Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-15 15:13:19 (16356): vboxwrapper version 26210
2025-12-15 15:13:19 (16356): BOINC client version: 8.2.8
2025-12-15 15:13:20 (16356): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-12-15 15:13:21 (16356): Successfully copied 'init_data.xml' to the shared directory.
2025-12-15 15:13:21 (16356): Create VM. (boinc_0987f73fbab95da9, slot#4)
2025-12-15 15:13:22 (16356): Setting Memory Size for VM. (4400MB)
2025-12-15 15:13:22 (16356): Setting CPU Count for VM. (4)
2025-12-15 15:13:23 (16356): Setting Chipset Options for VM.
2025-12-15 15:13:23 (16356): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-15 15:13:23 (16356): Setting Boot Options for VM.
2025-12-15 15:13:24 (16356): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-15 15:13:24 (16356): Enabling VM Network Access.
2025-12-15 15:13:24 (16356): Disabling USB Support for VM.
2025-12-15 15:13:25 (16356): Disabling COM Port Support for VM.
2025-12-15 15:13:25 (16356): Disabling LPT Port Support for VM.
2025-12-15 15:13:25 (16356): Disabling Audio Support for VM.
2025-12-15 15:13:25 (16356): Disabling Clipboard Support for VM.
2025-12-15 15:13:26 (16356): Disabling Drag and Drop Support for VM.
2025-12-15 15:13:26 (16356): Adding storage controller(s) to VM.
2025-12-15 15:13:26 (16356): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-15 15:13:29 (16356): Adding VirtualBox Guest Additions to VM.
2025-12-15 15:13:29 (16356): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-15 15:13:29 (16356): forwarding host port 56132 to guest port 80
2025-12-15 15:13:29 (16356): Enabling remote desktop for VM.
2025-12-15 15:13:30 (16356): Required extension pack not installed, remote desktop not enabled.
2025-12-15 15:13:30 (16356): Enabling shared directory for VM.
2025-12-15 15:13:30 (16356): Starting VM using VBoxManage interface. (boinc_0987f73fbab95da9, slot#4)
2025-12-15 15:13:35 (16356): Successfully started VM. (PID = '17364')
2025-12-15 15:13:35 (16356): Reporting VM Process ID to BOINC.
2025-12-15 15:13:35 (16356): Guest Log: BIOS: VirtualBox 7.1.6
2025-12-15 15:13:35 (16356): Guest Log: CPUID EDX: 0x178bfbff
2025-12-15 15:13:35 (16356): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-15 15:13:35 (16356): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-15 15:13:35 (16356): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-15 15:13:35 (16356): Detected: Web Application Enabled (http://localhost:56132)
2025-12-15 15:13:35 (16356): Preference change detected
2025-12-15 15:13:35 (16356): Setting CPU throttle for VM. (97%)
2025-12-15 15:13:35 (16356): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-15 15:13:37 (16356): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-15 15:13:37 (16356): Guest Log: BIOS: Booting from Hard Disk...
2025-12-15 15:13:40 (16356): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-15 15:13:40 (16356): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-15 15:13:40 (16356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-15 15:13:45 (16356): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-15 15:13:45 (16356): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-15 15:13:49 (16356): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000131 main     Log opened 2025-12-15T15:13:46.947868000Z
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000202 main     OS Product: Linux
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000223 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000235 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000246 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000247 main     Process ID: 1309
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.000247 main     Package type: LINUX_64BITS_GENERIC
2025-12-15 15:13:49 (16356): Guest Log: 00:00:00.001003 main     5.2.32 r132073 started. Verbose level = 0
2025-12-15 15:13:49 (16356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-15 15:13:49 (16356): Guest Log: [INFO] Mounting shared directory
2025-12-15 15:13:49 (16356): Guest Log: [INFO] Checking for init_data.xml
2025-12-15 15:13:51 (16356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-15 15:13:51 (16356): Guest Log: [INFO] Detected branch: prod
2025-12-15 15:13:51 (16356): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-15 15:13:51 (16356): Guest Log: Copying input files
2025-12-15 15:13:52 (16356): Guest Log: Copied input files into RunAtlas.
2025-12-15 15:13:52 (16356): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-15 15:13:52 (16356): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-15 15:13:52 (16356): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-15 15:13:52 (16356): Guest Log: Further information can be found at the LHC@home message board.
