Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:07 (23708): wrapper (7.7.26015): starting
08:39:07 (23708): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 08:39:07] Arguments: --nthreads 12
[2025-12-14 08:39:07] Threads: 12
[2025-12-14 08:39:07] Checking for CVMFS
[2025-12-14 08:39:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 08:39:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 08:39:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 08:39:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 08:39:07] 2.11.2.0 2925 313673 97620 153997 3 59 17211742 20275201 1 130560 1 139060000 99.967 18207485 15188 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 08:39:07] CVMFS is ok
[2025-12-14 08:39:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 08:39:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 08:39:07] Further information can be found at the LHC@home message board.
[2025-12-14 08:39:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 08:39:07] Checking for apptainer binary...
[2025-12-14 08:39:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 08:39:07] Running /usr/bin/apptainer --version
[2025-12-14 08:39:07] apptainer version 1.3.2-1.el7
[2025-12-14 08:39:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 08:39:09] c-205-9.aglt2.org
[2025-12-14 08:39:09] apptainer works
[2025-12-14 08:39:09] Set ATHENA_PROC_NUMBER=12
[2025-12-14 08:39:09] Set ATHENA_CORE_NUMBER=12
[2025-12-14 08:39:09] Starting ATLAS job with PandaID=6929364742
[2025-12-14 08:39:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 10:24:39]  *** The last 200 lines of the pilot log: ***
[2025-12-14 10:24:39] 2025-12-14 15:23:39,802 | INFO     | monitor loop #467: job 0:6929364742 is in state 'finished'
[2025-12-14 10:24:39] 2025-12-14 15:23:39,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,559 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 10:24:39] 2025-12-14 15:23:40,563 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-14 10:24:39] 2025-12-14 15:23:40,566 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929364742/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,567 | INFO     | extracted standard info from prmon json
[2025-12-14 10:24:39] 2025-12-14 15:23:40,567 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 10:24:39] 2025-12-14 15:23:40,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 10:24:39] 2025-12-14 15:23:40,568 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 10:24:39] 2025-12-14 15:23:40,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 10:24:39] 2025-12-14 15:23:40,570 | INFO     | fitting pss+swap vs Time
[2025-12-14 10:24:39] 2025-12-14 15:23:40,570 | INFO     | sum of square deviations: 329031285.5
[2025-12-14 10:24:39] 2025-12-14 15:23:40,571 | INFO     | sum of deviations: 5023421034.500002
[2025-12-14 10:24:39] 2025-12-14 15:23:40,571 | INFO     | mean x: 1765722673.5
[2025-12-14 10:24:39] 2025-12-14 15:23:40,571 | INFO     | mean y: 2699650.5196078434
[2025-12-14 10:24:39] 2025-12-14 15:23:40,571 | INFO     | intersect: -26955127188.574326
[2025-12-14 10:24:39] 2025-12-14 15:23:40,571 | INFO     | chi2: 1.6147294367536886
[2025-12-14 10:24:39] 2025-12-14 15:23:40,572 | INFO     | sum of square deviations: 282974608.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,572 | INFO     | sum of deviations: 5031891464.000001
[2025-12-14 10:24:39] 2025-12-14 15:23:40,572 | INFO     | mean x: 1765722521.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,572 | INFO     | mean y: 2699678.680412371
[2025-12-14 10:24:39] 2025-12-14 15:23:40,572 | INFO     | intersect: -31395608968.194584
[2025-12-14 10:24:39] 2025-12-14 15:23:40,573 | INFO     | chi2: 1.618013704556855
