Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:44:05 (779290): wrapper (7.7.26015): starting
20:44:05 (779290): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 20:44:05] Arguments: --nthreads 4
[2025-12-14 20:44:05] Threads: 4
[2025-12-14 20:44:05] Checking for CVMFS
[2025-12-14 20:44:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 20:44:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 20:44:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 20:44:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 20:44:06] 2.13.1.0 9815 1437 66652 154006 2 57 7449520 10240000 911 130560 0 1940889 99.993 52194 406 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-14 20:44:06] CVMFS is ok
[2025-12-14 20:44:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 20:44:06] Checking for apptainer binary...
[2025-12-14 20:44:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 20:44:06] Running /usr/bin/apptainer --version
[2025-12-14 20:44:06] apptainer version 1.4.5
[2025-12-14 20:44:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 20:44:06] atlas6l1
[2025-12-14 20:44:06] apptainer works
[2025-12-14 20:44:06] Set ATHENA_PROC_NUMBER=4
[2025-12-14 20:44:06] Set ATHENA_CORE_NUMBER=4
[2025-12-14 20:44:06] Starting ATLAS job with PandaID=6929309608
[2025-12-14 20:44:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:19:28]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:19:28]  protocol_id=None
[2025-12-14 22:19:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-14 22:19:28]  replicas=None
[2025-12-14 22:19:28]  scope=mc23_13p6TeV
[2025-12-14 22:19:28]  status=None
[2025-12-14 22:19:28]  status_code=0
[2025-12-14 22:19:28]  storage_token=
[2025-12-14 22:19:28]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6929309608/log.47886933._002220.job.log.tgz.1
[2025-12-14 22:19:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/26/log.47886933._002220.job.log.tgz.1
[2025-12-14 22:19:28]  workdir=None
[2025-12-14 22:19:28] ]
[2025-12-14 22:19:28] 2025-12-14 21:18:50,239 | INFO     | transferring file log.47886933._002220.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6929309608/log.47886933._002220.job.log.tgz.1 to /var/li
[2025-12-14 22:19:28] 2025-12-14 21:18:50,239 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6929309608/log.47886933._002220.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-14 22:19:28] 2025-12-14 21:18:50,256 | INFO     | adding to output.list: log.47886933._002220.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/26/log.47886933._002220.job.log.tg
[2025-12-14 22:19:28] 2025-12-14 21:18:50,257 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 22:19:28] 2025-12-14 21:18:50,258 | INFO     | summary of transferred files:
[2025-12-14 22:19:28] 2025-12-14 21:18:50,258 | INFO     |  -- lfn=log.47886933._002220.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 22:19:28] 2025-12-14 21:18:50,258 | INFO     | stage-out finished correctly
[2025-12-14 22:19:28] 2025-12-14 21:18:50,280 | INFO     | time since job start (5676s) is within the limit (174528.0s)
[2025-12-14 22:19:28] 2025-12-14 21:18:50,509 | INFO     | monitor loop #433: job 0:6929309608 is in state 'finished'
[2025-12-14 22:19:28] 2025-12-14 21:18:50,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:19:28] 2025-12-14 21:18:50,557 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 22:19:28] 2025-12-14 21:18:51,939 | INFO     | job 6929309608 has state=finished
[2025-12-14 22:19:28] 2025-12-14 21:18:51,940 | INFO     | preparing for final server update for job 6929309608 in state='finished'
[2025-12-14 22:19:28] 2025-12-14 21:18:51,941 | INFO     | this job has now completed (state=finished)
[2025-12-14 22:19:28] 2025-12-14 21:18:51,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 22:19:28] 2025-12-14 21:18:51,941 | INFO     | log transfer has been attempted: DONE
[2025-12-14 22:19:28] 2025-12-14 21:18:51,941 | INFO     | job 6929309608 has finished - writing final server update
[2025-12-14 22:19:28] 2025-12-14 21:18:51,942 | INFO     | total number of processed events: 400 (read)
[2025-12-14 22:19:28] 2025-12-14 21:18:51,943 | INFO     | executing command: lscpu
[2025-12-14 22:19:28] 2025-12-14 21:18:51,962 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 22:19:28] 2025-12-14 21:18:52,297 | INFO     | time since job start (5678s) is within the limit (174528.0s)
[2025-12-14 22:19:28] 2025-12-14 21:18:53,012 | INFO     | monitor loop #434: job 0:6929309608 is in state 'finished'
[2025-12-14 22:19:28] 2025-12-14 21:18:53,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:19:28] 2025-12-14 21:18:54,304 | INFO     | time since job start (5680s) is within the limit (174528.0s)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,254 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 22:19:28] 2025-12-14 21:18:55,255 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-14 22:19:28] 2025-12-14 21:18:55,256 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6929309608/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,257 | INFO     | extracted standard info from prmon json
[2025-12-14 22:19:28] 2025-12-14 21:18:55,257 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 22:19:28] 2025-12-14 21:18:55,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:19:28] 2025-12-14 21:18:55,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 22:19:28] 2025-12-14 21:18:55,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 22:19:28] 2025-12-14 21:18:55,258 | INFO     | fitting pss+swap vs Time
[2025-12-14 22:19:28] 2025-12-14 21:18:55,258 | INFO     | sum of square deviations: 197203697.5
[2025-12-14 22:19:28] 2025-12-14 21:18:55,258 | INFO     | sum of deviations: -18418509793.499996
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | mean x: 1765744372.5
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | mean y: 2433687.802325581
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | intersect: 164920132645.79858
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | chi2: 0.18823224189169344
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | current memory leak: -93.40 B/s (using 86 data points, chi2=0.19)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | ..............................
