Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:52:59 (4141427): wrapper (7.7.26015): starting
21:52:59 (4141427): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 21:52:59] Arguments: --nthreads 4
[2025-12-15 21:52:59] Threads: 4
[2025-12-15 21:52:59] Checking for CVMFS
[2025-12-15 21:52:59] No cvmfs_config command found, will try listing directly
[2025-12-15 21:52:59] CVMFS is ok
[2025-12-15 21:52:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 21:52:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 21:52:59] Further information can be found at the LHC@home message board.
[2025-12-15 21:52:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 21:52:59] Checking for apptainer binary...
[2025-12-15 21:52:59] which: no apptainer in ((null))
[2025-12-15 21:52:59] apptainer is not installed, using version from CVMFS
[2025-12-15 21:52:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 21:52:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-12-15 21:52:59] apptainer works
[2025-12-15 21:52:59] Set ATHENA_PROC_NUMBER=4
[2025-12-15 21:52:59] Set ATHENA_CORE_NUMBER=4
[2025-12-15 21:52:59] Starting ATLAS job with PandaID=6929365962
[2025-12-15 21:52:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:16:31]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:16:31] 2025-12-16 02:09:53,592 | INFO     | monitor loop #1379: job 0:6929365962 is in state 'finished'
[2025-12-16 03:16:31] 2025-12-16 02:09:53,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:16:31] 2025-12-16 02:09:54,167 | INFO     | time since job start (19005s) is within the limit (174528.0s)
[2025-12-16 03:16:31] 2025-12-16 02:09:55,600 | INFO     | PID=4145140 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 03:16:31] 2025-12-16 02:09:55,601 | INFO     | .. there are 3 such processes running
[2025-12-16 03:16:31] 2025-12-16 02:09:56,095 | INFO     | monitor loop #1380: job 0:6929365962 is in state 'finished'
[2025-12-16 03:16:31] 2025-12-16 02:09:56,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:16:31] 2025-12-16 02:09:56,601 | INFO     | time since job start (19007s) is within the limit (174528.0s)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,502 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 03:16:31] 2025-12-16 02:09:57,510 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2549.8665250000004
[2025-12-16 03:16:31] 2025-12-16 02:09:57,518 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6929365962/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,518 | INFO     | extracted standard info from prmon json
[2025-12-16 03:16:31] 2025-12-16 02:09:57,519 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 03:16:31] 2025-12-16 02:09:57,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 03:16:31] 2025-12-16 02:09:57,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 03:16:31] 2025-12-16 02:09:57,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 03:16:31] 2025-12-16 02:09:57,525 | INFO     | fitting pss+swap vs Time
[2025-12-16 03:16:31] 2025-12-16 02:09:57,526 | INFO     | sum of square deviations: 9327281860.0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,529 | INFO     | sum of deviations: -4921870277.999996
[2025-12-16 03:16:31] 2025-12-16 02:09:57,529 | INFO     | mean x: 1765841470.0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,529 | INFO     | mean y: 2360492.4758842443
[2025-12-16 03:16:31] 2025-12-16 02:09:57,530 | INFO     | intersect: 934169220.6033326
[2025-12-16 03:16:31] 2025-12-16 02:09:57,530 | INFO     | chi2: 1.5055374514790003
[2025-12-16 03:16:31] 2025-12-16 02:09:57,531 | INFO     | sum of square deviations: 8884603792.5
[2025-12-16 03:16:31] 2025-12-16 02:09:57,534 | INFO     | sum of deviations: -4753375834.000008