[2025-12-14 10:24:39] 2025-12-14 15:23:40,573 | INFO     | current chi2=1.618013704556855 (change=-0.20339431042820316 %)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,573 | INFO     | right removable region: 96
[2025-12-14 10:24:39] 2025-12-14 15:23:40,573 | INFO     | sum of square deviations: 282974608.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,573 | INFO     | sum of deviations: -11682265550.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,574 | INFO     | mean x: 1765722826.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,574 | INFO     | mean y: 2753838.175257732
[2025-12-14 10:24:39] 2025-12-14 15:23:40,574 | INFO     | intersect: 72898492034.68668
[2025-12-14 10:24:39] 2025-12-14 15:23:40,574 | INFO     | chi2: 0.13980146696506918
[2025-12-14 10:24:39] 2025-12-14 15:23:40,574 | INFO     | current chi2=0.13980146696506918 (change=91.34211194872802 %)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,574 | INFO     | sum of square deviations: 241429643.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,575 | INFO     | sum of deviations: -12692210768.999996
[2025-12-14 10:24:39] 2025-12-14 15:23:40,575 | INFO     | mean x: 1765722978.5
[2025-12-14 10:24:39] 2025-12-14 15:23:40,575 | INFO     | mean y: 2757237.934782609
[2025-12-14 10:24:39] 2025-12-14 15:23:40,575 | INFO     | intersect: 92828675067.70372
[2025-12-14 10:24:39] 2025-12-14 15:23:40,575 | INFO     | chi2: 0.08571692049914695
[2025-12-14 10:24:39] 2025-12-14 15:23:40,575 | INFO     | current chi2=0.08571692049914695 (change=38.68668021876752 %)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,576 | INFO     | sum of square deviations: 204163828.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,576 | INFO     | sum of deviations: -10357977875.999998
[2025-12-14 10:24:39] 2025-12-14 15:23:40,576 | INFO     | mean x: 1765723131.0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,576 | INFO     | mean y: 2747653.3908045976
[2025-12-14 10:24:39] 2025-12-14 15:23:40,576 | INFO     | intersect: 89584341539.05916
[2025-12-14 10:24:39] 2025-12-14 15:23:40,577 | INFO     | chi2: 0.08493410262600064
[2025-12-14 10:24:39] 2025-12-14 15:23:40,577 | INFO     | current chi2=0.08493410262600064 (change=0.9132594458454687 %)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,577 | INFO     | left removable region: 30
[2025-12-14 10:24:39] 2025-12-14 15:23:40,577 | INFO     | sum of square deviations: 89127252.5
[2025-12-14 10:24:39] 2025-12-14 15:23:40,577 | INFO     | sum of deviations: -1965721035.000002
[2025-12-14 10:24:39] 2025-12-14 15:23:40,577 | INFO     | mean x: 1765723405.5
[2025-12-14 10:24:39] 2025-12-14 15:23:40,578 | INFO     | mean y: 2704290.303030303
[2025-12-14 10:24:39] 2025-12-14 15:23:40,578 | INFO     | intersect: 38946119944.04135
[2025-12-14 10:24:39] 2025-12-14 15:23:40,578 | INFO     | chi2: 0.045476693115238984
[2025-12-14 10:24:39] 2025-12-14 15:23:40,578 | INFO     | current memory leak: -22.06 B/s (using 66 data points, chi2=0.05)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,578 | INFO     | could have reported an average CPU frequency of 2142 MHz (7 samples)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | ..............................
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . Timing measurements:
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . get job = 0 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . initial setup = 2 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . payload setup = 7 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . stage-in = 0 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . payload execution = 6218 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . stage-out = 0 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,579 | INFO     | . log creation = 0 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,580 | INFO     | ..............................
