Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:21:53 (5772): wrapper (7.7.26015): starting
07:21:53 (5772): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 07:21:53] Arguments: --nthreads 12
[2025-12-14 07:21:53] Threads: 12
[2025-12-14 07:21:53] Checking for CVMFS
[2025-12-14 07:21:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 07:21:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 07:21:53] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 07:21:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 07:21:53] 2.11.2.0 2991 313549 96352 153994 2 59 17315577 20275200 1 130560 1 138667944 99.959 19103341 15418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 07:21:53] CVMFS is ok
[2025-12-14 07:21:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 07:21:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 07:21:53] Further information can be found at the LHC@home message board.
[2025-12-14 07:21:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 07:21:53] Checking for apptainer binary...
[2025-12-14 07:21:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 07:21:53] Running /usr/bin/apptainer --version
[2025-12-14 07:21:53] apptainer version 1.3.2-1.el7
[2025-12-14 07:21:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 07:21:55] c-205-32.aglt2.org
[2025-12-14 07:21:55] apptainer works
[2025-12-14 07:21:55] Set ATHENA_PROC_NUMBER=12
[2025-12-14 07:21:55] Set ATHENA_CORE_NUMBER=12
[2025-12-14 07:21:55] Starting ATLAS job with PandaID=6929719275
[2025-12-14 07:21:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 08:34:21]  *** The last 200 lines of the pilot log: ***
[2025-12-14 08:34:21]  status_code=0
[2025-12-14 08:34:21]  storage_token=
[2025-12-14 08:34:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929719275/log.47899042._002231.job.log.tgz.1
[2025-12-14 08:34:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/e9/log.47899042._002231.job.log.tgz.1
[2025-12-14 08:34:21]  workdir=None
[2025-12-14 08:34:21] ]
[2025-12-14 08:34:21] 2025-12-14 13:33:42,584 | INFO     | transferring file log.47899042._002231.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929719275/log.47899042._002231.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 08:34:21] 2025-12-14 13:33:42,584 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929719275/log.47899042._002231.job.log.tgz.1 /tmp/boinchome/slots/0/log.47899042._002231.job
[2025-12-14 08:34:21] 2025-12-14 13:33:42,605 | INFO     | adding to output.list: log.47899042._002231.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/e9/log.47899042._002231.job.log.tg
[2025-12-14 08:34:21] 2025-12-14 13:33:42,606 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 08:34:21] 2025-12-14 13:33:42,607 | INFO     | summary of transferred files:
[2025-12-14 08:34:21] 2025-12-14 13:33:42,607 | INFO     |  -- lfn=log.47899042._002231.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 08:34:21] 2025-12-14 13:33:42,607 | INFO     | stage-out finished correctly
[2025-12-14 08:34:21] 2025-12-14 13:33:43,270 | INFO     | time since job start (4294s) is within the limit (174528.0s)
[2025-12-14 08:34:21] 2025-12-14 13:33:44,385 | INFO     | monitor loop #320: job 0:6929719275 is in state 'finished'
[2025-12-14 08:34:21] 2025-12-14 13:33:44,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:34:21] 2025-12-14 13:33:44,823 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 08:34:21] 2025-12-14 13:33:45,275 | INFO     | time since job start (4296s) is within the limit (174528.0s)
[2025-12-14 08:34:21] 2025-12-14 13:33:46,889 | INFO     | monitor loop #321: job 0:6929719275 is in state 'finished'
[2025-12-14 08:34:21] 2025-12-14 13:33:46,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:34:21] 2025-12-14 13:33:47,281 | INFO     | time since job start (4298s) is within the limit (174528.0s)
[2025-12-14 08:34:21] 2025-12-14 13:33:47,662 | INFO     | job 6929719275 has state=finished
[2025-12-14 08:34:21] 2025-12-14 13:33:47,662 | INFO     | preparing for final server update for job 6929719275 in state='finished'
[2025-12-14 08:34:21] 2025-12-14 13:33:47,663 | INFO     | this job has now completed (state=finished)
[2025-12-14 08:34:21] 2025-12-14 13:33:47,663 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 08:34:21] 2025-12-14 13:33:47,663 | INFO     | log transfer has been attempted: DONE
[2025-12-14 08:34:21] 2025-12-14 13:33:47,663 | INFO     | job 6929719275 has finished - writing final server update
[2025-12-14 08:34:21] 2025-12-14 13:33:47,664 | INFO     | total number of processed events: 400 (read)
[2025-12-14 08:34:21] 2025-12-14 13:33:47,665 | INFO     | executing command: lscpu
[2025-12-14 08:34:21] 2025-12-14 13:33:47,691 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 08:34:21] 2025-12-14 13:33:49,287 | INFO     | time since job start (4300s) is within the limit (174528.0s)
[2025-12-14 08:34:21] 2025-12-14 13:33:49,392 | INFO     | monitor loop #322: job 0:6929719275 is in state 'finished'
[2025-12-14 08:34:21] 2025-12-14 13:33:49,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:34:21] 2025-12-14 13:33:51,292 | INFO     | time since job start (4302s) is within the limit (174528.0s)
[2025-12-14 08:34:21] 2025-12-14 13:33:51,895 | INFO     | monitor loop #323: job 0:6929719275 is in state 'finished'