[2025-12-16 03:16:31] 2025-12-16 02:09:57,534 | INFO     | mean x: 1765841317.5
[2025-12-16 03:16:31] 2025-12-16 02:09:57,534 | INFO     | mean y: 2360550.522875817
[2025-12-16 03:16:31] 2025-12-16 02:09:57,534 | INFO     | intersect: 947108075.715709
[2025-12-16 03:16:31] 2025-12-16 02:09:57,535 | INFO     | chi2: 1.50547929348901
[2025-12-16 03:16:31] 2025-12-16 02:09:57,535 | INFO     | current chi2=1.50547929348901 (change=0.0038629387753311745 %)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,535 | INFO     | right removable region: 305
[2025-12-16 03:16:31] 2025-12-16 02:09:57,535 | INFO     | sum of square deviations: 8884603792.5
[2025-12-16 03:16:31] 2025-12-16 02:09:57,538 | INFO     | sum of deviations: -37350246716.49999
[2025-12-16 03:16:31] 2025-12-16 02:09:57,538 | INFO     | mean x: 1765841622.5
[2025-12-16 03:16:31] 2025-12-16 02:09:57,539 | INFO     | mean y: 2371536.3496732027
[2025-12-16 03:16:31] 2025-12-16 02:09:57,539 | INFO     | intersect: 7425844974.55923
[2025-12-16 03:16:31] 2025-12-16 02:09:57,539 | INFO     | chi2: 0.274972378627898
[2025-12-16 03:16:31] 2025-12-16 02:09:57,539 | INFO     | current chi2=0.274972378627898 (change=81.73593235041929 %)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,540 | INFO     | sum of square deviations: 8456158550.0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,543 | INFO     | sum of deviations: -25698783635.000008
[2025-12-16 03:16:31] 2025-12-16 02:09:57,543 | INFO     | mean x: 1765841775.0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,543 | INFO     | mean y: 2367379.3820598004
[2025-12-16 03:16:31] 2025-12-16 02:09:57,543 | INFO     | intersect: 5368868662.564524
[2025-12-16 03:16:31] 2025-12-16 02:09:57,544 | INFO     | chi2: 0.23184413055757777
[2025-12-16 03:16:31] 2025-12-16 02:09:57,544 | INFO     | current chi2=0.23184413055757777 (change=15.684574678201704 %)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,544 | INFO     | left removable region: 20
[2025-12-16 03:16:31] 2025-12-16 02:09:57,545 | INFO     | sum of square deviations: 7178069470.0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,547 | INFO     | sum of deviations: 7745000907.999998
[2025-12-16 03:16:31] 2025-12-16 02:09:57,548 | INFO     | mean x: 1765841897.0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,548 | INFO     | mean y: 2354768.9228070173
[2025-12-16 03:16:31] 2025-12-16 02:09:57,548 | INFO     | intersect: -1902955168.9105809
[2025-12-16 03:16:31] 2025-12-16 02:09:57,548 | INFO     | chi2: 0.002397618522475469
[2025-12-16 03:16:31] 2025-12-16 02:09:57,549 | INFO     | current memory leak: 1.08 B/s (using 285 data points, chi2=0.00)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,549 | INFO     | could have reported an average CPU frequency of 2536 MHz (14 samples)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,550 | INFO     | ..............................
[2025-12-16 03:16:31] 2025-12-16 02:09:57,550 | INFO     | . Timing measurements:
[2025-12-16 03:16:31] 2025-12-16 02:09:57,550 | INFO     | . get job = 0 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,550 | INFO     | . initial setup = 1 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,550 | INFO     | . payload setup = 5 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,550 | INFO     | . stage-in = 0 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,551 | INFO     | . payload execution = 18974 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,551 | INFO     | . stage-out = 1 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,551 | INFO     | . log creation = 0 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,551 | INFO     | ..............................
