Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:37:30 (150095): wrapper (7.7.26015): starting
11:37:30 (150095): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 11:37:30] Arguments: --nthreads 8
[2025-12-14 11:37:30] Threads: 8
[2025-12-14 11:37:30] Checking for CVMFS
[2025-12-14 11:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 11:37:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 11:37:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 11:37:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 11:37:30] 2.13.2.0 9432 60010 250108 154002 2 399 35020720 39288832 7238 16776704 0 47125024 99.670 44011948 38832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 11:37:30] CVMFS is ok
[2025-12-14 11:37:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 11:37:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 11:37:30] Further information can be found at the LHC@home message board.
[2025-12-14 11:37:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 11:37:30] Checking for apptainer binary...
[2025-12-14 11:37:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 11:37:30] Running /usr/bin/apptainer --version
[2025-12-14 11:37:30] apptainer version 1.4.4-1.el9
[2025-12-14 11:37:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 11:37:31] c-211-5.aglt2.org
[2025-12-14 11:37:31] apptainer works
[2025-12-14 11:37:31] Set ATHENA_PROC_NUMBER=8
[2025-12-14 11:37:31] Set ATHENA_CORE_NUMBER=8
[2025-12-14 11:37:31] Starting ATLAS job with PandaID=6929435863
[2025-12-14 11:37:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 17:02:45]  *** The last 200 lines of the pilot log: ***
[2025-12-14 17:02:45] 2025-12-14 22:02:08,588 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 17:02:45] 2025-12-14 22:02:08,629 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1637000000005
[2025-12-14 17:02:45] 2025-12-14 22:02:08,685 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929435863/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,686 | INFO     | extracted standard info from prmon json
[2025-12-14 17:02:45] 2025-12-14 22:02:08,686 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 17:02:45] 2025-12-14 22:02:08,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 17:02:45] 2025-12-14 22:02:08,699 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 17:02:45] 2025-12-14 22:02:08,699 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 17:02:45] 2025-12-14 22:02:08,739 | INFO     | fitting pss+swap vs Time
[2025-12-14 17:02:45] 2025-12-14 22:02:08,740 | INFO     | sum of square deviations: 9971676211.38684
[2025-12-14 17:02:45] 2025-12-14 22:02:08,763 | INFO     | sum of deviations: -551674126.2735748
[2025-12-14 17:02:45] 2025-12-14 22:02:08,763 | INFO     | mean x: 1765739958.518868
[2025-12-14 17:02:45] 2025-12-14 22:02:08,763 | INFO     | mean y: 2519546.462264151
[2025-12-14 17:02:45] 2025-12-14 22:02:08,763 | INFO     | intersect: 100207540.75653106
[2025-12-14 17:02:45] 2025-12-14 22:02:08,764 | INFO     | chi2: 2.1490009823657186
[2025-12-14 17:02:45] 2025-12-14 22:02:08,764 | INFO     | sum of square deviations: 9508741868.741177
[2025-12-14 17:02:45] 2025-12-14 22:02:08,791 | INFO     | sum of deviations: 19294465258.801888
[2025-12-14 17:02:45] 2025-12-14 22:02:08,792 | INFO     | mean x: 1765739806.028754
[2025-12-14 17:02:45] 2025-12-14 22:02:08,792 | INFO     | mean y: 2526000.4664536742
[2025-12-14 17:02:45] 2025-12-14 22:02:08,792 | INFO     | intersect: -3580388102.555215
[2025-12-14 17:02:45] 2025-12-14 22:02:08,792 | INFO     | chi2: 1.4659701689583333
[2025-12-14 17:02:45] 2025-12-14 22:02:08,792 | INFO     | current chi2=1.4659701689583333 (change=31.783643609854177 %)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,793 | INFO     | sum of square deviations: 9060346480.60713
