Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:23:12 (341567): wrapper (7.7.26015): starting
05:23:12 (341567): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 05:23:12] Arguments: --nthreads 8
[2025-12-14 05:23:12] Threads: 8
[2025-12-14 05:23:12] Checking for CVMFS
[2025-12-14 05:23:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 05:23:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 05:23:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 05:23:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 05:23:15] 2.11.3.0 3753445 19267 358792 153997 2 409 37983326 45568000 15549 130560 0 67114583 99.658 64447230 17738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 05:23:15] CVMFS is ok
[2025-12-14 05:23:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 05:23:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 05:23:15] Further information can be found at the LHC@home message board.
[2025-12-14 05:23:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 05:23:15] Checking for apptainer binary...
[2025-12-14 05:23:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 05:23:15] Running /usr/bin/apptainer --version
[2025-12-14 05:23:15] apptainer version 1.4.1-1.el9
[2025-12-14 05:23:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 05:23:16] wns0010.triumf.lcg
[2025-12-14 05:23:16] apptainer works
[2025-12-14 05:23:16] Set ATHENA_PROC_NUMBER=8
[2025-12-14 05:23:16] Set ATHENA_CORE_NUMBER=8
[2025-12-14 05:23:16] Starting ATLAS job with PandaID=6929437223
[2025-12-14 05:23:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 05:28:54]  *** The last 200 lines of the pilot log: ***
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | WARNING  | wrong length of table data, x=[1765718718.0], y=[1071.0] (must be same and length>=4)
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | INFO     | ..............................
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . Timing measurements:
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . get job = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . initial setup = 5 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . payload setup = 17 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . stage-in = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . payload execution = 65 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . stage-out = 1 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . log creation = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | ..............................
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929437223/pilotlog.txt
[2025-12-14 05:28:54] 2025-12-14 13:28:19,031 | INFO     | time since job start (270s) is within the limit (174528.0s)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,063 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 05:28:54] - Log from pilotlog.txt -
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | INFO     | extracted standard info from prmon json
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | WARNING  | wrong length of table data, x=[1765718718.0], y=[1071.0] (must be same and length>=4)
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | INFO     | ..............................
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . Timing measurements:
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . get job = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . initial setup = 5 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . payload setup = 17 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . stage-in = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . payload execution = 65 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . stage-out = 1 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . log creation = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | ..............................
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929437223/pilotlog.txt
[2025-12-14 05:28:54] 2025-12-14 13:28:19,031 | INFO     | time since job start (270s) is within the limit (174528.0s)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,063 | WARNING  | 
[2025-12-14 05:28:54] [begin log extracts]
[2025-12-14 05:28:54] - Log from pilotlog.txt -
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | INFO     | extracted standard info from prmon json
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:28:54] 2025-12-14 13:28:18,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | WARNING  | wrong length of table data, x=[1765718718.0], y=[1071.0] (must be same and length>=4)
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 05:28:54] 2025-12-14 13:28:18,862 | INFO     | ..............................
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . Timing measurements:
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . get job = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . initial setup = 5 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . payload setup = 17 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . stage-in = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . payload execution = 65 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . stage-out = 1 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | . log creation = 0 s
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | ..............................
