Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:21:56 (1060885): wrapper (7.7.26015): starting
07:21:56 (1060885): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 07:21:56] Arguments: --nthreads 8
[2025-12-14 07:21:56] Threads: 8
[2025-12-14 07:21:56] Checking for CVMFS
[2025-12-14 07:21:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 07:21:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 07:21:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 07:21:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 07:21:56] 2.13.2.0 2681929 5203 83952 153994 1 188 20080703 39288832 3664 16776704 0 7534101 99.997 136527 40766 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 07:21:56] CVMFS is ok
[2025-12-14 07:21:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 07:21:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 07:21:56] Further information can be found at the LHC@home message board.
[2025-12-14 07:21:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 07:21:56] Checking for apptainer binary...
[2025-12-14 07:21:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 07:21:56] Running /usr/bin/apptainer --version
[2025-12-14 07:21:56] apptainer version 1.4.4-1.el9
[2025-12-14 07:21:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 07:21:57] c-210-16.aglt2.org
[2025-12-14 07:21:57] apptainer works
[2025-12-14 07:21:57] Set ATHENA_PROC_NUMBER=8
[2025-12-14 07:21:57] Set ATHENA_CORE_NUMBER=8
[2025-12-14 07:21:57] Starting ATLAS job with PandaID=6929309577
[2025-12-14 07:21:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 09:06:23]  *** The last 200 lines of the pilot log: ***
[2025-12-14 09:06:23] 2025-12-14 14:05:28,906 | INFO     | .. there are 5 such processes running
[2025-12-14 09:06:23] 2025-12-14 14:05:29,336 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 09:06:23] 2025-12-14 14:05:29,343 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.279225
[2025-12-14 09:06:23] 2025-12-14 14:05:29,349 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929309577/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,350 | INFO     | extracted standard info from prmon json
[2025-12-14 09:06:23] 2025-12-14 14:05:29,350 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 09:06:23] 2025-12-14 14:05:29,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 09:06:23] 2025-12-14 14:05:29,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 09:06:23] 2025-12-14 14:05:29,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 09:06:23] 2025-12-14 14:05:29,353 | INFO     | fitting pss+swap vs Time
[2025-12-14 09:06:23] 2025-12-14 14:05:29,354 | INFO     | sum of square deviations: 329031285.5
[2025-12-14 09:06:23] 2025-12-14 14:05:29,354 | INFO     | sum of deviations: 5163906047.500001
[2025-12-14 09:06:23] 2025-12-14 14:05:29,354 | INFO     | mean x: 1765718032.5
[2025-12-14 09:06:23] 2025-12-14 14:05:29,354 | INFO     | mean y: 2457328.4607843137
[2025-12-14 09:06:23] 2025-12-14 14:05:29,355 | INFO     | intersect: -27709199368.10752
[2025-12-14 09:06:23] 2025-12-14 14:05:29,355 | INFO     | chi2: 2.2669860252081713
[2025-12-14 09:06:23] 2025-12-14 14:05:29,355 | INFO     | sum of square deviations: 282974608.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,356 | INFO     | sum of deviations: 11548364449.999998
[2025-12-14 09:06:23] 2025-12-14 14:05:29,356 | INFO     | mean x: 1765717880.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,356 | INFO     | mean y: 2477579.6082474226
[2025-12-14 09:06:23] 2025-12-14 14:05:29,356 | INFO     | intersect: -72057534229.37132
[2025-12-14 09:06:23] 2025-12-14 14:05:29,356 | INFO     | chi2: 1.4887040287550792