[2025-12-14 17:02:45] 2025-12-14 22:02:08,819 | INFO     | sum of deviations: 18747097286.714306
[2025-12-14 17:02:45] 2025-12-14 22:02:08,820 | INFO     | mean x: 1765739653.5357144
[2025-12-14 17:02:45] 2025-12-14 22:02:08,820 | INFO     | mean y: 2525814.298701299
[2025-12-14 17:02:45] 2025-12-14 22:02:08,820 | INFO     | intersect: -3651031269.7152715
[2025-12-14 17:02:45] 2025-12-14 22:02:08,821 | INFO     | chi2: 1.4662027228177157
[2025-12-14 17:02:45] 2025-12-14 22:02:08,821 | INFO     | current chi2=1.4662027228177157 (change=-0.015863478282618252 %)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,821 | INFO     | right removable region: 307
[2025-12-14 17:02:45] 2025-12-14 22:02:08,821 | INFO     | sum of square deviations: 9508485653.182056
[2025-12-14 17:02:45] 2025-12-14 22:02:08,848 | INFO     | sum of deviations: -47054598000.98402
[2025-12-14 17:02:45] 2025-12-14 22:02:08,849 | INFO     | mean x: 1765740111.0511181
[2025-12-14 17:02:45] 2025-12-14 22:02:08,849 | INFO     | mean y: 2534762.8115015975
[2025-12-14 17:02:45] 2025-12-14 22:02:08,849 | INFO     | intersect: 8740644502.916971
[2025-12-14 17:02:45] 2025-12-14 22:02:08,874 | INFO     | chi2: 0.8621740402051327
[2025-12-14 17:02:45] 2025-12-14 22:02:08,874 | INFO     | current chi2=0.8621740402051327 (change=59.88023982864764 %)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,874 | INFO     | sum of square deviations: 9059853506.805174
[2025-12-14 17:02:45] 2025-12-14 22:02:08,877 | INFO     | sum of deviations: -54793649022.87009
[2025-12-14 17:02:45] 2025-12-14 22:02:08,877 | INFO     | mean x: 1765740263.5844157
[2025-12-14 17:02:45] 2025-12-14 22:02:08,901 | INFO     | mean y: 2537370.3603896103
[2025-12-14 17:02:45] 2025-12-14 22:02:08,902 | INFO     | intersect: 10681667247.650486
[2025-12-14 17:02:45] 2025-12-14 22:02:08,902 | INFO     | chi2: 0.8096166880229783
[2025-12-14 17:02:45] 2025-12-14 22:02:08,902 | INFO     | current chi2=0.8096166880229783 (change=6.095909843173857 %)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,903 | INFO     | left removable region: 20
[2025-12-14 17:02:45] 2025-12-14 22:02:08,903 | INFO     | sum of square deviations: 7329952695.30312
[2025-12-14 17:02:45] 2025-12-14 22:02:08,905 | INFO     | sum of deviations: -23005994961.540043
[2025-12-14 17:02:45] 2025-12-14 22:02:08,925 | INFO     | mean x: 1765740233.163763
[2025-12-14 17:02:45] 2025-12-14 22:02:08,925 | INFO     | mean y: 2540087.3519163765
[2025-12-14 17:02:45] 2025-12-14 22:02:08,925 | INFO     | intersect: 5544541870.471771
[2025-12-14 17:02:45] 2025-12-14 22:02:08,930 | INFO     | chi2: 0.09869523051409014
[2025-12-14 17:02:45] 2025-12-14 22:02:08,931 | INFO     | current memory leak: -3.14 B/s (using 287 data points, chi2=0.10)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | ..............................
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | . Timing measurements:
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | . get job = 0 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | . initial setup = 2 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | . payload setup = 5 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,937 | INFO     | . stage-in = 0 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,938 | INFO     | . payload execution = 19396 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,938 | INFO     | . stage-out = 7 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,938 | INFO     | . log creation = 0 s
[2025-12-14 17:02:45] 2025-12-14 22:02:08,938 | INFO     | ..............................
