Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:18:09 (23848): wrapper (7.7.26015): starting
07:18:09 (23848): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 07:18:09] Arguments: --nthreads 8
[2025-12-14 07:18:09] Threads: 8
[2025-12-14 07:18:09] Checking for CVMFS
[2025-12-14 07:18:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 07:18:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 07:18:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 07:18:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 07:18:10] 2.11.2.0 31887 32297 103816 153994 0 59 11210891 20275201 1 130560 0 8971359 99.878 2156607 36135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 07:18:10] CVMFS is ok
[2025-12-14 07:18:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 07:18:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 07:18:10] Further information can be found at the LHC@home message board.
[2025-12-14 07:18:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 07:18:10] Checking for apptainer binary...
[2025-12-14 07:18:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 07:18:10] Running /usr/bin/apptainer --version
[2025-12-14 07:18:10] apptainer version 1.3.2-1.el7
[2025-12-14 07:18:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 07:18:11] c-204-12.aglt2.org
[2025-12-14 07:18:11] apptainer works
[2025-12-14 07:18:12] Set ATHENA_PROC_NUMBER=8
[2025-12-14 07:18:12] Set ATHENA_CORE_NUMBER=8
[2025-12-14 07:18:12] Starting ATLAS job with PandaID=6929365460
[2025-12-14 07:18:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 10:23:53]  *** The last 200 lines of the pilot log: ***
[2025-12-14 10:23:53] 2025-12-14 15:22:52,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 10:23:53] 2025-12-14 15:22:52,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 10:23:53] 2025-12-14 15:22:52,931 | INFO     | fitting pss+swap vs Time
[2025-12-14 10:23:53] 2025-12-14 15:22:52,932 | INFO     | sum of square deviations: 1838657730.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,933 | INFO     | sum of deviations: 31727551677.999996
[2025-12-14 10:23:53] 2025-12-14 15:22:52,933 | INFO     | mean x: 1765720231.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,933 | INFO     | mean y: 2477888.5138121545
[2025-12-14 10:23:53] 2025-12-14 15:22:52,933 | INFO     | intersect: -30466477243.19664
[2025-12-14 10:23:53] 2025-12-14 15:22:52,933 | INFO     | chi2: 1.4146040537275337
[2025-12-14 10:23:53] 2025-12-14 15:22:52,934 | INFO     | sum of square deviations: 1690450300.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,935 | INFO     | sum of deviations: 30832591672.5
[2025-12-14 10:23:53] 2025-12-14 15:22:52,935 | INFO     | mean x: 1765720078.5
[2025-12-14 10:23:53] 2025-12-14 15:22:52,936 | INFO     | mean y: 2476967.4375
[2025-12-14 10:23:53] 2025-12-14 15:22:52,936 | INFO     | intersect: -32202981062.488102
[2025-12-14 10:23:53] 2025-12-14 15:22:52,936 | INFO     | chi2: 1.4149063064277783
[2025-12-14 10:23:53] 2025-12-14 15:22:52,936 | INFO     | current chi2=1.4149063064277783 (change=-0.02136659367319674 %)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,936 | INFO     | right removable region: 175
[2025-12-14 10:23:53] 2025-12-14 15:22:52,937 | INFO     | sum of square deviations: 1690450300.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,937 | INFO     | sum of deviations: 6343427210.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,938 | INFO     | mean x: 1765720383.5
[2025-12-14 10:23:53] 2025-12-14 15:22:52,938 | INFO     | mean y: 2503650.409090909
[2025-12-14 10:23:53] 2025-12-14 15:22:52,938 | INFO     | intersect: -6623375102.693284
[2025-12-14 10:23:53] 2025-12-14 15:22:52,938 | INFO     | chi2: 0.08096125339236482