[2025-12-14 09:06:23] 2025-12-14 14:05:29,357 | INFO     | current chi2=1.4887040287550792 (change=34.33113339909647 %)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,357 | INFO     | sum of square deviations: 241429643.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,357 | INFO     | sum of deviations: 11039306883.999998
[2025-12-14 09:06:23] 2025-12-14 14:05:29,358 | INFO     | mean x: 1765717727.5
[2025-12-14 09:06:23] 2025-12-14 14:05:29,358 | INFO     | mean y: 2475710.1304347827
[2025-12-14 09:06:23] 2025-12-14 14:05:29,358 | INFO     | intersect: -80734502658.31119
[2025-12-14 09:06:23] 2025-12-14 14:05:29,358 | INFO     | chi2: 1.4919437156653304
[2025-12-14 09:06:23] 2025-12-14 14:05:29,358 | INFO     | current chi2=1.4919437156653304 (change=-0.2176179312794825 %)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,358 | INFO     | right removable region: 91
[2025-12-14 09:06:23] 2025-12-14 14:05:29,359 | INFO     | sum of square deviations: 282974608.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,359 | INFO     | sum of deviations: -10372184898.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,359 | INFO     | mean x: 1765718185.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,359 | INFO     | mean y: 2507713.9587628865
[2025-12-14 09:06:23] 2025-12-14 14:05:29,359 | INFO     | intersect: 64723351827.933014
[2025-12-14 09:06:23] 2025-12-14 14:05:29,360 | INFO     | chi2: 0.8374829679813872
[2025-12-14 09:06:23] 2025-12-14 14:05:29,360 | INFO     | current chi2=0.8374829679813872 (change=63.05742696828123 %)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,360 | INFO     | sum of square deviations: 241429643.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,361 | INFO     | sum of deviations: -9888930972.5
[2025-12-14 09:06:23] 2025-12-14 14:05:29,361 | INFO     | mean x: 1765718337.5
[2025-12-14 09:06:23] 2025-12-14 14:05:29,361 | INFO     | mean y: 2505781.315217391
[2025-12-14 09:06:23] 2025-12-14 14:05:29,361 | INFO     | intersect: 72326129920.60518
[2025-12-14 09:06:23] 2025-12-14 14:05:29,361 | INFO     | chi2: 0.8265729507389803
[2025-12-14 09:06:23] 2025-12-14 14:05:29,361 | INFO     | current chi2=0.8265729507389803 (change=1.3027151189359345 %)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,362 | INFO     | left removable region: 20
[2025-12-14 09:06:23] 2025-12-14 14:05:29,362 | INFO     | sum of square deviations: 110960220.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,362 | INFO     | sum of deviations: -1395702875.0000002
[2025-12-14 09:06:23] 2025-12-14 14:05:29,362 | INFO     | mean x: 1765718307.0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,362 | INFO     | mean y: 2523137.943661972
[2025-12-14 09:06:23] 2025-12-14 14:05:29,363 | INFO     | intersect: 22212447717.401356
[2025-12-14 09:06:23] 2025-12-14 14:05:29,363 | INFO     | chi2: 0.0013213279135654795
[2025-12-14 09:06:23] 2025-12-14 14:05:29,363 | INFO     | current memory leak: -12.58 B/s (using 71 data points, chi2=0.00)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,363 | INFO     | could have reported an average CPU frequency of 2614 MHz (7 samples)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,363 | INFO     | ..............................
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . Timing measurements:
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . get job = 0 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . initial setup = 2 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . payload setup = 5 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . stage-in = 0 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . payload execution = 6172 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . stage-out = 0 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,364 | INFO     | . log creation = 0 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,365 | INFO     | ..............................