[2025-12-14 08:34:21] 2025-12-14 13:33:51,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:34:21] 2025-12-14 13:33:52,412 | INFO     | PID=9494 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 08:34:21] 2025-12-14 13:33:53,307 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 08:34:21] 2025-12-14 13:33:53,311 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-12-14 08:34:21] 2025-12-14 13:33:53,313 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929719275/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,314 | INFO     | extracted standard info from prmon json
[2025-12-14 08:34:21] 2025-12-14 13:33:53,314 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 08:34:21] 2025-12-14 13:33:53,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 08:34:21] 2025-12-14 13:33:53,315 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 08:34:21] 2025-12-14 13:33:53,315 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 08:34:21] 2025-12-14 13:33:53,317 | INFO     | fitting pss+swap vs Time
[2025-12-14 08:34:21] 2025-12-14 13:33:53,318 | INFO     | sum of square deviations: 77515872.0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,318 | INFO     | sum of deviations: 255808562.99999988
[2025-12-14 08:34:21] 2025-12-14 13:33:53,318 | INFO     | mean x: 1765717153.0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,318 | INFO     | mean y: 2724931.492063492
[2025-12-14 08:34:21] 2025-12-14 13:33:53,318 | INFO     | intersect: -5824282569.286369
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | chi2: 0.048481468150284396
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | current memory leak: 3.30 B/s (using 63 data points, chi2=0.05)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | ..............................
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | . Timing measurements:
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | . get job = 0 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,319 | INFO     | . initial setup = 2 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,320 | INFO     | . payload setup = 6 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,320 | INFO     | . stage-in = 0 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,320 | INFO     | . payload execution = 4265 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,320 | INFO     | . stage-out = 0 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,320 | INFO     | . log creation = 0 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,320 | INFO     | ..............................
[2025-12-14 08:34:21] 2025-12-14 13:33:53,399 | INFO     | 
[2025-12-14 08:34:21] 2025-12-14 13:33:53,399 | INFO     | job summary report
[2025-12-14 08:34:21] 2025-12-14 13:33:53,399 | INFO     | --------------------------------------------------
[2025-12-14 08:34:21] 2025-12-14 13:33:53,399 | INFO     | PanDA job id: 6929719275
[2025-12-14 08:34:21] 2025-12-14 13:33:53,399 | INFO     | task id: 47899042
[2025-12-14 08:34:21] 2025-12-14 13:33:53,400 | INFO     | errors: (none)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 08:34:21] 2025-12-14 13:33:53,400 | INFO     | pilot state: finished 
[2025-12-14 08:34:21] 2025-12-14 13:33:53,400 | INFO     | transexitcode: 0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,400 | INFO     | exeerrorcode: 0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,400 | INFO     | exeerrordiag: 
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | exitcode: 0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | exitmsg: OK
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | cpuconsumptiontime: 45272 s
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | nevents: 400
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | neventsw: 0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | pid: 15873
[2025-12-14 08:34:21] 2025-12-14 13:33:53,401 | INFO     | pgrp: 15873
[2025-12-14 08:34:21] 2025-12-14 13:33:53,402 | INFO     | corecount: 12
[2025-12-14 08:34:21] 2025-12-14 13:33:53,402 | INFO     | event service: False
[2025-12-14 08:34:21] 2025-12-14 13:33:53,402 | INFO     | sizes: {0: 2283934, 5: 2284196, 11: 2284252, 4276: 2310259, 4277: 2310258, 4278: 2319312, 4280: 2319496, 4288: 2319690}
[2025-12-14 08:34:21] 2025-12-14 13:33:53,402 | INFO     | --------------------------------------------------
[2025-12-14 08:34:21] 2025-12-14 13:33:53,402 | INFO     | 
[2025-12-14 08:34:21] 2025-12-14 13:33:53,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 08:34:21] 2025-12-14 13:33:53,412 | INFO     | time since job start (4304s) is within the limit (174528.0s)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 08:34:21] 2025-12-14 13:33:53,429 | INFO     | job 6929719275 has completed (purged errors)
[2025-12-14 08:34:21] 2025-12-14 13:33:53,429 | INFO     | overall cleanup function is called
[2025-12-14 08:34:21] 2025-12-14 13:33:54,437 | INFO     | --- collectZombieJob: --- 10, [15873]
[2025-12-14 08:34:21] 2025-12-14 13:33:54,437 | INFO     | zombie collector waiting for pid 15873
[2025-12-14 08:34:21] 2025-12-14 13:33:54,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 08:34:21] 2025-12-14 13:33:54,437 | INFO     | collected zombie processes
[2025-12-14 08:34:21] 2025-12-14 13:33:54,437 | INFO     | will attempt to kill all subprocesses of pid=15873
[2025-12-14 08:34:21] 2025-12-14 13:33:54,530 | INFO     | process IDs to be killed: [15873] (in reverse order)
[2025-12-14 08:34:21] 2025-12-14 13:33:54,582 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 08:34:21] 2025-12-14 13:33:54,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 08:34:21] 2025-12-14 13:33:54,586 | INFO     | did not find any defunct processes belonging to 15873