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 05:28:54] 2025-12-14 13:28:18,863 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929437223/pilotlog.txt
[2025-12-14 05:28:54] 2025-12-14 13:28:19,031 | INFO     | time since job start (270s) is within the limit (174528.0s)
[2025-12-14 05:28:54] [end log extracts]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,064 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,065 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 05:28:54] 2025-12-14 13:28:19,333 | INFO     | 
[2025-12-14 05:28:54] 2025-12-14 13:28:19,333 | INFO     | job summary report
[2025-12-14 05:28:54] 2025-12-14 13:28:19,333 | INFO     | --------------------------------------------------
[2025-12-14 05:28:54] 2025-12-14 13:28:19,333 | INFO     | PanDA job id: 6929437223
[2025-12-14 05:28:54] 2025-12-14 13:28:19,333 | INFO     | task id: 47898763
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 05:25:47,658 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | pilot state: failed 
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | transexitcode: 65
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | exeerrorcode: 65
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | exitcode: 65
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | cpuconsumptiontime: 19 s
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | nevents: 0
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | neventsw: 0
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | pid: 352040
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | pgrp: 352040
[2025-12-14 05:28:54] 2025-12-14 13:28:19,334 | INFO     | corecount: 8
[2025-12-14 05:28:54] 2025-12-14 13:28:19,335 | INFO     | event service: False
[2025-12-14 05:28:54] 2025-12-14 13:28:19,335 | INFO     | sizes: {0: 2283722, 1: 2283806, 2: 2284005, 13: 2284005, 19: 2284323, 24: 2284351, 86: 2307752, 87: 2307728, 88: 2312048, 91: 2312076, 228: 2312242}
[2025-12-14 05:28:54] 2025-12-14 13:28:19,335 | INFO     | --------------------------------------------------
[2025-12-14 05:28:54] 2025-12-14 13:28:19,335 | INFO     | 
[2025-12-14 05:28:54] 2025-12-14 13:28:19,335 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 05:28:54] 2025-12-14 13:28:19,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | job 6929437223 has completed (purged errors)
[2025-12-14 05:28:54] 2025-12-14 13:28:19,354 | INFO     | overall cleanup function is called
[2025-12-14 05:28:54] 2025-12-14 13:28:20,361 | INFO     | --- collectZombieJob: --- 10, [352040]
[2025-12-14 05:28:54] 2025-12-14 13:28:20,361 | INFO     | zombie collector waiting for pid 352040
[2025-12-14 05:28:54] 2025-12-14 13:28:20,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 05:28:54] 2025-12-14 13:28:20,361 | INFO     | collected zombie processes
[2025-12-14 05:28:54] 2025-12-14 13:28:20,362 | INFO     | will attempt to kill all subprocesses of pid=352040
[2025-12-14 05:28:54] 2025-12-14 13:28:22,504 | INFO     | process IDs to be killed: [352040] (in reverse order)
[2025-12-14 05:28:54] 2025-12-14 13:28:22,877 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 05:28:54] 2025-12-14 13:28:22,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 05:28:54] 2025-12-14 13:28:22,907 | INFO     | did not find any defunct processes belonging to 352040
[2025-12-14 05:28:54] 2025-12-14 13:28:22,929 | INFO     | did not find any defunct processes belonging to 352040
[2025-12-14 05:28:54] 2025-12-14 13:28:22,930 | INFO     | ready for new job
[2025-12-14 05:28:54] 2025-12-14 13:28:22,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 05:28:54] 2025-12-14 13:28:22,931 | INFO     | ***************************************
[2025-12-14 05:28:54] 2025-12-14 13:28:22,931 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 05:28:54] 2025-12-14 13:28:22,931 | INFO     | ***************************************
[2025-12-14 05:28:54] 2025-12-14 13:28:22,931 | INFO     | 
[2025-12-14 05:28:54] 2025-12-14 13:28:22,933 | INFO     | architecture information:
[2025-12-14 05:28:54] 2025-12-14 13:28:22,954 | INFO     | executing command: cat /etc/os-release
[2025-12-14 05:28:54] 2025-12-14 13:28:22,985 | INFO     | cat /etc/os-release:
[2025-12-14 05:28:54] NAME="CentOS Linux"
[2025-12-14 05:28:54] VERSION="7 (Core)"
[2025-12-14 05:28:54] ID="centos"
[2025-12-14 05:28:54] ID_LIKE="rhel fedora"
[2025-12-14 05:28:54] VERSION_ID="7"
[2025-12-14 05:28:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 05:28:54] ANSI_COLOR="0;31"