2025-12-15 15:14:00 (16356): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-15 15:14:00 (16356): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-15 15:14:00 (16356): Guest Log: 2.6.3.0 1585 0 32172 154036 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-15 15:14:01 (16356): Guest Log: copied the webapp to /var/www
2025-12-15 15:14:01 (16356): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-15 15:14:01 (16356): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-15 15:14:02 (16356): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-15 15:14:02 (16356): Guest Log:  *** Starting ATLAS job. (PandaID=6929302711 taskID=47898763) ***
2025-12-15 16:16:50 (16356): Guest Log:  *** Job finished ***
2025-12-15 16:16:50 (16356): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:25,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:25,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:42,368 | INFO     | [monitor] cgroup control has ended
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:43,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371015169856)>', '<ExcThread(monitor, started 140370042144512)>']
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:44,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:44,179 | INFO     | [monitor] control thread has ended
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,486 | INFO     | all workflow threads have been joined
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,487 | INFO     | end of generic workflow (traces error code: 0)
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,487 | INFO     | traces error code: 0
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,637 [wrapper] ==== pilot stdout END ====
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,641 [wrapper] ==== wrapper stdout RESUME ====
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,645 [wrapper] pilotpid: 5987
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,648 [wrapper] Pilot exit status: 0
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,712 [wrapper] pandaids: 6929302711
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,730 [wrapper] cleanup supervisor_pilot 22221 5988
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,734 [wrapper] Test setup, not cleaning
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,737 [wrapper] apfmon messages muted
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,740 [wrapper] ==== wrapper stdout END ====
2025-12-15 16:16:50 (16356): Guest Log: 2025-12-15 16:16:48,744 [wrapper] ==== wrapper stderr END ====
2025-12-15 16:16:50 (16356): Guest Log:  *** Error codes and diagnostics ***
2025-12-15 16:16:50 (16356): Guest Log:     "exeErrorCode": 0,
2025-12-15 16:16:50 (16356): Guest Log:     "exeErrorDiag": "",
2025-12-15 16:16:50 (16356): Guest Log:     "pilotErrorCode": 0,
2025-12-15 16:16:50 (16356): Guest Log:     "pilotErrorDiag": "",
2025-12-15 16:16:50 (16356): Guest Log:  *** Listing of results directory ***
2025-12-15 16:16:50 (16356): Guest Log: total 223980
2025-12-15 16:16:50 (16356): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 13 11:35 pilot3.tar.gz
2025-12-15 16:16:50 (16356): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 13 11:37 runpilot2-wrapper.sh
2025-12-15 16:16:50 (16356): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 13 11:38 queuedata.json
2025-12-15 16:16:50 (16356): Guest Log: -rwxr-xr-x. 1 atlas atlas     11922 Dec 15 15:13 init_data.xml
2025-12-15 16:16:50 (16356): Guest Log: -rwxr-xr-x. 1 atlas atlas    592395 Dec 15 15:13 input.tar.gz
2025-12-15 16:16:50 (16356): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 15 15:13 start_atlas.sh
2025-12-15 16:16:50 (16356): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 15 15:13 EVNT.47898761._000264.pool.root.1 -> /data/./ATLAS.root_0
2025-12-15 16:16:50 (16356): Guest Log: -rw-r--r--. 1 atlas atlas      2505 Dec 15 15:14 pandaJob.out
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas    994497 Dec 15 15:14 agis_schedconf.cvmfs.json
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 15 15:14 agis_ddmendpoints.agis.ALL.json
2025-12-15 16:16:50 (16356): Guest Log: drwx------. 5 atlas atlas      4096 Dec 15 15:14 pilot3
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas 223962795 Dec 15 16:15 HITS.47898763._004706.pool.root.1
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas      1022 Dec 15 16:15 memory_monitor_summary.json
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas    238610 Dec 15 16:15 log.47898763._004706.job.log.tgz.1
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas      7755 Dec 15 16:15 heartbeat.json
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas        95 Dec 15 16:16 pilot_heartbeat.json
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas      4877 Dec 15 16:16 pilotlog.txt
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas    532579 Dec 15 16:16 log.47898763._004706.job.log.1
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas       357 Dec 15 16:16 output.list
2025-12-15 16:16:50 (16356): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 15 16:16 runtime_log
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas    788480 Dec 15 16:16 result.tar.gz
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas       650 Dec 15 16:16 wj5NDmS7co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrCPKDmrVxnKn.diag
2025-12-15 16:16:50 (16356): Guest Log: -rw-r--r--. 1 atlas atlas      8733 Dec 15 16:16 runtime_log.err
2025-12-15 16:16:50 (16356): Guest Log: Looking for outputfile HITS.47898763._004706.pool.root.1
2025-12-15 16:16:50 (16356): Guest Log: HITS file was successfully produced
2025-12-15 16:16:50 (16356): Guest Log: -rw-------. 1 atlas atlas 223962795 Dec 15 16:15 /home/atlas/RunAtlas/HITS.47898763._004706.pool.root.1
2025-12-15 16:16:52 (16356): Guest Log: Successfully finished the ATLAS job!
2025-12-15 16:16:52 (16356): Guest Log: Copying the results back to the shared directory!
2025-12-15 16:16:52 (16356): Guest Log:  *** Contents of shared directory: ***
2025-12-15 16:16:52 (16356): Guest Log: total 438976
2025-12-15 16:16:52 (16356): Guest Log: -rwxrwxrwx. 1 root root 224130516 Dec 15 15:13 ATLAS.root_0
2025-12-15 16:16:52 (16356): Guest Log: -rwxrwxrwx. 1 root root 223962795 Dec 15 16:16 HITS.pool.root.1
2025-12-15 16:16:52 (16356): Guest Log: -rwxrwxrwx. 1 root root     11922 Dec 15 15:13 init_data.xml
2025-12-15 16:16:52 (16356): Guest Log: -rwxrwxrwx. 1 root root    592395 Dec 14 12:24 input.tar.gz
2025-12-15 16:16:52 (16356): Guest Log: -rwxrwxrwx. 1 root root    788480 Dec 15 16:16 result.tar.gz
2025-12-15 16:16:52 (16356): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 14 12:24 start_atlas.sh
2025-12-15 16:16:52 (16356): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-15 16:16:53 (16356): VM Completion File Detected.
2025-12-15 16:16:53 (16356): Powering off VM.
2025-12-15 16:16:54 (16356): Successfully stopped VM.
2025-12-15 16:16:54 (16356): Deregistering VM. (boinc_0987f73fbab95da9, slot#4)
2025-12-15 16:16:54 (16356): Removing network bandwidth throttle group from VM.
2025-12-15 16:16:54 (16356): Removing VM from VirtualBox.
2025-12-15 16:16:59 (16356): called boinc_finish(0)

</stderr_txt>
]]>

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