[2025-12-14 09:06:23] 2025-12-14 14:05:29,471 | INFO     | 
[2025-12-14 09:06:23] 2025-12-14 14:05:29,471 | INFO     | job summary report
[2025-12-14 09:06:23] 2025-12-14 14:05:29,471 | INFO     | --------------------------------------------------
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | PanDA job id: 6929309577
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | task id: 47886933
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | errors: (none)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | pilot state: finished 
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | transexitcode: 0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | exeerrorcode: 0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | exeerrordiag: 
[2025-12-14 09:06:23] 2025-12-14 14:05:29,472 | INFO     | exitcode: 0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | exitmsg: OK
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | cpuconsumptiontime: 46109 s
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | nevents: 400
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | neventsw: 0
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | pid: 1072030
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | pgrp: 1072030
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | corecount: 8
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | event service: False
[2025-12-14 09:06:23] 2025-12-14 14:05:29,473 | INFO     | sizes: {0: 2283964, 4: 2284226, 11: 2284254, 6182: 2311143, 6183: 2320197, 6187: 2320335}
[2025-12-14 09:06:23] 2025-12-14 14:05:29,474 | INFO     | --------------------------------------------------
[2025-12-14 09:06:23] 2025-12-14 14:05:29,474 | INFO     | 
[2025-12-14 09:06:23] 2025-12-14 14:05:29,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-14 09:06:23] 2025-12-14 14:05:29,490 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,493 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 09:06:23] 2025-12-14 14:05:29,493 | INFO     | job 6929309577 has completed (purged errors)
[2025-12-14 09:06:23] 2025-12-14 14:05:29,493 | INFO     | overall cleanup function is called
[2025-12-14 09:06:23] 2025-12-14 14:05:30,501 | INFO     | --- collectZombieJob: --- 10, [1072030]
[2025-12-14 09:06:23] 2025-12-14 14:05:30,501 | INFO     | zombie collector waiting for pid 1072030
[2025-12-14 09:06:23] 2025-12-14 14:05:30,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 09:06:23] 2025-12-14 14:05:30,502 | INFO     | collected zombie processes
[2025-12-14 09:06:23] 2025-12-14 14:05:30,502 | INFO     | will attempt to kill all subprocesses of pid=1072030
[2025-12-14 09:06:23] 2025-12-14 14:05:30,732 | INFO     | process IDs to be killed: [1072030] (in reverse order)
[2025-12-14 09:06:23] 2025-12-14 14:05:30,793 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 09:06:23] 2025-12-14 14:05:30,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 09:06:23] 2025-12-14 14:05:30,799 | INFO     | did not find any defunct processes belonging to 1072030
[2025-12-14 09:06:23] 2025-12-14 14:05:30,805 | INFO     | did not find any defunct processes belonging to 1072030
[2025-12-14 09:06:23] 2025-12-14 14:05:30,805 | INFO     | ready for new job
[2025-12-14 09:06:23] 2025-12-14 14:05:30,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 09:06:23] 2025-12-14 14:05:30,807 | INFO     | ***************************************
[2025-12-14 09:06:23] 2025-12-14 14:05:30,807 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 09:06:23] 2025-12-14 14:05:30,807 | INFO     | ***************************************
[2025-12-14 09:06:23] 2025-12-14 14:05:30,807 | INFO     | 
[2025-12-14 09:06:23] 2025-12-14 14:05:30,809 | INFO     | architecture information:
[2025-12-14 09:06:23] 2025-12-14 14:05:30,810 | INFO     | executing command: cat /etc/os-release
[2025-12-14 09:06:23] 2025-12-14 14:05:30,822 | INFO     | cat /etc/os-release:
[2025-12-14 09:06:23] NAME="CentOS Linux"
[2025-12-14 09:06:23] VERSION="7 (Core)"
[2025-12-14 09:06:23] ID="centos"
[2025-12-14 09:06:23] ID_LIKE="rhel fedora"
[2025-12-14 09:06:23] VERSION_ID="7"
[2025-12-14 09:06:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 09:06:23] ANSI_COLOR="0;31"
[2025-12-14 09:06:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 09:06:23] HOME_URL="https://www.centos.org/"
[2025-12-14 09:06:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 09:06:23] 
[2025-12-14 09:06:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 09:06:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 09:06:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 09:06:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 09:06:23] 
