer --version
[2025-12-14 05:50:47] apptainer version 1.4.1-1.el9
[2025-12-14 05:50:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 05:50:48] wns0010.triumf.lcg
[2025-12-14 05:50:48] apptainer works
[2025-12-14 05:50:49] Set ATHENA_PROC_NUMBER=8
[2025-12-14 05:50:49] Set ATHENA_CORE_NUMBER=8
[2025-12-14 05:50:49] Starting ATLAS job with PandaID=6929437823
[2025-12-14 05:50:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 05:56:44]  *** The last 200 lines of the pilot log: ***
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | WARNING  | wrong length of table data, x=[1765720392.0], y=[1375.0] (must be same and length>=4)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | ..............................
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | . Timing measurements:
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | . get job = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . initial setup = 5 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . payload setup = 30 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . stage-in = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . payload execution = 65 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . stage-out = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . log creation = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | ..............................
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929437823/pilotlog.txt
[2025-12-14 05:56:44] 2025-12-14 13:56:10,118 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 05:56:44] - Log from pilotlog.txt -
[2025-12-14 05:56:44] 2025-12-14 13:56:10,104 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929437823/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | INFO     | extracted standard info from prmon json
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | WARNING  | wrong length of table data, x=[1765720392.0], y=[1375.0] (must be same and length>=4)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | ..............................
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | . Timing measurements:
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | . get job = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . initial setup = 5 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . payload setup = 30 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . stage-in = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . payload execution = 65 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . stage-out = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . log creation = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | ..............................
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929437823/pilotlog.txt
[2025-12-14 05:56:44] 2025-12-14 13:56:10,119 | WARNING  | 
[2025-12-14 05:56:44] [begin log extracts]
[2025-12-14 05:56:44] - Log from pilotlog.txt -
[2025-12-14 05:56:44] 2025-12-14 13:56:10,104 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929437823/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | INFO     | extracted standard info from prmon json
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:56:44] 2025-12-14 13:56:10,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | WARNING  | wrong length of table data, x=[1765720392.0], y=[1375.0] (must be same and length>=4)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | ..............................
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | . Timing measurements:
[2025-12-14 05:56:44] 2025-12-14 13:56:10,106 | INFO     | . get job = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . initial setup = 5 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . payload setup = 30 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . stage-in = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . payload execution = 65 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . stage-out = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | . log creation = 0 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | ..............................
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 05:56:44] 2025-12-14 13:56:10,107 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929437823/pilotlog.txt
[2025-12-14 05:56:44] [end log extracts]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,119 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,120 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 05:56:44] 2025-12-14 13:56:10,187 | INFO     | 
[2025-12-14 05:56:44] 2025-12-14 13:56:10,187 | INFO     | job summary report
[2025-12-14 05:56:44] 2025-12-14 13:56:10,187 | INFO     | --------------------------------------------------
[2025-12-14 05:56:44] 2025-12-14 13:56:10,187 | INFO     | PanDA job id: 6929437823
[2025-12-14 05:56:44] 2025-12-14 13:56:10,187 | INFO     | task id: 47898763
[2025-12-14 05:56:44] 2025-12-14 13:56:10,187 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 05:53:44,226 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | pilot state: failed 
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | transexitcode: 65
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | exeerrorcode: 65
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | exitcode: 65
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | cpuconsumptiontime: 18 s
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | nevents: 0
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | neventsw: 0
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | pid: 466762
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | pgrp: 466762
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | corecount: 8
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | event service: False
[2025-12-14 05:56:44] 2025-12-14 13:56:10,188 | INFO     | sizes: {0: 2283723, 1: 2283978, 2: 2283978, 13: 2284006, 24: 2284062, 30: 2284352, 35: 2284508, 101: 2307837, 102: 2312129, 105: 2312157, 235: 2312323}
