Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:07:10 (1106637): wrapper (7.7.26015): starting
15:07:10 (1106637): wrapper: running run_atlas (--nthreads 2)
[2025-12-14 15:07:10] Arguments: --nthreads 2
[2025-12-14 15:07:10] Threads: 2
[2025-12-14 15:07:10] Checking for CVMFS
[2025-12-14 15:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 15:07:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 15:07:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 15:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 15:07:10] 2.9.2.0 769479 1754 58300 153997 1 57 35474660 36864000 0 130560 0 889007 99.986 62748 4127 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-14 15:07:10] CVMFS is ok
[2025-12-14 15:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 15:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 15:07:10] Further information can be found at the LHC@home message board.
[2025-12-14 15:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 15:07:10] Checking for apptainer binary...
[2025-12-14 15:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 15:07:10] Running /usr/bin/apptainer --version
[2025-12-14 15:07:10] apptainer version 1.4.1-1.1
[2025-12-14 15:07:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 15:07:10] thA337
[2025-12-14 15:07:10] apptainer works
[2025-12-14 15:07:10] Set ATHENA_PROC_NUMBER=2
[2025-12-14 15:07:10] Set ATHENA_CORE_NUMBER=2
[2025-12-14 15:07:10] Starting ATLAS job with PandaID=6929308170
[2025-12-14 15:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 17:58:03]  *** The last 200 lines of the pilot log: ***
[2025-12-14 17:58:03] 2025-12-14 16:57:33,440 | INFO     | [job] queue monitor thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:33,487 | INFO     | all data control threads have been joined
[2025-12-14 17:58:03] 2025-12-14 16:57:33,649 | INFO     | [job] job monitor thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:33,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 17:58:03] 2025-12-14 16:57:33,745 | INFO     | all payload control threads have been joined
[2025-12-14 17:58:03] 2025-12-14 16:57:33,746 | INFO     | all job control threads have been joined
[2025-12-14 17:58:03] 2025-12-14 16:57:33,916 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:33,967 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,108 | INFO     | [job] validate thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,234 | INFO     | [payload] failed_post thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,493 | INFO     | [data] control thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,554 | INFO     | [data] copytool_in thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,751 | INFO     | [payload] control thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,752 | INFO     | [job] control thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,784 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:34,824 | INFO     | [payload] validate_post thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:35,676 | INFO     | [data] copytool_out thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:35,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 17:58:03] 2025-12-14 16:57:36,439 | INFO     | [monitor] cgroup control has ended
[2025-12-14 17:58:03] 2025-12-14 16:57:39,698 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:42,821 | INFO     | job.realtimelogging is not enabled
[2025-12-14 17:58:03] 2025-12-14 16:57:43,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 17:58:03] 2025-12-14 16:57:44,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497459468096)>', '<ExcThread(monitor, started 140496701748992)>']
[2025-12-14 17:58:03] 2025-12-14 16:57:49,418 | INFO     | all workflow threads have been joined
[2025-12-14 17:58:03] 2025-12-14 16:57:49,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 17:58:03] 2025-12-14 16:57:49,419 | INFO     | traces error code: 0
[2025-12-14 17:58:03] 2025-12-14 16:57:49,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 17:58:03] 2025-12-14 16:58:03,151 | INFO     | PID=1110346 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 17:58:03] 2025-12-14 16:58:03,151 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 17:58:03] 2025-12-14 16:58:03,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 17:58:03] 2025-12-14 16:58:03,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 17:58:03] 2025-12-14 16:58:03,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 17:58:03] 2025-12-14 16:58:03,151 | INFO     | [monitor] control thread has ended
[2025-12-14 17:58:03] 2025-12-14 16:58:03,191 [wrapper] ==== pilot stdout END ====
[2025-12-14 17:58:03] 2025-12-14 16:58:03,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 17:58:03] 2025-12-14 16:58:03,195 [wrapper] pilotpid: 1110346