[2025-12-14 10:23:53] 2025-12-14 15:22:52,938 | INFO     | current chi2=0.08096125339236482 (change=94.27675516841417 %)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,939 | INFO     | sum of square deviations: 1550429070.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,940 | INFO     | sum of deviations: 855332849.9999994
[2025-12-14 10:23:53] 2025-12-14 15:22:52,940 | INFO     | mean x: 1765720536.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,940 | INFO     | mean y: 2509689.0994152045
[2025-12-14 10:23:53] 2025-12-14 15:22:52,940 | INFO     | intersect: -971594065.5214953
[2025-12-14 10:23:53] 2025-12-14 15:22:52,940 | INFO     | chi2: 0.030903968766933056
[2025-12-14 10:23:53] 2025-12-14 15:22:52,940 | INFO     | current chi2=0.030903968766933056 (change=61.8286927733662 %)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,941 | INFO     | sum of square deviations: 1418361477.5
[2025-12-14 10:23:53] 2025-12-14 15:22:52,942 | INFO     | sum of deviations: -2182492526.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,942 | INFO     | mean x: 1765720688.5
[2025-12-14 10:23:53] 2025-12-14 15:22:52,942 | INFO     | mean y: 2513144.481927711
[2025-12-14 10:23:53] 2025-12-14 15:22:52,942 | INFO     | intersect: 2719501914.1200433
[2025-12-14 10:23:53] 2025-12-14 15:22:52,942 | INFO     | chi2: 0.004441155526896388
[2025-12-14 10:23:53] 2025-12-14 15:22:52,942 | INFO     | current chi2=0.004441155526896388 (change=85.62917416727271 %)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,943 | INFO     | sum of square deviations: 1294014960.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,943 | INFO     | sum of deviations: -2508144442.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,944 | INFO     | mean x: 1765720841.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,944 | INFO     | mean y: 2513540.795031056
[2025-12-14 10:23:53] 2025-12-14 15:22:52,944 | INFO     | intersect: 3424949177.4570026
[2025-12-14 10:23:53] 2025-12-14 15:22:52,944 | INFO     | chi2: 0.004037102413856539
[2025-12-14 10:23:53] 2025-12-14 15:22:52,944 | INFO     | current chi2=0.004037102413856539 (change=9.097927568463545 %)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,944 | INFO     | left removable region: 40
[2025-12-14 10:23:53] 2025-12-14 15:22:52,945 | INFO     | sum of square deviations: 762879420.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,945 | INFO     | sum of deviations: -1138982361.999999
[2025-12-14 10:23:53] 2025-12-14 15:22:52,945 | INFO     | mean x: 1765721268.0
[2025-12-14 10:23:53] 2025-12-14 15:22:52,946 | INFO     | mean y: 2511583.1407407406
[2025-12-14 10:23:53] 2025-12-14 15:22:52,946 | INFO     | intersect: 2638741277.815521
[2025-12-14 10:23:53] 2025-12-14 15:22:52,946 | INFO     | chi2: 0.0035957672054277045
[2025-12-14 10:23:53] 2025-12-14 15:22:52,946 | INFO     | current memory leak: -1.49 B/s (using 135 data points, chi2=0.00)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,946 | INFO     | could have reported an average CPU frequency of 1983 MHz (10 samples)
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | ..............................
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . Timing measurements:
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . get job = 0 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . initial setup = 2 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . payload setup = 8 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . stage-in = 0 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . payload execution = 11023 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,947 | INFO     | . stage-out = 2 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,948 | INFO     | . log creation = 0 s
[2025-12-14 10:23:53] 2025-12-14 15:22:52,948 | INFO     | ..............................