[2025-12-14 05:56:44] 2025-12-14 13:56:10,189 | INFO     | --------------------------------------------------
[2025-12-14 05:56:44] 2025-12-14 13:56:10,189 | INFO     | 
[2025-12-14 05:56:44] 2025-12-14 13:56:10,189 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 05:56:44] 2025-12-14 13:56:10,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,248 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,248 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,248 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,250 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 05:56:44] 2025-12-14 13:56:10,250 | INFO     | job 6929437823 has completed (purged errors)
[2025-12-14 05:56:44] 2025-12-14 13:56:10,250 | INFO     | overall cleanup function is called
[2025-12-14 05:56:44] 2025-12-14 13:56:11,268 | INFO     | --- collectZombieJob: --- 10, [466762]
[2025-12-14 05:56:44] 2025-12-14 13:56:11,268 | INFO     | zombie collector waiting for pid 466762
[2025-12-14 05:56:44] 2025-12-14 13:56:11,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 05:56:44] 2025-12-14 13:56:11,268 | INFO     | collected zombie processes
[2025-12-14 05:56:44] 2025-12-14 13:56:11,269 | INFO     | will attempt to kill all subprocesses of pid=466762
[2025-12-14 05:56:44] 2025-12-14 13:56:12,057 | INFO     | process IDs to be killed: [466762] (in reverse order)
[2025-12-14 05:56:44] 2025-12-14 13:56:12,312 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 05:56:44] 2025-12-14 13:56:12,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 05:56:44] 2025-12-14 13:56:12,335 | INFO     | did not find any defunct processes belonging to 466762
[2025-12-14 05:56:44] 2025-12-14 13:56:12,344 | INFO     | did not find any defunct processes belonging to 466762
[2025-12-14 05:56:44] 2025-12-14 13:56:12,344 | INFO     | ready for new job
[2025-12-14 05:56:44] 2025-12-14 13:56:12,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 05:56:44] 2025-12-14 13:56:12,346 | INFO     | ***************************************
[2025-12-14 05:56:44] 2025-12-14 13:56:12,346 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 05:56:44] 2025-12-14 13:56:12,346 | INFO     | ***************************************
[2025-12-14 05:56:44] 2025-12-14 13:56:12,346 | INFO     | 
[2025-12-14 05:56:44] 2025-12-14 13:56:12,348 | INFO     | architecture information:
[2025-12-14 05:56:44] 2025-12-14 13:56:12,348 | INFO     | executing command: cat /etc/os-release
[2025-12-14 05:56:44] 2025-12-14 13:56:12,361 | INFO     | cat /etc/os-release:
[2025-12-14 05:56:44] NAME="CentOS Linux"
[2025-12-14 05:56:44] VERSION="7 (Core)"
[2025-12-14 05:56:44] ID="centos"
[2025-12-14 05:56:44] ID_LIKE="rhel fedora"
[2025-12-14 05:56:44] VERSION_ID="7"
[2025-12-14 05:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 05:56:44] ANSI_COLOR="0;31"
[2025-12-14 05:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 05:56:44] HOME_URL="https://www.centos.org/"
[2025-12-14 05:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 05:56:44] 
[2025-12-14 05:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 05:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 05:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 05:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 05:56:44] 
[2025-12-14 05:56:44] 2025-12-14 13:56:12,361 | INFO     | ***************************************
[2025-12-14 05:56:44] 2025-12-14 13:56:12,874 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 05:56:44] 2025-12-14 13:56:12,914 | INFO     | sufficient remaining disk space (1422471987200 B)
[2025-12-14 05:56:44] 2025-12-14 13:56:12,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 05:56:44] 2025-12-14 13:56:12,915 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 05:56:44] 2025-12-14 13:56:12,916 | INFO     | update_server=False
[2025-12-14 05:56:44] 2025-12-14 13:56:12,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 05:56:44] 2025-12-14 13:56:12,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 05:56:44] 2025-12-14 13:56:13,438 | INFO     | all job control threads have been joined
[2025-12-14 05:56:44] 2025-12-14 13:56:13,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:56:44] 2025-12-14 13:56:13,665 | INFO     | aborting loop
[2025-12-14 05:56:44] 2025-12-14 13:56:13,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 05:56:44] 2025-12-14 13:56:13,822 | INFO     | all data control threads have been joined
[2025-12-14 05:56:44] 2025-12-14 13:56:13,921 | INFO     | [job] retrieve thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,056 | INFO     | [payload] validate_post thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,165 | INFO     | [job] validate thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,269 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,325 | INFO     | all payload control threads have been joined
[2025-12-14 05:56:44] 2025-12-14 13:56:14,444 | INFO     | [job] control thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,588 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,589 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,670 | INFO     | [job] job monitor thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,828 | INFO     | [data] control thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,921 | INFO     | [payload] failed_post thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:14,957 | INFO     | [data] copytool_in thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:15,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:15,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:56:44] 2025-12-14 13:56:15,331 | INFO     | [payload] control thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:15,743 | INFO     | [data] copytool_out thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:16,215 | INFO     | [job] queue monitor thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:16,954 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 05:56:44] 2025-12-14 13:56:23,499 | INFO     | [monitor] cgroup control has ended