[2025-12-14 05:28:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 05:28:54] HOME_URL="https://www.centos.org/"
[2025-12-14 05:28:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 05:28:54] 
[2025-12-14 05:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 05:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 05:28:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 05:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 05:28:54] 
[2025-12-14 05:28:54] 2025-12-14 13:28:22,985 | INFO     | ***************************************
[2025-12-14 05:28:54] 2025-12-14 13:28:23,488 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 05:28:54] 2025-12-14 13:28:23,521 | INFO     | sufficient remaining disk space (1421744275456 B)
[2025-12-14 05:28:54] 2025-12-14 13:28:23,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 05:28:54] 2025-12-14 13:28:23,522 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 05:28:54] 2025-12-14 13:28:23,522 | INFO     | update_server=False
[2025-12-14 05:28:54] 2025-12-14 13:28:23,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 05:28:54] 2025-12-14 13:28:23,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 05:28:54] 2025-12-14 13:28:23,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 05:28:54] 2025-12-14 13:28:24,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:28:54] 2025-12-14 13:28:24,064 | INFO     | aborting loop
[2025-12-14 05:28:54] 2025-12-14 13:28:24,397 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:28:54] 2025-12-14 13:28:24,495 | INFO     | all data control threads have been joined
[2025-12-14 05:28:54] 2025-12-14 13:28:24,528 | INFO     | [job] retrieve thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:24,673 | INFO     | [payload] validate_post thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:24,773 | INFO     | all job control threads have been joined
[2025-12-14 05:28:54] 2025-12-14 13:28:24,792 | INFO     | all payload control threads have been joined
[2025-12-14 05:28:54] 2025-12-14 13:28:24,833 | INFO     | [payload] failed_post thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,064 | INFO     | [data] copytool_in thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,070 | INFO     | [job] job monitor thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,128 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,140 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,403 | INFO     | [job] queue monitor thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,501 | INFO     | [data] control thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,530 | INFO     | [data] copytool_out thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,740 | INFO     | [job] validate thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,741 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,779 | INFO     | [job] control thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:25,806 | INFO     | [payload] control thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:27,738 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 05:28:54] 2025-12-14 13:28:48,694 | INFO     | [monitor] cgroup control has ended
[2025-12-14 05:28:54] 2025-12-14 13:28:48,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505850373952)>', '<ExcThread(monitor, started 140505459439360)>']
[2025-12-14 05:28:54] 2025-12-14 13:28:52,479 | INFO     | PID=345311 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 05:28:54] 2025-12-14 13:28:52,479 | INFO     | .. there are 33 such processes running
[2025-12-14 05:28:54] 2025-12-14 13:28:52,480 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 05:28:54] 2025-12-14 13:28:52,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 05:28:54] 2025-12-14 13:28:52,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 05:28:54] 2025-12-14 13:28:52,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 05:28:54] 2025-12-14 13:28:52,480 | INFO     | [monitor] control thread has ended
[2025-12-14 05:28:54] 2025-12-14 13:28:53,934 | INFO     | all workflow threads have been joined
[2025-12-14 05:28:54] 2025-12-14 13:28:53,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 05:28:54] 2025-12-14 13:28:53,935 | INFO     | traces error code: 0
[2025-12-14 05:28:54] 2025-12-14 13:28:53,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 05:28:54] 2025-12-14 13:28:54,054 [wrapper] ==== pilot stdout END ====
[2025-12-14 05:28:54] 2025-12-14 13:28:54,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 05:28:54] 2025-12-14 13:28:54,058 [wrapper] pilotpid: 345311
[2025-12-14 05:28:54] 2025-12-14 13:28:54,060 [wrapper] Pilot exit status: 0
[2025-12-14 05:28:54] 2025-12-14 13:28:54,086 [wrapper] pandaids: 6929437223
[2025-12-14 05:28:54] 2025-12-14 13:28:54,127 [wrapper] cleanup supervisor_pilot  345317 345312
[2025-12-14 05:28:54] 2025-12-14 13:28:54,129 [wrapper] Test setup, not cleaning
[2025-12-14 05:28:54] 2025-12-14 13:28:54,131 [wrapper] apfmon messages muted
[2025-12-14 05:28:54] 2025-12-14 13:28:54,132 [wrapper] ==== wrapper stdout END ====
[2025-12-14 05:28:54] 2025-12-14 13:28:54,134 [wrapper] ==== wrapper stderr END ====
[2025-12-14 05:28:54]  *** Error codes and diagnostics ***
[2025-12-14 05:28:54]     "exeErrorCode": 65,
[2025-12-14 05:28:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 05:28:54]     "pilotErrorCode": 1305,
[2025-12-14 05:28:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-14 05:28:54]  *** Listing of results directory ***
[2025-12-14 05:28:54] total 221160
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc    579449 Dec 13 23:50 pilot3.tar.gz
[2025-12-14 05:28:54] -rwx------. 1 boinc boinc     36322 Dec 13 23:50 runpilot2-wrapper.sh
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc      5112 Dec 13 23:51 queuedata.json
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc       100 Dec 14 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 05:28:54] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 05:23 run_atlas
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc       105 Dec 14 05:23 job.xml
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc      6446 Dec 14 05:23 init_data.xml
[2025-12-14 05:28:54] -rw-r--r--. 2 boinc boinc 222319617 Dec 14 05:23 EVNT.47898761._000360.pool.root.1
[2025-12-14 05:28:54] -rw-r--r--. 2 boinc boinc     15847 Dec 14 05:23 start_atlas.sh
[2025-12-14 05:28:54] drwxrwx--x. 2 boinc boinc      4096 Dec 14 05:23 shared
[2025-12-14 05:28:54] -rw-r--r--. 2 boinc boinc    592393 Dec 14 05:23 input.tar.gz
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc         0 Dec 14 05:23 boinc_lockfile
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc      2504 Dec 14 05:23 pandaJob.out
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc    991736 Dec 14 05:23 agis_schedconf.cvmfs.json
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc   1516240 Dec 14 05:23 agis_ddmendpoints.agis.ALL.json
[2025-12-14 05:28:54] drwx------. 5 boinc boinc      4096 Dec 14 05:23 pilot3
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc       524 Dec 14 05:25 boinc_task_state.xml
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc       953 Dec 14 05:25 memory_monitor_summary.json
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc     21078 Dec 14 05:25 log.47898763._008980.job.log.tgz.1
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc      8385 Dec 14 05:28 heartbeat.json
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc      8192 Dec 14 05:28 boinc_mmap_file
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc        23 Dec 14 05:28 wrapper_checkpoint.txt
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc        95 Dec 14 05:28 pilot_heartbeat.json
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc      4822 Dec 14 05:28 pilotlog.txt
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc     93134 Dec 14 05:28 log.47898763._008980.job.log.1
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc       188 Dec 14 05:28 output.list
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc       620 Dec 14 05:28 runtime_log
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc    133120 Dec 14 05:28 result.tar.gz
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc      8634 Dec 14 05:28 runtime_log.err
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc       644 Dec 14 05:28 5BHKDmK3vo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm37UKDmAvXTvm.diag
[2025-12-14 05:28:54] -rw-r--r--. 1 boinc boinc     21752 Dec 14 05:28 stderr.txt
[2025-12-14 05:28:54] No HITS result produced
[2025-12-14 05:28:54]  *** Contents of shared directory: ***
[2025-12-14 05:28:54] total 217844
[2025-12-14 05:28:54] -rw-r--r--. 2 boinc boinc 222319617 Dec 14 05:23 ATLAS.root_0
[2025-12-14 05:28:54] -rw-r--r--. 2 boinc boinc     15847 Dec 14 05:23 start_atlas.sh
[2025-12-14 05:28:54] -rw-r--r--. 2 boinc boinc    592393 Dec 14 05:23 input.tar.gz
[2025-12-14 05:28:54] -rw-------. 1 boinc boinc    133120 Dec 14 05:28 result.tar.gz
05:28:56 (341567): run_atlas exited; CPU time 30.346890
05:28:56 (341567): called boinc_finish(0)

</stderr_txt>
]]>

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