[2025-12-14 17:58:03] 2025-12-14 16:58:03,197 [wrapper] Pilot exit status: 0
[2025-12-14 17:58:03] 2025-12-14 16:58:03,202 [wrapper] pandaids: 6929308170
[2025-12-14 17:58:03] 2025-12-14 16:58:03,213 [wrapper] cleanup supervisor_pilot 1135536 1110347
[2025-12-14 17:58:03] 2025-12-14 16:58:03,215 [wrapper] Test setup, not cleaning
[2025-12-14 17:58:03] 2025-12-14 16:58:03,217 [wrapper] apfmon messages muted
[2025-12-14 17:58:03] 2025-12-14 16:58:03,219 [wrapper] ==== wrapper stdout END ====
[2025-12-14 17:58:03] 2025-12-14 16:58:03,221 [wrapper] ==== wrapper stderr END ====
[2025-12-14 17:58:03]  *** Error codes and diagnostics ***
[2025-12-14 17:58:03]     "exeErrorCode": 0,
[2025-12-14 17:58:03]     "exeErrorDiag": "",
[2025-12-14 17:58:03]     "pilotErrorCode": 0,
[2025-12-14 17:58:03]     "pilotErrorDiag": "",
[2025-12-14 17:58:03]  *** Listing of results directory ***
[2025-12-14 17:58:03] total 410136
[2025-12-14 17:58:03] -rwx------ 1 boinc boinc     36322 Dec 13 12:39 runpilot2-wrapper.sh
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc      5112 Dec 13 12:44 queuedata.json
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc    579449 Dec 13 12:45 pilot3.tar.gz
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc       100 Dec 14 15:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 17:58:03] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 15:07 run_atlas
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc       105 Dec 14 15:07 job.xml
[2025-12-14 17:58:03] -rw-r--r-- 2 boinc boinc 214799966 Dec 14 15:07 EVNT.47898833._000075.pool.root.1
[2025-12-14 17:58:03] -rw-r--r-- 2 boinc boinc    592401 Dec 14 15:07 input.tar.gz
[2025-12-14 17:58:03] -rw-r--r-- 2 boinc boinc     15847 Dec 14 15:07 start_atlas.sh
[2025-12-14 17:58:03] drwxrwx--x 2 boinc boinc      4096 Dec 14 15:07 shared
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc         0 Dec 14 15:07 boinc_setup_complete
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc      6206 Dec 14 15:07 init_data.xml
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc         0 Dec 14 15:07 boinc_lockfile
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc      2549 Dec 14 15:07 pandaJob.out
[2025-12-14 17:58:03] -rw------- 1 boinc boinc    991736 Dec 14 15:07 agis_schedconf.cvmfs.json
[2025-12-14 17:58:03] -rw------- 1 boinc boinc   1516240 Dec 14 15:07 agis_ddmendpoints.agis.ALL.json
[2025-12-14 17:58:03] drwx------ 5 boinc boinc      4096 Dec 14 15:07 pilot3
[2025-12-14 17:58:03] -rw------- 1 boinc boinc 197731279 Dec 14 17:56 HITS.47898836._001368.pool.root.1
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc       530 Dec 14 17:57 boinc_task_state.xml
[2025-12-14 17:58:03] -rw------- 1 boinc boinc        95 Dec 14 17:57 pilot_heartbeat.json
[2025-12-14 17:58:03] -rw------- 1 boinc boinc      1017 Dec 14 17:57 memory_monitor_summary.json
[2025-12-14 17:58:03] -rw------- 1 boinc boinc    319672 Dec 14 17:57 log.47898836._001368.job.log.tgz.1
[2025-12-14 17:58:03] -rw------- 1 boinc boinc      7747 Dec 14 17:57 heartbeat.json
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc      8192 Dec 14 17:58 boinc_mmap_file
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc        28 Dec 14 17:58 wrapper_checkpoint.txt
[2025-12-14 17:58:03] -rw------- 1 boinc boinc       747 Dec 14 17:58 pilotlog.txt
[2025-12-14 17:58:03] -rw------- 1 boinc boinc   1453723 Dec 14 17:58 log.47898836._001368.job.log.1
[2025-12-14 17:58:03] -rw------- 1 boinc boinc       357 Dec 14 17:58 output.list
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc       620 Dec 14 17:58 runtime_log
[2025-12-14 17:58:03] -rw------- 1 boinc boinc   1792000 Dec 14 17:58 result.tar.gz
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc      8898 Dec 14 17:58 runtime_log.err
[2025-12-14 17:58:03] -rw------- 1 boinc boinc       661 Dec 14 17:58 oeKMDmm9co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2NPKDmGbjFSn.diag
[2025-12-14 17:58:03] -rw-r--r-- 1 boinc boinc      6863 Dec 14 17:58 stderr.txt
[2025-12-14 17:58:03] HITS file was successfully produced:
[2025-12-14 17:58:03] -rw------- 1 boinc boinc 197731279 Dec 14 17:56 shared/HITS.pool.root.1
[2025-12-14 17:58:03]  *** Contents of shared directory: ***
[2025-12-14 17:58:03] total 405224
[2025-12-14 17:58:03] -rw-r--r-- 2 boinc boinc 214799966 Dec 14 15:07 ATLAS.root_0
[2025-12-14 17:58:03] -rw-r--r-- 2 boinc boinc    592401 Dec 14 15:07 input.tar.gz
[2025-12-14 17:58:03] -rw-r--r-- 2 boinc boinc     15847 Dec 14 15:07 start_atlas.sh
[2025-12-14 17:58:03] -rw------- 1 boinc boinc 197731279 Dec 14 17:56 HITS.pool.root.1
[2025-12-14 17:58:03] -rw------- 1 boinc boinc   1792000 Dec 14 17:58 result.tar.gz
17:58:04 (1106637): run_atlas exited; CPU time 20001.872493
17:58:04 (1106637): called boinc_finish(0)

</stderr_txt>
]]>

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