[2025-12-14 05:56:44] 2025-12-14 13:56:23,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218669926208)>', '<ExcThread(monitor, started 140217981851392)>']
[2025-12-14 05:56:44] 2025-12-14 13:56:28,802 | INFO     | all workflow threads have been joined
[2025-12-14 05:56:44] 2025-12-14 13:56:28,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 05:56:44] 2025-12-14 13:56:28,803 | INFO     | traces error code: 0
[2025-12-14 05:56:44] 2025-12-14 13:56:28,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 05:56:44] 2025-12-14 13:56:43,524 | INFO     | PID=459926 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 05:56:44] 2025-12-14 13:56:43,524 | INFO     | .. there are 33 such processes running
[2025-12-14 05:56:44] 2025-12-14 13:56:43,525 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 05:56:44] 2025-12-14 13:56:43,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 05:56:44] 2025-12-14 13:56:43,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 05:56:44] 2025-12-14 13:56:43,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 05:56:44] 2025-12-14 13:56:43,525 | CRITICAL | thread 'MainThread' is not alive
[2025-12-14 05:56:44] 2025-12-14 13:56:43,525 | INFO     | [monitor] control thread has ended
[2025-12-14 05:56:44] 2025-12-14 13:56:43,675 [wrapper] ==== pilot stdout END ====
[2025-12-14 05:56:44] 2025-12-14 13:56:43,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 05:56:44] 2025-12-14 13:56:43,734 [wrapper] pilotpid: 459926
[2025-12-14 05:56:44] 2025-12-14 13:56:43,742 [wrapper] Pilot exit status: 0
[2025-12-14 05:56:44] 2025-12-14 13:56:43,778 [wrapper] pandaids: 6929437823
[2025-12-14 05:56:44] 2025-12-14 13:56:43,821 [wrapper] cleanup supervisor_pilot  459932 459927
[2025-12-14 05:56:44] 2025-12-14 13:56:43,824 [wrapper] Test setup, not cleaning
[2025-12-14 05:56:44] 2025-12-14 13:56:43,831 [wrapper] apfmon messages muted
[2025-12-14 05:56:44] 2025-12-14 13:56:43,834 [wrapper] ==== wrapper stdout END ====
[2025-12-14 05:56:44] 2025-12-14 13:56:43,836 [wrapper] ==== wrapper stderr END ====
[2025-12-14 05:56:44]  *** Error codes and diagnostics ***
[2025-12-14 05:56:44]     "exeErrorCode": 65,
[2025-12-14 05:56:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 05:56:44]     "pilotErrorCode": 1305,
[2025-12-14 05:56:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 05:56:44]  *** Listing of results directory ***
[2025-12-14 05:56:44] total 224848
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc      5112 Dec 14 00:33 queuedata.json
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc    579449 Dec 14 00:33 pilot3.tar.gz
[2025-12-14 05:56:44] -rwx------. 1 boinc boinc     36322 Dec 14 00:33 runpilot2-wrapper.sh
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc       100 Dec 14 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 05:56:44] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 05:50 run_atlas
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc       105 Dec 14 05:50 job.xml
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc      6446 Dec 14 05:50 init_data.xml
[2025-12-14 05:56:44] -rw-r--r--. 2 boinc boinc 226098491 Dec 14 05:50 EVNT.47898761._000381.pool.root.1
[2025-12-14 05:56:44] drwxrwx--x. 2 boinc boinc      4096 Dec 14 05:50 shared
[2025-12-14 05:56:44] -rw-r--r--. 2 boinc boinc    592391 Dec 14 05:50 input.tar.gz
[2025-12-14 05:56:44] -rw-r--r--. 2 boinc boinc     15847 Dec 14 05:50 start_atlas.sh
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc         0 Dec 14 05:50 boinc_lockfile
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc      2505 Dec 14 05:50 pandaJob.out
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc    991736 Dec 14 05:51 agis_schedconf.cvmfs.json
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc   1516240 Dec 14 05:51 agis_ddmendpoints.agis.ALL.json
[2025-12-14 05:56:44] drwx------. 5 boinc boinc      4096 Dec 14 05:51 pilot3
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc       524 Dec 14 05:53 boinc_task_state.xml
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc       949 Dec 14 05:53 memory_monitor_summary.json
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc     21391 Dec 14 05:53 log.47898763._009522.job.log.tgz.1
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc      8380 Dec 14 05:56 heartbeat.json
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc      8192 Dec 14 05:56 boinc_mmap_file
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc        23 Dec 14 05:56 wrapper_checkpoint.txt
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc        95 Dec 14 05:56 pilot_heartbeat.json
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc       892 Dec 14 05:56 pilotlog.txt
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc     94858 Dec 14 05:56 log.47898763._009522.job.log.1
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc       188 Dec 14 05:56 output.list
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc       620 Dec 14 05:56 runtime_log
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc    133120 Dec 14 05:56 result.tar.gz
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc       644 Dec 14 05:56 VEcKDmGjwo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmivQKDmb529mn.diag
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc      8634 Dec 14 05:56 runtime_log.err
[2025-12-14 05:56:44] -rw-r--r--. 1 boinc boinc     21808 Dec 14 05:56 stderr.txt
[2025-12-14 05:56:44] No HITS result produced
[2025-12-14 05:56:44]  *** Contents of shared directory: ***
[2025-12-14 05:56:44] total 221532
[2025-12-14 05:56:44] -rw-r--r--. 2 boinc boinc 226098491 Dec 14 05:50 ATLAS.root_0
[2025-12-14 05:56:44] -rw-r--r--. 2 boinc boinc    592391 Dec 14 05:50 input.tar.gz
[2025-12-14 05:56:44] -rw-r--r--. 2 boinc boinc     15847 Dec 14 05:50 start_atlas.sh
[2025-12-14 05:56:44] -rw-------. 1 boinc boinc    133120 Dec 14 05:56 result.tar.gz
05:56:45 (456172): run_atlas exited; CPU time 31.275986
05:56:45 (456172): called boinc_finish(0)

</stderr_txt>
]]>

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