[2025-12-14 17:02:45] 2025-12-14 22:02:09,982 | INFO     | 
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | job summary report
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | --------------------------------------------------
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | PanDA job id: 6929435863
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | task id: 47898763
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | errors: (none)
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | pilot state: finished 
[2025-12-14 17:02:45] 2025-12-14 22:02:09,983 | INFO     | transexitcode: 0
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | exeerrorcode: 0
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | exeerrordiag: 
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | exitcode: 0
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | exitmsg: OK
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | cpuconsumptiontime: 68411 s
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | nevents: 400
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | neventsw: 0
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | pid: 160147
[2025-12-14 17:02:45] 2025-12-14 22:02:09,984 | INFO     | pgrp: 160147
[2025-12-14 17:02:45] 2025-12-14 22:02:09,997 | INFO     | corecount: 8
[2025-12-14 17:02:45] 2025-12-14 22:02:09,997 | INFO     | event service: False
[2025-12-14 17:02:45] 2025-12-14 22:02:09,997 | INFO     | sizes: {0: 2283781, 1: 2283980, 5: 2284242, 11: 2284298, 19406: 2317656, 19415: 2326838, 19451: 2326976}
[2025-12-14 17:02:45] 2025-12-14 22:02:09,997 | INFO     | --------------------------------------------------
[2025-12-14 17:02:45] 2025-12-14 22:02:09,997 | INFO     | 
[2025-12-14 17:02:45] 2025-12-14 22:02:09,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 17:02:45] 2025-12-14 22:02:10,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | job 6929435863 has completed (purged errors)
[2025-12-14 17:02:45] 2025-12-14 22:02:10,206 | INFO     | overall cleanup function is called
[2025-12-14 17:02:45] 2025-12-14 22:02:11,256 | INFO     | --- collectZombieJob: --- 10, [160147]
[2025-12-14 17:02:45] 2025-12-14 22:02:11,257 | INFO     | zombie collector waiting for pid 160147
[2025-12-14 17:02:45] 2025-12-14 22:02:11,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 17:02:45] 2025-12-14 22:02:11,258 | INFO     | collected zombie processes
[2025-12-14 17:02:45] 2025-12-14 22:02:11,258 | INFO     | will attempt to kill all subprocesses of pid=160147
[2025-12-14 17:02:45] 2025-12-14 22:02:11,278 | INFO     | PID=153764 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 17:02:45] 2025-12-14 22:02:11,278 | INFO     | .. there are 7 such processes running
[2025-12-14 17:02:45] 2025-12-14 22:02:11,958 | INFO     | process IDs to be killed: [160147] (in reverse order)
[2025-12-14 17:02:45] 2025-12-14 22:02:12,483 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 17:02:45] 2025-12-14 22:02:12,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 17:02:45] 2025-12-14 22:02:12,499 | INFO     | did not find any defunct processes belonging to 160147
[2025-12-14 17:02:45] 2025-12-14 22:02:12,515 | INFO     | did not find any defunct processes belonging to 160147
[2025-12-14 17:02:45] 2025-12-14 22:02:12,515 | INFO     | ready for new job
[2025-12-14 17:02:45] 2025-12-14 22:02:12,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 17:02:45] 2025-12-14 22:02:12,523 | INFO     | ***************************************
[2025-12-14 17:02:45] 2025-12-14 22:02:12,523 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 17:02:45] 2025-12-14 22:02:12,523 | INFO     | ***************************************
[2025-12-14 17:02:45] 2025-12-14 22:02:12,523 | INFO     | 
[2025-12-14 17:02:45] 2025-12-14 22:02:12,525 | INFO     | architecture information:
[2025-12-14 17:02:45] 2025-12-14 22:02:12,525 | INFO     | executing command: cat /etc/os-release
[2025-12-14 17:02:45] 2025-12-14 22:02:12,579 | INFO     | cat /etc/os-release:
[2025-12-14 17:02:45] NAME="CentOS Linux"
[2025-12-14 17:02:45] VERSION="7 (Core)"
[2025-12-14 17:02:45] ID="centos"
[2025-12-14 17:02:45] ID_LIKE="rhel fedora"
[2025-12-14 17:02:45] VERSION_ID="7"
[2025-12-14 17:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 17:02:45] ANSI_COLOR="0;31"
[2025-12-14 17:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 17:02:45] HOME_URL="https://www.centos.org/"
[2025-12-14 17:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 17:02:45] 