[2025-12-14 10:24:39] 2025-12-14 15:23:40,659 | INFO     | 
[2025-12-14 10:24:39] 2025-12-14 15:23:40,659 | INFO     | job summary report
[2025-12-14 10:24:39] 2025-12-14 15:23:40,659 | INFO     | --------------------------------------------------
[2025-12-14 10:24:39] 2025-12-14 15:23:40,659 | INFO     | PanDA job id: 6929364742
[2025-12-14 10:24:39] 2025-12-14 15:23:40,660 | INFO     | task id: 47898763
[2025-12-14 10:24:39] 2025-12-14 15:23:40,660 | INFO     | errors: (none)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 10:24:39] 2025-12-14 15:23:40,660 | INFO     | pilot state: finished 
[2025-12-14 10:24:39] 2025-12-14 15:23:40,660 | INFO     | transexitcode: 0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,660 | INFO     | exeerrorcode: 0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,661 | INFO     | exeerrordiag: 
[2025-12-14 10:24:39] 2025-12-14 15:23:40,661 | INFO     | exitcode: 0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,661 | INFO     | exitmsg: OK
[2025-12-14 10:24:39] 2025-12-14 15:23:40,661 | INFO     | cpuconsumptiontime: 68143 s
[2025-12-14 10:24:39] 2025-12-14 15:23:40,661 | INFO     | nevents: 400
[2025-12-14 10:24:39] 2025-12-14 15:23:40,661 | INFO     | neventsw: 0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,662 | INFO     | pid: 1308
[2025-12-14 10:24:39] 2025-12-14 15:23:40,662 | INFO     | pgrp: 1308
[2025-12-14 10:24:39] 2025-12-14 15:23:40,662 | INFO     | corecount: 12
[2025-12-14 10:24:39] 2025-12-14 15:23:40,662 | INFO     | event service: False
[2025-12-14 10:24:39] 2025-12-14 15:23:40,662 | INFO     | sizes: {0: 2283953, 5: 2284215, 11: 2284271, 6229: 2311202, 6230: 2320200, 6232: 2320256, 6240: 2320578}
[2025-12-14 10:24:39] 2025-12-14 15:23:40,662 | INFO     | --------------------------------------------------
[2025-12-14 10:24:39] 2025-12-14 15:23:40,663 | INFO     | 
[2025-12-14 10:24:39] 2025-12-14 15:23:40,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 10:24:39] 2025-12-14 15:23:40,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 10:24:39] 2025-12-14 15:23:40,728 | INFO     | job 6929364742 has completed (purged errors)
[2025-12-14 10:24:39] 2025-12-14 15:23:40,728 | INFO     | overall cleanup function is called
[2025-12-14 10:24:39] 2025-12-14 15:23:41,736 | INFO     | --- collectZombieJob: --- 10, [1308]
[2025-12-14 10:24:39] 2025-12-14 15:23:41,736 | INFO     | zombie collector waiting for pid 1308
[2025-12-14 10:24:39] 2025-12-14 15:23:41,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 10:24:39] 2025-12-14 15:23:41,736 | INFO     | collected zombie processes
[2025-12-14 10:24:39] 2025-12-14 15:23:41,736 | INFO     | will attempt to kill all subprocesses of pid=1308
[2025-12-14 10:24:39] 2025-12-14 15:23:41,827 | INFO     | process IDs to be killed: [1308] (in reverse order)
[2025-12-14 10:24:39] 2025-12-14 15:23:41,877 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 10:24:39] 2025-12-14 15:23:41,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 10:24:39] 2025-12-14 15:23:41,880 | INFO     | did not find any defunct processes belonging to 1308
[2025-12-14 10:24:39] 2025-12-14 15:23:41,882 | INFO     | did not find any defunct processes belonging to 1308
[2025-12-14 10:24:39] 2025-12-14 15:23:41,883 | INFO     | ready for new job
[2025-12-14 10:24:39] 2025-12-14 15:23:41,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 10:24:39] 2025-12-14 15:23:41,884 | INFO     | ***************************************
[2025-12-14 10:24:39] 2025-12-14 15:23:41,884 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 10:24:39] 2025-12-14 15:23:41,884 | INFO     | ***************************************
[2025-12-14 10:24:39] 2025-12-14 15:23:41,884 | INFO     | 
[2025-12-14 10:24:39] 2025-12-14 15:23:41,885 | INFO     | architecture information:
[2025-12-14 10:24:39] 2025-12-14 15:23:41,885 | INFO     | executing command: cat /etc/os-release
[2025-12-14 10:24:39] 2025-12-14 15:23:41,901 | INFO     | cat /etc/os-release:
[2025-12-14 10:24:39] NAME="CentOS Linux"
[2025-12-14 10:24:39] VERSION="7 (Core)"
[2025-12-14 10:24:39] ID="centos"
[2025-12-14 10:24:39] ID_LIKE="rhel fedora"
[2025-12-14 10:24:39] VERSION_ID="7"
[2025-12-14 10:24:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 10:24:39] ANSI_COLOR="0;31"
[2025-12-14 10:24:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 10:24:39] HOME_URL="https://www.centos.org/"
[2025-12-14 10:24:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 10:24:39] 
[2025-12-14 10:24:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 10:24:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 10:24:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 10:24:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 10:24:39] 