[2025-12-16 03:16:31] 2025-12-16 02:09:57,657 | INFO     | 
[2025-12-16 03:16:31] 2025-12-16 02:09:57,657 | INFO     | job summary report
[2025-12-16 03:16:31] 2025-12-16 02:09:57,657 | INFO     | --------------------------------------------------
[2025-12-16 03:16:31] 2025-12-16 02:09:57,657 | INFO     | PanDA job id: 6929365962
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | task id: 47898763
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | errors: (none)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | pilot state: finished 
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | transexitcode: 0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | exeerrorcode: 0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | exeerrordiag: 
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | exitcode: 0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,658 | INFO     | exitmsg: OK
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | cpuconsumptiontime: 73439 s
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | nevents: 400
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | neventsw: 0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | pid: 4151894
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | pgrp: 4151894
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | corecount: 4
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | event service: False
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | sizes: {0: 2283792, 1: 2283991, 5: 2284253, 11: 2284309, 18984: 2317005, 18986: 2326209, 18993: 2326347}
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | --------------------------------------------------
[2025-12-16 03:16:31] 2025-12-16 02:09:57,659 | INFO     | 
[2025-12-16 03:16:31] 2025-12-16 02:09:57,660 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-12-16 03:16:31] 2025-12-16 02:09:57,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 03:16:31] 2025-12-16 02:09:57,682 | INFO     | job 6929365962 has completed (purged errors)
[2025-12-16 03:16:31] 2025-12-16 02:09:57,682 | INFO     | overall cleanup function is called
[2025-12-16 03:16:31] 2025-12-16 02:09:58,686 | INFO     | --- collectZombieJob: --- 10, [4151894]
[2025-12-16 03:16:31] 2025-12-16 02:09:58,686 | INFO     | zombie collector waiting for pid 4151894
[2025-12-16 03:16:31] 2025-12-16 02:09:58,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 03:16:31] 2025-12-16 02:09:58,686 | INFO     | collected zombie processes
[2025-12-16 03:16:31] 2025-12-16 02:09:58,687 | INFO     | will attempt to kill all subprocesses of pid=4151894
[2025-12-16 03:16:31] 2025-12-16 02:09:59,043 | INFO     | process IDs to be killed: [4151894] (in reverse order)
[2025-12-16 03:16:31] 2025-12-16 02:09:59,129 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 03:16:31] 2025-12-16 02:09:59,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 03:16:31] 2025-12-16 02:09:59,139 | INFO     | did not find any defunct processes belonging to 4151894
[2025-12-16 03:16:31] 2025-12-16 02:09:59,147 | INFO     | did not find any defunct processes belonging to 4151894
[2025-12-16 03:16:31] 2025-12-16 02:09:59,147 | INFO     | ready for new job
[2025-12-16 03:16:31] 2025-12-16 02:09:59,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 03:16:31] 2025-12-16 02:09:59,150 | INFO     | ***************************************
[2025-12-16 03:16:31] 2025-12-16 02:09:59,150 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 03:16:31] 2025-12-16 02:09:59,150 | INFO     | ***************************************
[2025-12-16 03:16:31] 2025-12-16 02:09:59,150 | INFO     | 
[2025-12-16 03:16:31] 2025-12-16 02:09:59,153 | INFO     | architecture information:
[2025-12-16 03:16:31] 2025-12-16 02:09:59,153 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:16:31] 2025-12-16 02:09:59,168 | INFO     | cat /etc/os-release:
[2025-12-16 03:16:31] NAME="CentOS Linux"
[2025-12-16 03:16:31] VERSION="7 (Core)"
[2025-12-16 03:16:31] ID="centos"
[2025-12-16 03:16:31] ID_LIKE="rhel fedora"
[2025-12-16 03:16:31] VERSION_ID="7"
[2025-12-16 03:16:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:16:31] ANSI_COLOR="0;31"
[2025-12-16 03:16:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:16:31] HOME_URL="https://www.centos.org/"
[2025-12-16 03:16:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:16:31] 