[2025-12-14 17:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 17:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 17:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 17:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 17:02:45] 
[2025-12-14 17:02:45] 2025-12-14 22:02:12,579 | INFO     | ***************************************
[2025-12-14 17:02:45] 2025-12-14 22:02:13,096 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 17:02:45] 2025-12-14 22:02:13,183 | INFO     | sufficient remaining disk space (53094645760 B)
[2025-12-14 17:02:45] 2025-12-14 22:02:13,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 17:02:45] 2025-12-14 22:02:13,183 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 17:02:45] 2025-12-14 22:02:13,184 | INFO     | update_server=False
[2025-12-14 17:02:45] 2025-12-14 22:02:13,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 17:02:45] 2025-12-14 22:02:13,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 17:02:45] 2025-12-14 22:02:13,184 | INFO     | aborting loop
[2025-12-14 17:02:45] 2025-12-14 22:02:13,510 | INFO     | all data control threads have been joined
[2025-12-14 17:02:45] 2025-12-14 22:02:13,675 | INFO     | all job control threads have been joined
[2025-12-14 17:02:45] 2025-12-14 22:02:13,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 17:02:45] 2025-12-14 22:02:14,191 | INFO     | [job] retrieve thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,191 | INFO     | [job] job monitor thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,417 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,418 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,419 | INFO     | [job] validate thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,516 | INFO     | [data] control thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,599 | INFO     | all payload control threads have been joined
[2025-12-14 17:02:45] 2025-12-14 22:02:14,683 | INFO     | [job] control thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:14,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 17:02:45] 2025-12-14 22:02:15,281 | INFO     | [payload] failed_post thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:15,281 | INFO     | [payload] validate_post thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:15,463 | INFO     | [data] copytool_in thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:15,469 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:15,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 17:02:45] 2025-12-14 22:02:15,606 | INFO     | [payload] control thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:15,884 | INFO     | [data] copytool_out thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:15,942 | INFO     | [job] queue monitor thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:17,309 | INFO     | [monitor] cgroup control has ended
[2025-12-14 17:02:45] 2025-12-14 22:02:19,669 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 17:02:45] 2025-12-14 22:02:19,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050703906624)>', '<ExcThread(monitor, started 140050075473664)>']
[2025-12-14 17:02:45] 2025-12-14 22:02:24,794 | INFO     | all workflow threads have been joined
[2025-12-14 17:02:45] 2025-12-14 22:02:24,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 17:02:45] 2025-12-14 22:02:24,795 | INFO     | traces error code: 0
[2025-12-14 17:02:45] 2025-12-14 22:02:24,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 17:02:45] 2025-12-14 22:02:43,821 | INFO     | PID=153764 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 17:02:45] 2025-12-14 22:02:43,822 | INFO     | .. there are 7 such processes running
[2025-12-14 17:02:45] 2025-12-14 22:02:43,822 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 17:02:45] 2025-12-14 22:02:43,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 17:02:45] 2025-12-14 22:02:43,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 17:02:45] 2025-12-14 22:02:43,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 17:02:45] 2025-12-14 22:02:43,822 | INFO     | [monitor] control thread has ended
[2025-12-14 17:02:45] 2025-12-14 22:02:44,293 [wrapper] ==== pilot stdout END ====
[2025-12-14 17:02:45] 2025-12-14 22:02:44,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 17:02:45] 2025-12-14 22:02:44,357 [wrapper] pilotpid: 153764
[2025-12-14 17:02:45] 2025-12-14 22:02:44,359 [wrapper] Pilot exit status: 0
[2025-12-14 17:02:45] 2025-12-14 22:02:44,468 [wrapper] pandaids: 6929435863
[2025-12-14 17:02:45] 2025-12-14 22:02:44,668 [wrapper] cleanup supervisor_pilot  557770 153765
[2025-12-14 17:02:45] 2025-12-14 22:02:44,671 [wrapper] Test setup, not cleaning