[2025-12-14 10:24:39] 2025-12-14 15:23:41,902 | INFO     | ***************************************
[2025-12-14 10:24:39] 2025-12-14 15:23:42,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 10:24:39] 2025-12-14 15:23:42,422 | INFO     | sufficient remaining disk space (29316087808 B)
[2025-12-14 10:24:39] 2025-12-14 15:23:42,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 10:24:39] 2025-12-14 15:23:42,423 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 10:24:39] 2025-12-14 15:23:42,423 | INFO     | update_server=False
[2025-12-14 10:24:39] 2025-12-14 15:23:42,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 10:24:39] 2025-12-14 15:23:42,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:24:39] 2025-12-14 15:23:42,801 | INFO     | all data control threads have been joined
[2025-12-14 10:24:39] 2025-12-14 15:23:43,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:24:39] 2025-12-14 15:23:43,311 | INFO     | aborting loop
[2025-12-14 10:24:39] 2025-12-14 15:23:43,429 | INFO     | [job] retrieve thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:43,429 | INFO     | [job] queue monitor thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:43,478 | INFO     | [payload] validate_post thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:43,591 | INFO     | all payload control threads have been joined
[2025-12-14 10:24:39] 2025-12-14 15:23:43,619 | INFO     | [data] copytool_in thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:43,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 10:24:39] 2025-12-14 15:23:43,684 | INFO     | [payload] failed_post thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:43,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 10:24:39] 2025-12-14 15:23:43,805 | INFO     | [data] control thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:43,959 | INFO     | [job] validate thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:44,049 | INFO     | all job control threads have been joined
[2025-12-14 10:24:39] 2025-12-14 15:23:44,130 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:44,316 | INFO     | [job] job monitor thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:44,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:44,511 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:44,520 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:44,596 | INFO     | [payload] control thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:45,054 | INFO     | [job] control thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:45,708 | INFO     | [data] copytool_out thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:23:47,670 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 10:24:39] 2025-12-14 15:24:12,087 | INFO     | PID=27390 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 10:24:39] 2025-12-14 15:24:12,087 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 10:24:39] 2025-12-14 15:24:12,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 10:24:39] 2025-12-14 15:24:12,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 10:24:39] 2025-12-14 15:24:21,817 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-12-14 10:24:39] 2025-12-14 15:24:33,723 | INFO     | [monitor] cgroup control has ended
[2025-12-14 10:24:39] 2025-12-14 15:24:33,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170843817792)>', '<ExcThread(monitor, started 140170368096000)>']
[2025-12-14 10:24:39] 2025-12-14 15:24:34,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 10:24:39] 2025-12-14 15:24:34,194 | INFO     | [monitor] control thread has ended
[2025-12-14 10:24:39] 2025-12-14 15:24:38,865 | INFO     | all workflow threads have been joined
[2025-12-14 10:24:39] 2025-12-14 15:24:38,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 10:24:39] 2025-12-14 15:24:38,877 | INFO     | traces error code: 0
[2025-12-14 10:24:39] 2025-12-14 15:24:38,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 10:24:39] 2025-12-14 15:24:38,959 [wrapper] ==== pilot stdout END ====
[2025-12-14 10:24:39] 2025-12-14 15:24:38,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 10:24:39] 2025-12-14 15:24:38,968 [wrapper] pilotpid: 27390
[2025-12-14 10:24:39] 2025-12-14 15:24:38,971 [wrapper] Pilot exit status: 0
[2025-12-14 10:24:39] 2025-12-14 15:24:38,988 [wrapper] pandaids: 6929364742
[2025-12-14 10:24:39] 2025-12-14 15:24:39,036 [wrapper] cleanup supervisor_pilot 11224 27391
[2025-12-14 10:24:39] 2025-12-14 15:24:39,040 [wrapper] Test setup, not cleaning