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . Timing measurements:
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . get job = 0 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . initial setup = 2 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . payload setup = 3 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . stage-in = 0 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . payload execution = 5654 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . stage-out = 0 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | . log creation = 0 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,259 | INFO     | ..............................
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | 
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | job summary report
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | --------------------------------------------------
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | PanDA job id: 6929309608
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | task id: 47886933
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | errors: (none)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | pilot state: finished 
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | transexitcode: 0
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | exeerrorcode: 0
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | exeerrordiag: 
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | exitcode: 0
[2025-12-14 22:19:28] 2025-12-14 21:18:55,613 | INFO     | exitmsg: OK
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | cpuconsumptiontime: 21297 s
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | nevents: 400
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | neventsw: 0
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | pid: 789639
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | pgrp: 789639
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | corecount: 4
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | event service: False
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | sizes: {0: 2283978, 2: 2284240, 11: 2284268, 5661: 2320029, 5662: 2320029, 5666: 2320223}
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | --------------------------------------------------
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | 
[2025-12-14 22:19:28] 2025-12-14 21:18:55,614 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-14 22:19:28] 2025-12-14 21:18:55,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 22:19:28] 2025-12-14 21:18:55,631 | INFO     | job 6929309608 has completed (purged errors)
[2025-12-14 22:19:28] 2025-12-14 21:18:55,631 | INFO     | overall cleanup function is called
[2025-12-14 22:19:28] 2025-12-14 21:18:56,638 | INFO     | --- collectZombieJob: --- 10, [789639]
[2025-12-14 22:19:28] 2025-12-14 21:18:56,638 | INFO     | zombie collector waiting for pid 789639
[2025-12-14 22:19:28] 2025-12-14 21:18:56,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 22:19:28] 2025-12-14 21:18:56,638 | INFO     | collected zombie processes
[2025-12-14 22:19:28] 2025-12-14 21:18:56,638 | INFO     | will attempt to kill all subprocesses of pid=789639
[2025-12-14 22:19:28] 2025-12-14 21:18:56,720 | INFO     | process IDs to be killed: [789639] (in reverse order)
[2025-12-14 22:19:28] 2025-12-14 21:18:56,749 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 22:19:28] 2025-12-14 21:18:56,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 22:19:28] 2025-12-14 21:18:56,751 | INFO     | did not find any defunct processes belonging to 789639
[2025-12-14 22:19:28] 2025-12-14 21:18:56,753 | INFO     | did not find any defunct processes belonging to 789639
[2025-12-14 22:19:28] 2025-12-14 21:18:56,753 | INFO     | ready for new job
[2025-12-14 22:19:28] 2025-12-14 21:18:56,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 22:19:28] 2025-12-14 21:18:56,754 | INFO     | ***************************************
[2025-12-14 22:19:28] 2025-12-14 21:18:56,754 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 22:19:28] 2025-12-14 21:18:56,755 | INFO     | ***************************************
[2025-12-14 22:19:28] 2025-12-14 21:18:56,755 | INFO     | 
[2025-12-14 22:19:28] 2025-12-14 21:18:56,755 | INFO     | pilot is running in a VM
[2025-12-14 22:19:28] 2025-12-14 21:18:56,755 | INFO     | architecture information:
[2025-12-14 22:19:28] 2025-12-14 21:18:56,755 | INFO     | executing command: cat /etc/os-release
[2025-12-14 22:19:28] 2025-12-14 21:18:56,767 | INFO     | cat /etc/os-release:
[2025-12-14 22:19:28] NAME="CentOS Linux"
[2025-12-14 22:19:28] VERSION="7 (Core)"
[2025-12-14 22:19:28] ID="centos"
[2025-12-14 22:19:28] ID_LIKE="rhel fedora"
[2025-12-14 22:19:28] VERSION_ID="7"
[2025-12-14 22:19:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 22:19:28] ANSI_COLOR="0;31"
[2025-12-14 22:19:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 22:19:28] HOME_URL="https://www.centos.org/"
[2025-12-14 22:19:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 22:19:28] 
[2025-12-14 22:19:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 22:19:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 22:19:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 22:19:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 22:19:28] 
[2025-12-14 22:19:28] 2025-12-14 21:18:56,768 | INFO     | ***************************************
[2025-12-14 22:19:28] 2025-12-14 21:18:57,271 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-14 22:19:28] 2025-12-14 21:18:57,281 | INFO     | sufficient remaining disk space (160177324032 B)
[2025-12-14 22:19:28] 2025-12-14 21:18:57,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 22:19:28] 2025-12-14 21:18:57,281 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 22:19:28] 2025-12-14 21:18:57,281 | INFO     | update_server=False
[2025-12-14 22:19:28] 2025-12-14 21:18:57,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 22:19:28] 2025-12-14 21:18:57,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:19:28] 2025-12-14 21:18:57,282 | INFO     | aborting loop
[2025-12-14 22:19:28] 2025-12-14 21:18:57,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:19:28] 2025-12-14 21:18:57,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 22:19:28] 2025-12-14 21:18:57,664 | INFO     | all data control threads have been joined
[2025-12-14 22:19:28] 2025-12-14 21:18:57,777 | INFO     | all payload control threads have been joined
[2025-12-14 22:19:28] 2025-12-14 21:18:58,287 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,287 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,287 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:19:28] 2025-12-14 21:18:58,462 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,523 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,665 | INFO     | [data] control thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,783 | INFO     | [payload] control thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,816 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:58,942 | INFO     | all job control threads have been joined
[2025-12-14 22:19:28] 2025-12-14 21:18:59,209 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:59,380 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:59,665 | INFO     | [job] validate thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:59,752 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:18:59,947 | INFO     | [job] control thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:19:00,327 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:19:01,289 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:19:07,578 | INFO     | job.realtimelogging is not enabled
[2025-12-14 22:19:28] 2025-12-14 21:19:08,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:19:28] 2025-12-14 21:19:22,422 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:19:28] 2025-12-14 21:19:22,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131224208811840)>', '<ExcThread(monitor, started 131223548565248)>']
[2025-12-14 22:19:28] 2025-12-14 21:19:26,391 | INFO     | 5684s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-14 22:19:28] 2025-12-14 21:19:27,493 | INFO     | PID=783095 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 22:19:28] 2025-12-14 21:19:27,494 | INFO     | .. there are 2 such processes running
[2025-12-14 22:19:28] 2025-12-14 21:19:27,494 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:19:28] 2025-12-14 21:19:27,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:19:28] 2025-12-14 21:19:27,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:19:28] 2025-12-14 21:19:27,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:19:28] 2025-12-14 21:19:27,494 | INFO     | [monitor] control thread has ended
[2025-12-14 22:19:28] 2025-12-14 21:19:27,797 | INFO     | all workflow threads have been joined
[2025-12-14 22:19:28] 2025-12-14 21:19:27,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:19:28] 2025-12-14 21:19:27,798 | INFO     | traces error code: 0
[2025-12-14 22:19:28] 2025-12-14 21:19:27,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:19:28] 2025-12-14 21:19:27,884 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:19:28] 2025-12-14 21:19:27,888 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:19:28] 2025-12-14 21:19:27,891 [wrapper] pilotpid: 783095
[2025-12-14 22:19:28] 2025-12-14 21:19:27,894 [wrapper] Pilot exit status: 0
[2025-12-14 22:19:28] 2025-12-14 21:19:27,909 [wrapper] pandaids: 6929309608
[2025-12-14 22:19:28] 2025-12-14 21:19:27,933 [wrapper] cleanup supervisor_pilot  830376 783096
[2025-12-14 22:19:28] 2025-12-14 21:19:27,937 [wrapper] Test setup, not cleaning
[2025-12-14 22:19:28] 2025-12-14 21:19:27,940 [wrapper] apfmon messages muted
[2025-12-14 22:19:28] 2025-12-14 21:19:27,943 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:19:28] 2025-12-14 21:19:27,946 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:19:28]  *** Error codes and diagnostics ***
[2025-12-14 22:19:28]     "exeErrorCode": 0,
[2025-12-14 22:19:28]     "exeErrorDiag": "",
[2025-12-14 22:19:28]     "pilotErrorCode": 0,
[2025-12-14 22:19:28]     "pilotErrorDiag": "",
[2025-12-14 22:19:28]  *** Listing of results directory ***
[2025-12-14 22:19:28] insgesamt 336260
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc    579449 Dez 13 14:45 pilot3.tar.gz
[2025-12-14 22:19:28] -rwx------ 1 yeti boinc     36322 Dez 13 14:46 runpilot2-wrapper.sh
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc      5112 Dez 13 14:47 queuedata.json
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc       100 Dez 14 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:19:28] -rwxr-xr-x 1 yeti boinc      7986 Dez 14 20:44 run_atlas
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc       105 Dez 14 20:44 job.xml
[2025-12-14 22:19:28] -rw-r--r-- 2 yeti boinc     15847 Dez 14 20:44 start_atlas.sh
[2025-12-14 22:19:28] drwxrwx--x 2 yeti boinc      4096 Dez 14 20:44 shared
[2025-12-14 22:19:28] -rw-r--r-- 2 yeti boinc    592394 Dez 14 20:44 input.tar.gz
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc      6594 Dez 14 20:44 init_data.xml
[2025-12-14 22:19:28] -rw-r--r-- 2 yeti boinc 191912950 Dez 14 20:44 EVNT.47886929._000089.pool.root.1
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc         0 Dez 14 20:44 boinc_setup_complete
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc         0 Dez 14 20:44 boinc_lockfile
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc      2513 Dez 14 20:44 pandaJob.out
[2025-12-14 22:19:28] -rw------- 1 yeti boinc    991016 Dez 14 20:44 agis_schedconf.cvmfs.json
[2025-12-14 22:19:28] -rw------- 1 yeti boinc   1516240 Dez 14 20:44 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:19:28] drwx------ 5 yeti boinc      4096 Dez 14 20:44 pilot3
[2025-12-14 22:19:28] -rw------- 1 yeti boinc 146233622 Dez 14 22:18 HITS.47886933._002220.pool.root.1
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc       529 Dez 14 22:18 boinc_task_state.xml
[2025-12-14 22:19:28] -rw------- 1 yeti boinc      1024 Dez 14 22:18 memory_monitor_summary.json
[2025-12-14 22:19:28] -rw------- 1 yeti boinc    282812 Dez 14 22:18 log.47886933._002220.job.log.tgz.1
[2025-12-14 22:19:28] -rw------- 1 yeti boinc        95 Dez 14 22:18 pilot_heartbeat.json
[2025-12-14 22:19:28] -rw------- 1 yeti boinc      7770 Dez 14 22:18 heartbeat.json
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc        27 Dez 14 22:19 wrapper_checkpoint.txt
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc      8192 Dez 14 22:19 boinc_mmap_file
[2025-12-14 22:19:28] -rw------- 1 yeti boinc      5086 Dez 14 22:19 pilotlog.txt
[2025-12-14 22:19:28] -rw------- 1 yeti boinc    850848 Dez 14 22:19 log.47886933._002220.job.log.1
[2025-12-14 22:19:28] -rw------- 1 yeti boinc       357 Dez 14 22:19 output.list
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc       620 Dez 14 22:19 runtime_log
[2025-12-14 22:19:28] -rw------- 1 yeti boinc   1157120 Dez 14 22:19 result.tar.gz
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc      9017 Dez 14 22:19 runtime_log.err
[2025-12-14 22:19:28] -rw------- 1 yeti boinc       639 Dez 14 22:19 FxLMDmx7eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkYPKDmn7mben.diag
[2025-12-14 22:19:28] -rw-r--r-- 1 yeti boinc     21498 Dez 14 22:19 stderr.txt
[2025-12-14 22:19:28] HITS file was successfully produced:
[2025-12-14 22:19:28] -rw------- 1 yeti boinc 146233622 Dez 14 22:18 shared/HITS.pool.root.1
[2025-12-14 22:19:28]  *** Contents of shared directory: ***
[2025-12-14 22:19:28] insgesamt 331956
[2025-12-14 22:19:28] -rw-r--r-- 2 yeti boinc     15847 Dez 14 20:44 start_atlas.sh
[2025-12-14 22:19:28] -rw-r--r-- 2 yeti boinc    592394 Dez 14 20:44 input.tar.gz
[2025-12-14 22:19:28] -rw-r--r-- 2 yeti boinc 191912950 Dez 14 20:44 ATLAS.root_0
[2025-12-14 22:19:28] -rw------- 1 yeti boinc 146233622 Dez 14 22:18 HITS.pool.root.1
[2025-12-14 22:19:28] -rw------- 1 yeti boinc   1157120 Dez 14 22:19 result.tar.gz
22:19:29 (779290): run_atlas exited; CPU time 21367.657742
22:19:29 (779290): called boinc_finish(0)

</stderr_txt>
]]>

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