[2025-12-14 10:23:53] 2025-12-14 15:22:53,037 | INFO     | 
[2025-12-14 10:23:53] 2025-12-14 15:22:53,037 | INFO     | job summary report
[2025-12-14 10:23:53] 2025-12-14 15:22:53,038 | INFO     | --------------------------------------------------
[2025-12-14 10:23:53] 2025-12-14 15:22:53,038 | INFO     | PanDA job id: 6929365460
[2025-12-14 10:23:53] 2025-12-14 15:22:53,038 | INFO     | task id: 47898763
[2025-12-14 10:23:53] 2025-12-14 15:22:53,038 | INFO     | errors: (none)
[2025-12-14 10:23:53] 2025-12-14 15:22:53,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 10:23:53] 2025-12-14 15:22:53,038 | INFO     | pilot state: finished 
[2025-12-14 10:23:53] 2025-12-14 15:22:53,039 | INFO     | transexitcode: 0
[2025-12-14 10:23:53] 2025-12-14 15:22:53,039 | INFO     | exeerrorcode: 0
[2025-12-14 10:23:53] 2025-12-14 15:22:53,039 | INFO     | exeerrordiag: 
[2025-12-14 10:23:53] 2025-12-14 15:22:53,039 | INFO     | exitcode: 0
[2025-12-14 10:23:53] 2025-12-14 15:22:53,039 | INFO     | exitmsg: OK
[2025-12-14 10:23:53] 2025-12-14 15:22:53,040 | INFO     | cpuconsumptiontime: 81765 s
[2025-12-14 10:23:53] 2025-12-14 15:22:53,040 | INFO     | nevents: 400
[2025-12-14 10:23:53] 2025-12-14 15:22:53,040 | INFO     | neventsw: 0
[2025-12-14 10:23:53] 2025-12-14 15:22:53,040 | INFO     | pid: 1487
[2025-12-14 10:23:53] 2025-12-14 15:22:53,040 | INFO     | pgrp: 1487
[2025-12-14 10:23:53] 2025-12-14 15:22:53,040 | INFO     | corecount: 8
[2025-12-14 10:23:53] 2025-12-14 15:22:53,041 | INFO     | event service: False
[2025-12-14 10:23:53] 2025-12-14 15:22:53,041 | INFO     | sizes: {0: 2283950, 6: 2284212, 11: 2284240, 11034: 2313409, 11035: 2313408, 11037: 2322462, 11040: 2322646, 11046: 2322840}
[2025-12-14 10:23:53] 2025-12-14 15:22:53,041 | INFO     | --------------------------------------------------
[2025-12-14 10:23:53] 2025-12-14 15:22:53,041 | INFO     | 
[2025-12-14 10:23:53] 2025-12-14 15:22:53,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 10:23:53] 2025-12-14 15:22:53,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 10:23:53] 2025-12-14 15:22:53,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 10:23:53] 2025-12-14 15:22:53,074 | INFO     | job 6929365460 has completed (purged errors)
[2025-12-14 10:23:53] 2025-12-14 15:22:53,074 | INFO     | overall cleanup function is called
[2025-12-14 10:23:53] 2025-12-14 15:22:54,082 | INFO     | --- collectZombieJob: --- 10, [1487]
[2025-12-14 10:23:53] 2025-12-14 15:22:54,083 | INFO     | zombie collector waiting for pid 1487
[2025-12-14 10:23:53] 2025-12-14 15:22:54,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 10:23:53] 2025-12-14 15:22:54,083 | INFO     | collected zombie processes
[2025-12-14 10:23:53] 2025-12-14 15:22:54,083 | INFO     | will attempt to kill all subprocesses of pid=1487
[2025-12-14 10:23:53] 2025-12-14 15:22:54,171 | INFO     | process IDs to be killed: [1487] (in reverse order)
[2025-12-14 10:23:53] 2025-12-14 15:22:54,228 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 10:23:53] 2025-12-14 15:22:54,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 10:23:53] 2025-12-14 15:22:54,233 | INFO     | did not find any defunct processes belonging to 1487
[2025-12-14 10:23:53] 2025-12-14 15:22:54,237 | INFO     | did not find any defunct processes belonging to 1487
[2025-12-14 10:23:53] 2025-12-14 15:22:54,237 | INFO     | ready for new job
[2025-12-14 10:23:53] 2025-12-14 15:22:54,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 10:23:53] 2025-12-14 15:22:54,239 | INFO     | ***************************************
[2025-12-14 10:23:53] 2025-12-14 15:22:54,239 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 10:23:53] 2025-12-14 15:22:54,239 | INFO     | ***************************************
[2025-12-14 10:23:53] 2025-12-14 15:22:54,239 | INFO     | 
[2025-12-14 10:23:53] 2025-12-14 15:22:54,240 | INFO     | architecture information:
[2025-12-14 10:23:53] 2025-12-14 15:22:54,240 | INFO     | executing command: cat /etc/os-release
[2025-12-14 10:23:53] 2025-12-14 15:22:54,257 | INFO     | cat /etc/os-release:
[2025-12-14 10:23:53] NAME="CentOS Linux"
[2025-12-14 10:23:53] VERSION="7 (Core)"
[2025-12-14 10:23:53] ID="centos"
[2025-12-14 10:23:53] ID_LIKE="rhel fedora"
[2025-12-14 10:23:53] VERSION_ID="7"
[2025-12-14 10:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 10:23:53] ANSI_COLOR="0;31"
[2025-12-14 10:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 10:23:53] HOME_URL="https://www.centos.org/"
[2025-12-14 10:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 10:23:53] 