[2025-12-14 09:06:23] 2025-12-14 14:05:30,822 | INFO     | ***************************************
[2025-12-14 09:06:23] 2025-12-14 14:05:31,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-14 09:06:23] 2025-12-14 14:05:31,339 | INFO     | sufficient remaining disk space (51774488576 B)
[2025-12-14 09:06:23] 2025-12-14 14:05:31,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 09:06:23] 2025-12-14 14:05:31,340 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 09:06:23] 2025-12-14 14:05:31,340 | INFO     | update_server=False
[2025-12-14 09:06:23] 2025-12-14 14:05:31,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 09:06:23] 2025-12-14 14:05:31,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 09:06:23] 2025-12-14 14:05:31,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 09:06:23] 2025-12-14 14:05:31,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 09:06:23] 2025-12-14 14:05:31,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 09:06:23] 2025-12-14 14:05:31,341 | INFO     | aborting loop
[2025-12-14 09:06:23] 2025-12-14 14:05:31,373 | INFO     | all job control threads have been joined
[2025-12-14 09:06:23] 2025-12-14 14:05:31,423 | INFO     | all payload control threads have been joined
[2025-12-14 09:06:23] 2025-12-14 14:05:31,858 | INFO     | all data control threads have been joined
[2025-12-14 09:06:23] 2025-12-14 14:05:32,346 | INFO     | [job] retrieve thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,347 | INFO     | [job] queue monitor thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,347 | INFO     | [job] job monitor thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,379 | INFO     | [job] control thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,395 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,425 | INFO     | [payload] failed_post thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,428 | INFO     | [payload] control thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,480 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,688 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:32,864 | INFO     | [data] control thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:33,219 | INFO     | [payload] validate_post thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:33,341 | INFO     | [data] copytool_out thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:33,604 | INFO     | [job] validate thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:33,605 | INFO     | [data] copytool_in thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:35,345 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:05:41,466 | INFO     | job.realtimelogging is not enabled
[2025-12-14 09:06:23] 2025-12-14 14:05:42,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 09:06:23] 2025-12-14 14:06:01,245 | INFO     | PID=1064571 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 09:06:23] 2025-12-14 14:06:01,246 | INFO     | .. there are 5 such processes running
[2025-12-14 09:06:23] 2025-12-14 14:06:01,246 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 09:06:23] 2025-12-14 14:06:01,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 09:06:23] 2025-12-14 14:06:01,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 09:06:23] 2025-12-14 14:06:17,296 | INFO     | [monitor] cgroup control has ended
[2025-12-14 09:06:23] 2025-12-14 14:06:17,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046298388288)>', '<ExcThread(monitor, started 140045595965184)>']
[2025-12-14 09:06:23] 2025-12-14 14:06:18,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 09:06:23] 2025-12-14 14:06:18,327 | INFO     | [monitor] control thread has ended
[2025-12-14 09:06:23] 2025-12-14 14:06:22,866 | INFO     | all workflow threads have been joined
[2025-12-14 09:06:23] 2025-12-14 14:06:22,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 09:06:23] 2025-12-14 14:06:22,866 | INFO     | traces error code: 0
[2025-12-14 09:06:23] 2025-12-14 14:06:22,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 09:06:23] 2025-12-14 14:06:22,967 [wrapper] ==== pilot stdout END ====
[2025-12-14 09:06:23] 2025-12-14 14:06:22,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 09:06:23] 2025-12-14 14:06:22,973 [wrapper] pilotpid: 1064571
[2025-12-14 09:06:23] 2025-12-14 14:06:22,975 [wrapper] Pilot exit status: 0
[2025-12-14 09:06:23] 2025-12-14 14:06:22,985 [wrapper] pandaids: 6929309577
[2025-12-14 09:06:23] 2025-12-14 14:06:23,028 [wrapper] cleanup supervisor_pilot 1240109 1064572
[2025-12-14 09:06:23] 2025-12-14 14:06:23,031 [wrapper] Test setup, not cleaning
[2025-12-14 09:06:23] 2025-12-14 14:06:23,034 [wrapper] apfmon messages muted
[2025-12-14 09:06:23] 2025-12-14 14:06:23,036 [wrapper] ==== wrapper stdout END ====
[2025-12-14 09:06:23] 2025-12-14 14:06:23,039 [wrapper] ==== wrapper stderr END ====
[2025-12-14 09:06:23]  *** Error codes and diagnostics ***
[2025-12-14 09:06:23]     "exeErrorCode": 0,
[2025-12-14 09:06:23]     "exeErrorDiag": "",
[2025-12-14 09:06:23]     "pilotErrorCode": 0,
[2025-12-14 09:06:23]     "pilotErrorDiag": "",
[2025-12-14 09:06:23]  *** Listing of results directory ***
[2025-12-14 09:06:23] total 342068
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-14 09:06:23] -rwx------. 1 boincer umatlas     36322 Dec 13 08:46 runpilot2-wrapper.sh
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:47 queuedata.json
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas       100 Dec 14 07:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 09:06:23] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 07:21 run_atlas
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas       105 Dec 14 07:21 job.xml
[2025-12-14 09:06:23] -rw-r--r--. 2 boincer umatlas 193532692 Dec 14 07:21 EVNT.47886929._000088.pool.root.1
[2025-12-14 09:06:23] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 07:21 start_atlas.sh
[2025-12-14 09:06:23] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 07:21 shared
[2025-12-14 09:06:23] -rw-r--r--. 2 boincer umatlas    592395 Dec 14 07:21 input.tar.gz
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas         0 Dec 14 07:21 boinc_lockfile
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas      2513 Dec 14 07:21 pandaJob.out
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas        57 Dec 14 07:21 setup.sh.local
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas    991728 Dec 14 07:22 agis_schedconf.cvmfs.json
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas   1516240 Dec 14 07:22 agis_ddmendpoints.agis.ALL.json
[2025-12-14 09:06:23] drwx------. 5 boincer umatlas      4096 Dec 14 07:22 pilot3
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas      6663 Dec 14 09:00 init_data.xml
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas 150320078 Dec 14 09:04 HITS.47886933._002189.pool.root.1
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas       529 Dec 14 09:04 boinc_task_state.xml
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas      1035 Dec 14 09:05 memory_monitor_summary.json
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas    344614 Dec 14 09:05 log.47886933._002189.job.log.tgz.1
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas      7816 Dec 14 09:05 heartbeat.json
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas        95 Dec 14 09:06 pilot_heartbeat.json
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 09:06 boinc_mmap_file
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas        27 Dec 14 09:06 wrapper_checkpoint.txt
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas      4895 Dec 14 09:06 pilotlog.txt
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas    906078 Dec 14 09:06 log.47886933._002189.job.log.1
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas       357 Dec 14 09:06 output.list
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas       620 Dec 14 09:06 runtime_log
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas   1269760 Dec 14 09:06 result.tar.gz
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas      9342 Dec 14 09:06 runtime_log.err
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas       652 Dec 14 09:06 ou0LDmx7eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVYPKDmFKnk3m.diag
[2025-12-14 09:06:23] -rw-r--r--. 1 boincer umatlas     21013 Dec 14 09:06 stderr.txt
[2025-12-14 09:06:23] HITS file was successfully produced:
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas 150320078 Dec 14 09:04 shared/HITS.pool.root.1
[2025-12-14 09:06:23]  *** Contents of shared directory: ***
[2025-12-14 09:06:23] total 337640
[2025-12-14 09:06:23] -rw-r--r--. 2 boincer umatlas 193532692 Dec 14 07:21 ATLAS.root_0
[2025-12-14 09:06:23] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 07:21 start_atlas.sh
[2025-12-14 09:06:23] -rw-r--r--. 2 boincer umatlas    592395 Dec 14 07:21 input.tar.gz
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas 150320078 Dec 14 09:04 HITS.pool.root.1
[2025-12-14 09:06:23] -rw-------. 1 boincer umatlas   1269760 Dec 14 09:06 result.tar.gz
09:06:24 (1060885): run_atlas exited; CPU time 46250.600406
09:06:24 (1060885): called boinc_finish(0)

</stderr_txt>
]]>

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