[2025-12-16 03:16:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:16:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:16:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:16:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:16:31] 
[2025-12-16 03:16:31] 2025-12-16 02:09:59,168 | INFO     | ***************************************
[2025-12-16 03:16:31] 2025-12-16 02:09:59,672 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-12-16 03:16:31] 2025-12-16 02:09:59,685 | INFO     | sufficient remaining disk space (1677805486080 B)
[2025-12-16 03:16:31] 2025-12-16 02:09:59,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:16:31] 2025-12-16 02:09:59,686 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:16:31] 2025-12-16 02:09:59,686 | INFO     | update_server=False
[2025-12-16 03:16:31] 2025-12-16 02:09:59,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:16:31] 2025-12-16 02:09:59,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:16:31] 2025-12-16 02:09:59,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:16:31] 2025-12-16 02:09:59,687 | INFO     | aborting loop
[2025-12-16 03:16:31] 2025-12-16 02:10:00,692 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:00,693 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:00,718 | INFO     | all data control threads have been joined
[2025-12-16 03:16:31] 2025-12-16 02:10:01,115 | INFO     | all payload control threads have been joined
[2025-12-16 03:16:31] 2025-12-16 02:10:01,148 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,172 | INFO     | all job control threads have been joined
[2025-12-16 03:16:31] 2025-12-16 02:10:01,258 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,560 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,693 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,723 | INFO     | [data] control thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:16:31] 2025-12-16 02:10:01,793 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,799 | INFO     | [job] validate thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:01,875 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:02,059 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:02,120 | INFO     | [payload] control thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:02,177 | INFO     | [job] control thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:02,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:16:31] 2025-12-16 02:10:03,670 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:05,736 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:09,928 | INFO     | job.realtimelogging is not enabled
[2025-12-16 03:16:31] 2025-12-16 02:10:10,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:16:31] 2025-12-16 02:10:30,128 | INFO     | PID=4145140 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 03:16:31] 2025-12-16 02:10:30,129 | INFO     | .. there are 3 such processes running
[2025-12-16 03:16:31] 2025-12-16 02:10:30,129 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:16:31] 2025-12-16 02:10:30,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:16:31] 2025-12-16 02:10:30,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:16:31] 2025-12-16 02:10:40,429 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:16:31] 2025-12-16 02:10:40,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23061434582848)>', '<ExcThread(monitor, started 23061191415552)>']
[2025-12-16 03:16:31] 2025-12-16 02:10:41,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:16:31] 2025-12-16 02:10:41,185 | INFO     | [monitor] control thread has ended
[2025-12-16 03:16:31] 2025-12-16 02:10:45,495 | INFO     | all workflow threads have been joined
[2025-12-16 03:16:31] 2025-12-16 02:10:45,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:16:31] 2025-12-16 02:10:45,495 | INFO     | traces error code: 0
[2025-12-16 03:16:31] 2025-12-16 02:10:45,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:16:31] 2025-12-16 02:10:45,615 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:16:31] 2025-12-16 02:10:45,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:16:31] 2025-12-16 02:10:45,620 [wrapper] pilotpid: 4145140
[2025-12-16 03:16:31] 2025-12-16 02:10:45,622 [wrapper] Pilot exit status: 0
[2025-12-16 03:16:31] 2025-12-16 02:10:45,631 [wrapper] pandaids: 6929365962
[2025-12-16 03:16:31] 2025-12-16 02:10:45,687 [wrapper] cleanup supervisor_pilot  179456 4145141
[2025-12-16 03:16:31] 2025-12-16 02:10:45,690 [wrapper] Test setup, not cleaning
[2025-12-16 03:16:31] 2025-12-16 02:10:45,692 [wrapper] apfmon messages muted
[2025-12-16 03:16:31] 2025-12-16 02:10:45,694 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:16:31] 2025-12-16 02:10:45,697 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:16:31]  *** Error codes and diagnostics ***
[2025-12-16 03:16:31]     "exeErrorCode": 0,
[2025-12-16 03:16:31]     "exeErrorDiag": "",
[2025-12-16 03:16:31]     "pilotErrorCode": 0,
[2025-12-16 03:16:31]     "pilotErrorDiag": "",
[2025-12-16 03:16:31]  *** Listing of results directory ***
[2025-12-16 03:16:31] total 448460
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc    597923 Dec  8 08:17 pilot3.tar.gz
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc      5112 Dec 14 02:03 queuedata.json
[2025-12-16 03:16:31] -rwx------ 1 boinc boinc     36322 Dec 14 02:03 runpilot2-wrapper.sh
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc       100 Dec 15 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:16:31] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 21:52 run_atlas
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc       105 Dec 15 21:52 job.xml
[2025-12-16 03:16:31] -rw-r--r-- 2 boinc boinc 225600048 Dec 15 21:52 EVNT.47898761._000184.pool.root.1
[2025-12-16 03:16:31] -rw-r--r-- 2 boinc boinc    610534 Dec 15 21:52 input.tar.gz
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc      6425 Dec 15 21:52 init_data.xml
[2025-12-16 03:16:31] -rw-r--r-- 2 boinc boinc     15847 Dec 15 21:52 start_atlas.sh
[2025-12-16 03:16:31] drwxrwx--x 2 boinc boinc      4096 Dec 15 21:52 shared
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc         0 Dec 15 21:52 boinc_lockfile
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc      2504 Dec 15 21:52 pandaJob.out
[2025-12-16 03:16:31] -rw------- 1 boinc boinc    994539 Dec 15 21:53 agis_schedconf.cvmfs.json
[2025-12-16 03:16:31] drwx------ 7 boinc boinc      4096 Dec 15 21:53 pilot3
[2025-12-16 03:16:31] -rw------- 1 boinc boinc 223367767 Dec 16 03:09 HITS.47898763._007712.pool.root.1
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc       528 Dec 16 03:09 boinc_task_state.xml
[2025-12-16 03:16:31] -rw------- 1 boinc boinc        95 Dec 16 03:09 pilot_heartbeat.json
[2025-12-16 03:16:31] -rw------- 1 boinc boinc      1038 Dec 16 03:09 memory_monitor_summary.json
[2025-12-16 03:16:31] -rw------- 1 boinc boinc   1516240 Dec 16 03:09 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:16:31] -rw------- 1 boinc boinc    468612 Dec 16 03:09 log.47898763._007712.job.log.tgz.1
[2025-12-16 03:16:31] -rw------- 1 boinc boinc      7830 Dec 16 03:09 heartbeat.json
[2025-12-16 03:16:31] -rw------- 1 boinc boinc      4906 Dec 16 03:10 pilotlog.txt
[2025-12-16 03:16:31] -rw------- 1 boinc boinc   2680805 Dec 16 03:10 log.47898763._007712.job.log.1
[2025-12-16 03:16:31] -rw------- 1 boinc boinc       357 Dec 16 03:10 output.list
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc       620 Dec 16 03:10 runtime_log
[2025-12-16 03:16:31] -rw------- 1 boinc boinc   3164160 Dec 16 03:10 result.tar.gz
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc      9206 Dec 16 03:10 runtime_log.err
[2025-12-16 03:16:31] -rw------- 1 boinc boinc       665 Dec 16 03:10 CR9KDmchpo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaPQKDm1Uyc6m.diag
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc        27 Dec 16 03:16 wrapper_checkpoint.txt
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc      8192 Dec 16 03:16 boinc_mmap_file
[2025-12-16 03:16:31] -rw-r--r-- 1 boinc boinc     21161 Dec 16 03:16 stderr.txt
[2025-12-16 03:16:31] HITS file was successfully produced:
[2025-12-16 03:16:31] -rw------- 1 boinc boinc 223367767 Dec 16 03:09 shared/HITS.pool.root.1
[2025-12-16 03:16:31]  *** Contents of shared directory: ***
[2025-12-16 03:16:31] total 442168
[2025-12-16 03:16:31] -rw-r--r-- 2 boinc boinc 225600048 Dec 15 21:52 ATLAS.root_0
[2025-12-16 03:16:31] -rw-r--r-- 2 boinc boinc    610534 Dec 15 21:52 input.tar.gz
[2025-12-16 03:16:31] -rw-r--r-- 2 boinc boinc     15847 Dec 15 21:52 start_atlas.sh
[2025-12-16 03:16:31] -rw------- 1 boinc boinc 223367767 Dec 16 03:09 HITS.pool.root.1
[2025-12-16 03:16:31] -rw------- 1 boinc boinc   3164160 Dec 16 03:10 result.tar.gz
03:16:33 (4141427): run_atlas exited; CPU time 74153.149566
03:16:33 (4141427): called boinc_finish(0)

</stderr_txt>
]]>

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