[2025-12-14 10:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 10:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 10:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 10:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 10:23:53] 
[2025-12-14 10:23:53] 2025-12-14 15:22:54,258 | INFO     | ***************************************
[2025-12-14 10:23:53] 2025-12-14 15:22:54,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 10:23:53] 2025-12-14 15:22:54,780 | INFO     | sufficient remaining disk space (18540920832 B)
[2025-12-14 10:23:53] 2025-12-14 15:22:54,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 10:23:53] 2025-12-14 15:22:54,781 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 10:23:53] 2025-12-14 15:22:54,781 | INFO     | update_server=False
[2025-12-14 10:23:53] 2025-12-14 15:22:54,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 10:23:53] 2025-12-14 15:22:54,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:23:53] 2025-12-14 15:22:54,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 10:23:53] 2025-12-14 15:22:54,910 | INFO     | all payload control threads have been joined
[2025-12-14 10:23:53] 2025-12-14 15:22:55,211 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 10:23:53] 2025-12-14 15:22:55,211 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 10:23:53] 2025-12-14 15:22:55,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:23:53] 2025-12-14 15:22:55,212 | INFO     | will abort loop
[2025-12-14 10:23:53] 2025-12-14 15:22:55,734 | INFO     | all data control threads have been joined
[2025-12-14 10:23:53] 2025-12-14 15:22:55,787 | INFO     | [job] retrieve thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:55,788 | INFO     | [job] queue monitor thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:55,896 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:55,916 | INFO     | [payload] control thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:55,941 | INFO     | all job control threads have been joined
[2025-12-14 10:23:53] 2025-12-14 15:22:56,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,077 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,084 | INFO     | [data] copytool_in thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,164 | INFO     | [payload] failed_post thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,217 | INFO     | [job] job monitor thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,740 | INFO     | [data] control thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,788 | INFO     | [data] copytool_out thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,894 | INFO     | [payload] validate_post thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:56,947 | INFO     | [job] control thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:57,003 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:57,156 | INFO     | [job] validate thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:22:57,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 10:23:53] 2025-12-14 15:23:01,645 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 10:23:53] 2025-12-14 15:23:24,668 | INFO     | PID=27520 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 10:23:53] 2025-12-14 15:23:24,669 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 10:23:53] 2025-12-14 15:23:24,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 10:23:53] 2025-12-14 15:23:24,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 10:23:53] 2025-12-14 15:23:46,859 | INFO     | [monitor] cgroup control has ended
[2025-12-14 10:23:53] 2025-12-14 15:23:47,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897694885696)>', '<ExcThread(monitor, started 139896748504832)>']
[2025-12-14 10:23:53] 2025-12-14 15:23:47,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 10:23:53] 2025-12-14 15:23:47,788 | INFO     | [monitor] control thread has ended
[2025-12-14 10:23:53] 2025-12-14 15:23:52,761 | INFO     | all workflow threads have been joined
[2025-12-14 10:23:53] 2025-12-14 15:23:52,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 10:23:53] 2025-12-14 15:23:52,762 | INFO     | traces error code: 0
[2025-12-14 10:23:53] 2025-12-14 15:23:52,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 10:23:53] 2025-12-14 15:23:52,887 [wrapper] ==== pilot stdout END ====
[2025-12-14 10:23:53] 2025-12-14 15:23:52,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 10:23:53] 2025-12-14 15:23:52,896 [wrapper] pilotpid: 27520
[2025-12-14 10:23:53] 2025-12-14 15:23:52,901 [wrapper] Pilot exit status: 0
[2025-12-14 10:23:53] 2025-12-14 15:23:52,920 [wrapper] pandaids: 6929365460
[2025-12-14 10:23:53] 2025-12-14 15:23:52,972 [wrapper] cleanup supervisor_pilot 13137 27521
[2025-12-14 10:23:53] 2025-12-14 15:23:52,977 [wrapper] Test setup, not cleaning