[2025-12-14 17:02:45] 2025-12-14 22:02:44,673 [wrapper] apfmon messages muted
[2025-12-14 17:02:45] 2025-12-14 22:02:44,675 [wrapper] ==== wrapper stdout END ====
[2025-12-14 17:02:45] 2025-12-14 22:02:44,678 [wrapper] ==== wrapper stderr END ====
[2025-12-14 17:02:45]  *** Error codes and diagnostics ***
[2025-12-14 17:02:45]     "exeErrorCode": 0,
[2025-12-14 17:02:45]     "exeErrorDiag": "",
[2025-12-14 17:02:45]     "pilotErrorCode": 0,
[2025-12-14 17:02:45]     "pilotErrorDiag": "",
[2025-12-14 17:02:45]  *** Listing of results directory ***
[2025-12-14 17:02:45] total 445300
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 02:50 queuedata.json
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 02:50 pilot3.tar.gz
[2025-12-14 17:02:45] -rwx------. 1 boincer umatlas     36322 Dec 14 02:50 runpilot2-wrapper.sh
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas       100 Dec 14 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 17:02:45] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 11:37 run_atlas
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas       105 Dec 14 11:37 job.xml
[2025-12-14 17:02:45] -rw-r--r--. 2 boincer umatlas 223871607 Dec 14 11:37 EVNT.47898761._000331.pool.root.1
[2025-12-14 17:02:45] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 11:37 start_atlas.sh
[2025-12-14 17:02:45] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 11:37 shared
[2025-12-14 17:02:45] -rw-r--r--. 2 boincer umatlas    592398 Dec 14 11:37 input.tar.gz
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas         0 Dec 14 11:37 boinc_lockfile
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas      2504 Dec 14 11:37 pandaJob.out
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas        57 Dec 14 11:37 setup.sh.local
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas    991024 Dec 14 11:37 agis_schedconf.cvmfs.json
[2025-12-14 17:02:45] drwx------. 5 boincer umatlas      4096 Dec 14 11:37 pilot3
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas      6658 Dec 14 16:58 init_data.xml
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas 221998700 Dec 14 16:59 HITS.47898763._008275.pool.root.1
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas       531 Dec 14 16:59 boinc_task_state.xml
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas      1042 Dec 14 17:01 memory_monitor_summary.json
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas   1516240 Dec 14 17:01 agis_ddmendpoints.agis.ALL.json
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas    542822 Dec 14 17:01 log.47898763._008275.job.log.tgz.1
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas        95 Dec 14 17:02 pilot_heartbeat.json
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas      7816 Dec 14 17:02 heartbeat.json
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas        28 Dec 14 17:02 wrapper_checkpoint.txt
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas       821 Dec 14 17:02 pilotlog.txt
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas   2559862 Dec 14 17:02 log.47898763._008275.job.log.1
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 17:02 boinc_mmap_file
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas       357 Dec 14 17:02 output.list
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas       620 Dec 14 17:02 runtime_log
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas   3123200 Dec 14 17:02 result.tar.gz
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas      9338 Dec 14 17:02 runtime_log.err
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas       656 Dec 14 17:02 OaZMDm82vo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF5UKDmrJbThn.diag
[2025-12-14 17:02:45] -rw-r--r--. 1 boincer umatlas     21172 Dec 14 17:02 stderr.txt
[2025-12-14 17:02:45] HITS file was successfully produced:
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas 221998700 Dec 14 16:59 shared/HITS.pool.root.1
[2025-12-14 17:02:45]  *** Contents of shared directory: ***
[2025-12-14 17:02:45] total 439076
[2025-12-14 17:02:45] -rw-r--r--. 2 boincer umatlas 223871607 Dec 14 11:37 ATLAS.root_0
[2025-12-14 17:02:45] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 11:37 start_atlas.sh
[2025-12-14 17:02:45] -rw-r--r--. 2 boincer umatlas    592398 Dec 14 11:37 input.tar.gz
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas 221998700 Dec 14 16:59 HITS.pool.root.1
[2025-12-14 17:02:45] -rw-------. 1 boincer umatlas   3123200 Dec 14 17:02 result.tar.gz
17:03:07 (150095): run_atlas exited; CPU time 68811.646693
17:03:07 (150095): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN