Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:05:18 (17288): wrapper (7.7.26015): starting
08:05:18 (17288): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 08:05:18] Arguments: --nthreads 12
[2025-12-14 08:05:18] Threads: 12
[2025-12-14 08:05:18] Checking for CVMFS
[2025-12-14 08:05:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 08:05:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 08:05:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 08:05:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 08:05:18] 2.11.2.0 3103 103614 93680 153996 0 57 17066918 20275201 1 130560 0 45250470 99.929 5435488 33057 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 08:05:18] CVMFS is ok
[2025-12-14 08:05:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 08:05:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 08:05:18] Further information can be found at the LHC@home message board.
[2025-12-14 08:05:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 08:05:18] Checking for apptainer binary...
[2025-12-14 08:05:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 08:05:18] Running /usr/bin/apptainer --version
[2025-12-14 08:05:18] apptainer version 1.3.2-1.el7
[2025-12-14 08:05:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 08:05:19] c-115-41.aglt2.org
[2025-12-14 08:05:19] apptainer works
[2025-12-14 08:05:19] Set ATHENA_PROC_NUMBER=12
[2025-12-14 08:05:19] Set ATHENA_CORE_NUMBER=12
[2025-12-14 08:05:19] Starting ATLAS job with PandaID=6929436644
[2025-12-14 08:05:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 09:37:02]  *** The last 200 lines of the pilot log: ***
[2025-12-14 09:37:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-14 09:37:02]  replicas=None
[2025-12-14 09:37:02]  scope=mc23_13p6TeV
[2025-12-14 09:37:02]  status=None
[2025-12-14 09:37:02]  status_code=0
[2025-12-14 09:37:02]  storage_token=
[2025-12-14 09:37:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929436644/log.47898763._008439.job.log.tgz.1
[2025-12-14 09:37:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/42/log.47898763._008439.job.log.tgz.1
[2025-12-14 09:37:02]  workdir=None
[2025-12-14 09:37:02] ]
[2025-12-14 09:37:02] 2025-12-14 14:36:21,056 | INFO     | transferring file log.47898763._008439.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929436644/log.47898763._008439.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 09:37:02] 2025-12-14 14:36:21,056 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929436644/log.47898763._008439.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898763._008439.job
[2025-12-14 09:37:02] 2025-12-14 14:36:21,078 | INFO     | adding to output.list: log.47898763._008439.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/42/log.47898763._008439.job.log.tg
[2025-12-14 09:37:02] 2025-12-14 14:36:21,079 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 09:37:02] 2025-12-14 14:36:21,079 | INFO     | summary of transferred files:
[2025-12-14 09:37:02] 2025-12-14 14:36:21,079 | INFO     |  -- lfn=log.47898763._008439.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 09:37:02] 2025-12-14 14:36:21,079 | INFO     | stage-out finished correctly
[2025-12-14 09:37:02] 2025-12-14 14:36:22,481 | INFO     | time since job start (5448s) is within the limit (174528.0s)
[2025-12-14 09:37:02] 2025-12-14 14:36:22,553 | INFO     | monitor loop #407: job 0:6929436644 is in state 'finished'
[2025-12-14 09:37:02] 2025-12-14 14:36:22,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 09:37:02] 2025-12-14 14:36:24,487 | INFO     | time since job start (5450s) is within the limit (174528.0s)
[2025-12-14 09:37:02] 2025-12-14 14:36:24,520 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 09:37:02] 2025-12-14 14:36:24,594 | INFO     | job 6929436644 has state=finished
[2025-12-14 09:37:02] 2025-12-14 14:36:24,594 | INFO     | preparing for final server update for job 6929436644 in state='finished'
[2025-12-14 09:37:02] 2025-12-14 14:36:24,662 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-14 09:37:02] 2025-12-14 14:36:24,662 | INFO     | this job has now completed (state=finished)
[2025-12-14 09:37:02] 2025-12-14 14:36:24,662 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 09:37:02] 2025-12-14 14:36:24,663 | INFO     | log transfer has been attempted: DONE
[2025-12-14 09:37:02] 2025-12-14 14:36:24,663 | INFO     | job 6929436644 has finished - writing final server update
[2025-12-14 09:37:02] 2025-12-14 14:36:24,663 | INFO     | total number of processed events: 400 (read)
[2025-12-14 09:37:02] 2025-12-14 14:36:24,664 | INFO     | executing command: lscpu
[2025-12-14 09:37:02] 2025-12-14 14:36:24,690 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 09:37:02] 2025-12-14 14:36:25,062 | INFO     | monitor loop #408: job 0:6929436644 is in state 'finished'
[2025-12-14 09:37:02] 2025-12-14 14:36:25,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 09:37:02] 2025-12-14 14:36:26,492 | INFO     | time since job start (5452s) is within the limit (174528.0s)
[2025-12-14 09:37:02] 2025-12-14 14:36:27,565 | INFO     | monitor loop #409: job 0:6929436644 is in state 'finished'
[2025-12-14 09:37:02] 2025-12-14 14:36:27,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 09:37:02] 2025-12-14 14:36:28,498 | INFO     | time since job start (5454s) is within the limit (174528.0s)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,410 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 09:37:02] 2025-12-14 14:36:29,414 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-12-14 09:37:02] 2025-12-14 14:36:29,417 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929436644/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,418 | INFO     | extracted standard info from prmon json
[2025-12-14 09:37:02] 2025-12-14 14:36:29,418 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 09:37:02] 2025-12-14 14:36:29,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 09:37:02] 2025-12-14 14:36:29,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 09:37:02] 2025-12-14 14:36:29,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 09:37:02] 2025-12-14 14:36:29,421 | INFO     | fitting pss+swap vs Time
[2025-12-14 09:37:02] 2025-12-14 14:36:29,421 | INFO     | sum of square deviations: 170944600.5
[2025-12-14 09:37:02] 2025-12-14 14:36:29,421 | INFO     | sum of deviations: 404927607.4999999
[2025-12-14 09:37:02] 2025-12-14 14:36:29,422 | INFO     | mean x: 1765720337.5
[2025-12-14 09:37:02] 2025-12-14 14:36:29,422 | INFO     | mean y: 2704019.8414634145
[2025-12-14 09:37:02] 2025-12-14 14:36:29,422 | INFO     | intersect: -4179872731.2619867
[2025-12-14 09:37:02] 2025-12-14 14:36:29,422 | INFO     | chi2: 0.013284880910075817
[2025-12-14 09:37:02] 2025-12-14 14:36:29,422 | INFO     | current memory leak: 2.37 B/s (using 82 data points, chi2=0.01)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | could have reported an average CPU frequency of 2172 MHz (6 samples)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | ..............................
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | . Timing measurements:
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | . get job = 0 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | . initial setup = 2 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | . payload setup = 7 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,423 | INFO     | . stage-in = 0 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,424 | INFO     | . payload execution = 5418 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,424 | INFO     | . stage-out = 0 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,424 | INFO     | . log creation = 0 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,424 | INFO     | ..............................
[2025-12-14 09:37:02] 2025-12-14 14:36:29,499 | INFO     | 
[2025-12-14 09:37:02] 2025-12-14 14:36:29,499 | INFO     | job summary report
[2025-12-14 09:37:02] 2025-12-14 14:36:29,506 | INFO     | --------------------------------------------------
[2025-12-14 09:37:02] 2025-12-14 14:36:29,506 | INFO     | PanDA job id: 6929436644
[2025-12-14 09:37:02] 2025-12-14 14:36:29,506 | INFO     | task id: 47898763
[2025-12-14 09:37:02] 2025-12-14 14:36:29,506 | INFO     | errors: (none)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | pilot state: finished 
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | transexitcode: 0
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | exeerrorcode: 0
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | exeerrordiag: 
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | exitcode: 0
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | exitmsg: OK
[2025-12-14 09:37:02] 2025-12-14 14:36:29,507 | INFO     | cpuconsumptiontime: 60146 s
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | nevents: 400
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | neventsw: 0
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | pid: 27477
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | pgrp: 27477
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | corecount: 12
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | event service: False
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | sizes: {0: 2283952, 5: 2284214, 11: 2284270, 5428: 2310799, 5430: 2319797, 5434: 2319853, 5439: 2320175}
[2025-12-14 09:37:02] 2025-12-14 14:36:29,508 | INFO     | --------------------------------------------------
[2025-12-14 09:37:02] 2025-12-14 14:36:29,509 | INFO     | 
[2025-12-14 09:37:02] 2025-12-14 14:36:29,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 09:37:02] 2025-12-14 14:36:29,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 09:37:02] 2025-12-14 14:36:29,536 | INFO     | job 6929436644 has completed (purged errors)
[2025-12-14 09:37:02] 2025-12-14 14:36:29,536 | INFO     | overall cleanup function is called
[2025-12-14 09:37:02] 2025-12-14 14:36:30,545 | INFO     | --- collectZombieJob: --- 10, [27477]
[2025-12-14 09:37:02] 2025-12-14 14:36:30,545 | INFO     | zombie collector waiting for pid 27477
[2025-12-14 09:37:02] 2025-12-14 14:36:30,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 09:37:02] 2025-12-14 14:36:30,545 | INFO     | collected zombie processes
[2025-12-14 09:37:02] 2025-12-14 14:36:30,545 | INFO     | will attempt to kill all subprocesses of pid=27477
[2025-12-14 09:37:02] 2025-12-14 14:36:30,633 | INFO     | process IDs to be killed: [27477] (in reverse order)
[2025-12-14 09:37:02] 2025-12-14 14:36:30,683 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 09:37:02] 2025-12-14 14:36:30,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 09:37:02] 2025-12-14 14:36:30,688 | INFO     | did not find any defunct processes belonging to 27477
[2025-12-14 09:37:02] 2025-12-14 14:36:30,690 | INFO     | did not find any defunct processes belonging to 27477
[2025-12-14 09:37:02] 2025-12-14 14:36:30,691 | INFO     | ready for new job
[2025-12-14 09:37:02] 2025-12-14 14:36:30,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 09:37:02] 2025-12-14 14:36:30,692 | INFO     | ***************************************
[2025-12-14 09:37:02] 2025-12-14 14:36:30,692 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 09:37:02] 2025-12-14 14:36:30,692 | INFO     | ***************************************
[2025-12-14 09:37:02] 2025-12-14 14:36:30,692 | INFO     | 
[2025-12-14 09:37:02] 2025-12-14 14:36:30,692 | INFO     | architecture information:
[2025-12-14 09:37:02] 2025-12-14 14:36:30,693 | INFO     | executing command: cat /etc/os-release
[2025-12-14 09:37:02] 2025-12-14 14:36:30,707 | INFO     | cat /etc/os-release:
[2025-12-14 09:37:02] NAME="CentOS Linux"
[2025-12-14 09:37:02] VERSION="7 (Core)"
[2025-12-14 09:37:02] ID="centos"
[2025-12-14 09:37:02] ID_LIKE="rhel fedora"
[2025-12-14 09:37:02] VERSION_ID="7"
[2025-12-14 09:37:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 09:37:02] ANSI_COLOR="0;31"
[2025-12-14 09:37:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 09:37:02] HOME_URL="https://www.centos.org/"
[2025-12-14 09:37:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 09:37:02] 
[2025-12-14 09:37:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 09:37:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 09:37:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 09:37:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 09:37:02] 
[2025-12-14 09:37:02] 2025-12-14 14:36:30,707 | INFO     | ***************************************
[2025-12-14 09:37:02] 2025-12-14 14:36:31,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 09:37:02] 2025-12-14 14:36:31,227 | INFO     | sufficient remaining disk space (18534629376 B)
[2025-12-14 09:37:02] 2025-12-14 14:36:31,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 09:37:02] 2025-12-14 14:36:31,227 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 09:37:02] 2025-12-14 14:36:31,228 | INFO     | update_server=False
[2025-12-14 09:37:02] 2025-12-14 14:36:31,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 09:37:02] 2025-12-14 14:36:31,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 09:37:02] 2025-12-14 14:36:31,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 09:37:02] 2025-12-14 14:36:31,229 | INFO     | aborting loop
[2025-12-14 09:37:02] 2025-12-14 14:36:31,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 09:37:02] 2025-12-14 14:36:31,497 | INFO     | all payload control threads have been joined
[2025-12-14 09:37:02] 2025-12-14 14:36:31,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 09:37:02] 2025-12-14 14:36:31,700 | INFO     | all data control threads have been joined
[2025-12-14 09:37:02] 2025-12-14 14:36:31,809 | INFO     | all job control threads have been joined
[2025-12-14 09:37:02] 2025-12-14 14:36:32,233 | INFO     | [job] retrieve thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,235 | INFO     | [job] job monitor thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,235 | INFO     | [job] queue monitor thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,304 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,306 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,377 | INFO     | [data] copytool_in thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,502 | INFO     | [payload] control thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,705 | INFO     | [data] control thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,792 | INFO     | [payload] validate_post thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:32,814 | INFO     | [job] control thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:33,102 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:33,537 | INFO     | [job] validate thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:33,673 | INFO     | [data] copytool_out thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:33,771 | INFO     | [payload] failed_post thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:35,229 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:42,217 | INFO     | job.realtimelogging is not enabled
[2025-12-14 09:37:02] 2025-12-14 14:36:42,601 | INFO     | [monitor] cgroup control has ended
[2025-12-14 09:37:02] 2025-12-14 14:36:43,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 09:37:02] 2025-12-14 14:36:45,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081703216960)>', '<ExcThread(monitor, started 140081255917312)>']
[2025-12-14 09:37:02] 2025-12-14 14:36:50,061 | INFO     | all workflow threads have been joined
[2025-12-14 09:37:02] 2025-12-14 14:36:50,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 09:37:02] 2025-12-14 14:36:50,064 | INFO     | traces error code: 0
[2025-12-14 09:37:02] 2025-12-14 14:36:50,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 09:37:02] 2025-12-14 14:37:01,705 | INFO     | PID=21060 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 09:37:02] 2025-12-14 14:37:01,706 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 09:37:02] 2025-12-14 14:37:01,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 09:37:02] 2025-12-14 14:37:01,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 09:37:02] 2025-12-14 14:37:01,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 09:37:02] 2025-12-14 14:37:01,706 | INFO     | [monitor] control thread has ended
[2025-12-14 09:37:02] 2025-12-14 14:37:01,804 [wrapper] ==== pilot stdout END ====
[2025-12-14 09:37:02] 2025-12-14 14:37:01,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 09:37:02] 2025-12-14 14:37:01,811 [wrapper] pilotpid: 21060
[2025-12-14 09:37:02] 2025-12-14 14:37:01,815 [wrapper] Pilot exit status: 0
[2025-12-14 09:37:02] 2025-12-14 14:37:01,829 [wrapper] pandaids: 6929436644
[2025-12-14 09:37:02] 2025-12-14 14:37:01,866 [wrapper] cleanup supervisor_pilot  5356 21061
[2025-12-14 09:37:02] 2025-12-14 14:37:01,870 [wrapper] Test setup, not cleaning
[2025-12-14 09:37:02] 2025-12-14 14:37:01,875 [wrapper] apfmon messages muted
[2025-12-14 09:37:02] 2025-12-14 14:37:01,879 [wrapper] ==== wrapper stdout END ====
[2025-12-14 09:37:02] 2025-12-14 14:37:01,882 [wrapper] ==== wrapper stderr END ====
[2025-12-14 09:37:02]  *** Error codes and diagnostics ***
[2025-12-14 09:37:02]     "exeErrorCode": 0,
[2025-12-14 09:37:02]     "exeErrorDiag": "",
[2025-12-14 09:37:02]     "pilotErrorCode": 0,
[2025-12-14 09:37:02]     "pilotErrorDiag": "",
[2025-12-14 09:37:02]  *** Listing of results directory ***
[2025-12-14 09:37:02] total 443844
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas      5112 Dec 14 02:50 queuedata.json
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas    579449 Dec 14 02:50 pilot3.tar.gz
[2025-12-14 09:37:02] -rwx------ 1 boincer umatlas     36322 Dec 14 02:50 runpilot2-wrapper.sh
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas       100 Dec 14 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 09:37:02] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 08:05 run_atlas
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas       105 Dec 14 08:05 job.xml
[2025-12-14 09:37:02] -rw-r--r-- 2 boincer umatlas 222962523 Dec 14 08:05 EVNT.47898761._000338.pool.root.1
[2025-12-14 09:37:02] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 08:05 start_atlas.sh
[2025-12-14 09:37:02] drwxrwx--x 2 boincer umatlas      4096 Dec 14 08:05 shared
[2025-12-14 09:37:02] -rw-r--r-- 2 boincer umatlas    592394 Dec 14 08:05 input.tar.gz
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas         0 Dec 14 08:05 boinc_lockfile
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas      2504 Dec 14 08:05 pandaJob.out
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas        57 Dec 14 08:05 setup.sh.local
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas    991728 Dec 14 08:05 agis_schedconf.cvmfs.json
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas   1516240 Dec 14 08:05 agis_ddmendpoints.agis.ALL.json
[2025-12-14 09:37:02] drwx------ 5 boincer umatlas      4096 Dec 14 08:05 pilot3
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 09:30 init_data.xml
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas 225253688 Dec 14 09:35 HITS.47898763._008439.pool.root.1
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas       529 Dec 14 09:36 boinc_task_state.xml
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas      1046 Dec 14 09:36 memory_monitor_summary.json
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas    397573 Dec 14 09:36 log.47898763._008439.job.log.tgz.1
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas      7838 Dec 14 09:36 heartbeat.json
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas        27 Dec 14 09:36 wrapper_checkpoint.txt
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 09:36 boinc_mmap_file
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas        95 Dec 14 09:37 pilot_heartbeat.json
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas       745 Dec 14 09:37 pilotlog.txt
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas    781081 Dec 14 09:37 log.47898763._008439.job.log.1
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas       357 Dec 14 09:37 output.list
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas       620 Dec 14 09:37 runtime_log
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas   1198080 Dec 14 09:37 result.tar.gz
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 09:37 runtime_log.err
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas       659 Dec 14 09:37 4AmKDm92vo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmP6UKDm93SODo.diag
[2025-12-14 09:37:02] -rw-r--r-- 1 boincer umatlas     21908 Dec 14 09:37 stderr.txt
[2025-12-14 09:37:02] HITS file was successfully produced:
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas 225253688 Dec 14 09:35 shared/HITS.pool.root.1
[2025-12-14 09:37:02]  *** Contents of shared directory: ***
[2025-12-14 09:37:02] total 439492
[2025-12-14 09:37:02] -rw-r--r-- 2 boincer umatlas 222962523 Dec 14 08:05 ATLAS.root_0
[2025-12-14 09:37:02] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 08:05 start_atlas.sh
[2025-12-14 09:37:02] -rw-r--r-- 2 boincer umatlas    592394 Dec 14 08:05 input.tar.gz
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas 225253688 Dec 14 09:35 HITS.pool.root.1
[2025-12-14 09:37:02] -rw------- 1 boincer umatlas   1198080 Dec 14 09:37 result.tar.gz
09:37:03 (17288): run_atlas exited; CPU time 60096.435842
09:37:03 (17288): called boinc_finish(0)

</stderr_txt>
]]>

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