[2025-12-14 10:23:53] 2025-12-14 15:23:52,983 [wrapper] apfmon messages muted
[2025-12-14 10:23:53] 2025-12-14 15:23:52,988 [wrapper] ==== wrapper stdout END ====
[2025-12-14 10:23:53] 2025-12-14 15:23:52,992 [wrapper] ==== wrapper stderr END ====
[2025-12-14 10:23:53]  *** Error codes and diagnostics ***
[2025-12-14 10:23:53]     "exeErrorCode": 0,
[2025-12-14 10:23:53]     "exeErrorDiag": "",
[2025-12-14 10:23:53]     "pilotErrorCode": 0,
[2025-12-14 10:23:53]     "pilotErrorDiag": "",
[2025-12-14 10:23:53]  *** Listing of results directory ***
[2025-12-14 10:23:53] total 440028
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 20:02 queuedata.json
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 20:02 pilot3.tar.gz
[2025-12-14 10:23:53] -rwx------ 1 boincer umatlas     36322 Dec 13 20:02 runpilot2-wrapper.sh
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas       100 Dec 14 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 10:23:53] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 07:18 run_atlas
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas       105 Dec 14 07:18 job.xml
[2025-12-14 10:23:53] -rw-r--r-- 2 boincer umatlas 224016516 Dec 14 07:18 EVNT.47898761._000180.pool.root.1
[2025-12-14 10:23:53] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 07:18 start_atlas.sh
[2025-12-14 10:23:53] drwxrwx--x 2 boincer umatlas      4096 Dec 14 07:18 shared
[2025-12-14 10:23:53] -rw-r--r-- 2 boincer umatlas    592396 Dec 14 07:18 input.tar.gz
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas         0 Dec 14 07:18 boinc_lockfile
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas      2503 Dec 14 07:18 pandaJob.out
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas        57 Dec 14 07:18 setup.sh.local
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas    991728 Dec 14 07:18 agis_schedconf.cvmfs.json
[2025-12-14 10:23:53] drwx------ 5 boincer umatlas      4096 Dec 14 07:18 pilot3
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas      5911 Dec 14 10:21 init_data.xml
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas 218762850 Dec 14 10:22 HITS.47898763._007604.pool.root.1
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas       530 Dec 14 10:22 boinc_task_state.xml
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas      1063 Dec 14 10:22 memory_monitor_summary.json
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas   1516240 Dec 14 10:22 agis_ddmendpoints.agis.ALL.json
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas    406753 Dec 14 10:22 log.47898763._007604.job.log.tgz.1
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas      7845 Dec 14 10:22 heartbeat.json
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas        95 Dec 14 10:23 pilot_heartbeat.json
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 10:23 boinc_mmap_file
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas        28 Dec 14 10:23 wrapper_checkpoint.txt
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas      4932 Dec 14 10:23 pilotlog.txt
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas   1536947 Dec 14 10:23 log.47898763._007604.job.log.1
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas       357 Dec 14 10:23 output.list
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas       620 Dec 14 10:23 runtime_log
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas   1966080 Dec 14 10:23 result.tar.gz
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 10:23 runtime_log.err
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas       662 Dec 14 10:23 HluNDmRgpo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7VUKDm3NWyjn.diag
[2025-12-14 10:23:53] -rw-r--r-- 1 boincer umatlas     20912 Dec 14 10:23 stderr.txt
[2025-12-14 10:23:53] HITS file was successfully produced:
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas 218762850 Dec 14 10:22 shared/HITS.pool.root.1
[2025-12-14 10:23:53]  *** Contents of shared directory: ***
[2025-12-14 10:23:53] total 434924
[2025-12-14 10:23:53] -rw-r--r-- 2 boincer umatlas 224016516 Dec 14 07:18 ATLAS.root_0
[2025-12-14 10:23:53] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 07:18 start_atlas.sh
[2025-12-14 10:23:53] -rw-r--r-- 2 boincer umatlas    592396 Dec 14 07:18 input.tar.gz
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas 218762850 Dec 14 10:22 HITS.pool.root.1
[2025-12-14 10:23:53] -rw------- 1 boincer umatlas   1966080 Dec 14 10:23 result.tar.gz
10:23:54 (23848): run_atlas exited; CPU time 81713.409546
10:23:54 (23848): called boinc_finish(0)

</stderr_txt>
]]>

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