[2025-12-14 10:24:39] 2025-12-14 15:24:39,044 [wrapper] apfmon messages muted
[2025-12-14 10:24:39] 2025-12-14 15:24:39,049 [wrapper] ==== wrapper stdout END ====
[2025-12-14 10:24:39] 2025-12-14 15:24:39,052 [wrapper] ==== wrapper stderr END ====
[2025-12-14 10:24:39]  *** Error codes and diagnostics ***
[2025-12-14 10:24:39]     "exeErrorCode": 0,
[2025-12-14 10:24:39]     "exeErrorDiag": "",
[2025-12-14 10:24:39]     "pilotErrorCode": 0,
[2025-12-14 10:24:39]     "pilotErrorDiag": "",
[2025-12-14 10:24:39]  *** Listing of results directory ***
[2025-12-14 10:24:39] total 441976
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 20:02 pilot3.tar.gz
[2025-12-14 10:24:39] -rwx------ 1 boincer umatlas     36322 Dec 13 20:05 runpilot2-wrapper.sh
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 20:06 queuedata.json
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas       100 Dec 14 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 10:24:39] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 08:39 run_atlas
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas       105 Dec 14 08:39 job.xml
[2025-12-14 10:24:39] -rw-r--r-- 2 boincer umatlas 224455260 Dec 14 08:39 EVNT.47898761._000168.pool.root.1
[2025-12-14 10:24:39] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 08:39 start_atlas.sh
[2025-12-14 10:24:39] drwxrwx--x 2 boincer umatlas      4096 Dec 14 08:39 shared
[2025-12-14 10:24:39] -rw-r--r-- 2 boincer umatlas    592399 Dec 14 08:39 input.tar.gz
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas         0 Dec 14 08:39 boinc_lockfile
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas      2505 Dec 14 08:39 pandaJob.out
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas        57 Dec 14 08:39 setup.sh.local
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas    991736 Dec 14 08:39 agis_schedconf.cvmfs.json
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas   1516240 Dec 14 08:39 agis_ddmendpoints.agis.ALL.json
[2025-12-14 10:24:39] drwx------ 5 boincer umatlas      4096 Dec 14 08:39 pilot3
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas      5952 Dec 14 10:20 init_data.xml
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas 221630091 Dec 14 10:22 HITS.47898763._007308.pool.root.1
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas      1044 Dec 14 10:23 memory_monitor_summary.json
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas    401209 Dec 14 10:23 log.47898763._007308.job.log.tgz.1
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas       530 Dec 14 10:23 boinc_task_state.xml
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas      7848 Dec 14 10:23 heartbeat.json
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 10:24 boinc_mmap_file
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas        27 Dec 14 10:24 wrapper_checkpoint.txt
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas        95 Dec 14 10:24 pilot_heartbeat.json
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas      4746 Dec 14 10:24 pilotlog.txt
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas    888618 Dec 14 10:24 log.47898763._007308.job.log.1
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas       357 Dec 14 10:24 output.list
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas       620 Dec 14 10:24 runtime_log
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas   1310720 Dec 14 10:24 result.tar.gz
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas      9339 Dec 14 10:24 runtime_log.err
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas       659 Dec 14 10:24 nFPODmgjpo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqUQKDmFjoSWo.diag
[2025-12-14 10:24:39] -rw-r--r-- 1 boincer umatlas     21074 Dec 14 10:24 stderr.txt
[2025-12-14 10:24:39] HITS file was successfully produced:
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas 221630091 Dec 14 10:22 shared/HITS.pool.root.1
[2025-12-14 10:24:39]  *** Contents of shared directory: ***
[2025-12-14 10:24:39] total 437516
[2025-12-14 10:24:39] -rw-r--r-- 2 boincer umatlas 224455260 Dec 14 08:39 ATLAS.root_0
[2025-12-14 10:24:39] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 08:39 start_atlas.sh
[2025-12-14 10:24:39] -rw-r--r-- 2 boincer umatlas    592399 Dec 14 08:39 input.tar.gz
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas 221630091 Dec 14 10:22 HITS.pool.root.1
[2025-12-14 10:24:39] -rw------- 1 boincer umatlas   1310720 Dec 14 10:24 result.tar.gz
10:24:40 (23708): run_atlas exited; CPU time 68127.759113
10:24:40 (23708): called boinc_finish(0)

</stderr_txt>
]]>

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