[2025-12-14 08:34:21] 2025-12-14 13:33:54,589 | INFO     | did not find any defunct processes belonging to 15873
[2025-12-14 08:34:21] 2025-12-14 13:33:54,589 | INFO     | ready for new job
[2025-12-14 08:34:21] 2025-12-14 13:33:54,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 08:34:21] 2025-12-14 13:33:54,590 | INFO     | ***************************************
[2025-12-14 08:34:21] 2025-12-14 13:33:54,591 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 08:34:21] 2025-12-14 13:33:54,591 | INFO     | ***************************************
[2025-12-14 08:34:21] 2025-12-14 13:33:54,591 | INFO     | 
[2025-12-14 08:34:21] 2025-12-14 13:33:54,591 | INFO     | architecture information:
[2025-12-14 08:34:21] 2025-12-14 13:33:54,592 | INFO     | executing command: cat /etc/os-release
[2025-12-14 08:34:21] 2025-12-14 13:33:54,605 | INFO     | cat /etc/os-release:
[2025-12-14 08:34:21] NAME="CentOS Linux"
[2025-12-14 08:34:21] VERSION="7 (Core)"
[2025-12-14 08:34:21] ID="centos"
[2025-12-14 08:34:21] ID_LIKE="rhel fedora"
[2025-12-14 08:34:21] VERSION_ID="7"
[2025-12-14 08:34:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 08:34:21] ANSI_COLOR="0;31"
[2025-12-14 08:34:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 08:34:21] HOME_URL="https://www.centos.org/"
[2025-12-14 08:34:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 08:34:21] 
[2025-12-14 08:34:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 08:34:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 08:34:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 08:34:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 08:34:21] 
[2025-12-14 08:34:21] 2025-12-14 13:33:54,605 | INFO     | ***************************************
[2025-12-14 08:34:21] 2025-12-14 13:33:55,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 08:34:21] 2025-12-14 13:33:55,124 | INFO     | sufficient remaining disk space (29413605376 B)
[2025-12-14 08:34:21] 2025-12-14 13:33:55,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 08:34:21] 2025-12-14 13:33:55,125 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 08:34:21] 2025-12-14 13:33:55,125 | INFO     | update_server=False
[2025-12-14 08:34:21] 2025-12-14 13:33:55,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 08:34:21] 2025-12-14 13:33:55,125 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-14 08:34:21] 2025-12-14 13:33:55,126 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 08:34:21] 2025-12-14 13:33:55,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 08:34:21] 2025-12-14 13:33:55,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 08:34:21] 2025-12-14 13:33:55,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 08:34:21] 2025-12-14 13:33:55,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 08:34:21] 2025-12-14 13:33:55,403 | INFO     | aborting loop
[2025-12-14 08:34:21] 2025-12-14 13:33:55,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 08:34:21] 2025-12-14 13:33:55,515 | INFO     | all data control threads have been joined
[2025-12-14 08:34:21] 2025-12-14 13:33:55,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 08:34:21] 2025-12-14 13:33:55,908 | INFO     | all job control threads have been joined
[2025-12-14 08:34:21] 2025-12-14 13:33:56,130 | INFO     | [job] queue monitor thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,130 | INFO     | [job] retrieve thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,307 | INFO     | [payload] failed_post thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,409 | INFO     | [job] job monitor thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,520 | INFO     | [data] control thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,538 | INFO     | all payload control threads have been joined
[2025-12-14 08:34:21] 2025-12-14 13:33:56,661 | INFO     | [job] validate thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,870 | INFO     | [payload] validate_post thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,912 | INFO     | [job] control thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:56,916 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:57,179 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:57,360 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:57,468 | INFO     | [data] copytool_in thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:57,543 | INFO     | [payload] control thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:57,709 | INFO     | [data] copytool_out thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:33:59,418 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:34:05,644 | INFO     | job.realtimelogging is not enabled
[2025-12-14 08:34:21] 2025-12-14 13:34:06,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 08:34:21] 2025-12-14 13:34:15,716 | INFO     | [monitor] cgroup control has ended
[2025-12-14 08:34:21] 2025-12-14 13:34:16,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352452159296)>', '<ExcThread(monitor, started 140352225171200)>']
[2025-12-14 08:34:21] 2025-12-14 13:34:17,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 08:34:21] 2025-12-14 13:34:17,210 | INFO     | [monitor] control thread has ended
[2025-12-14 08:34:21] 2025-12-14 13:34:21,655 | INFO     | all workflow threads have been joined
[2025-12-14 08:34:21] 2025-12-14 13:34:21,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 08:34:21] 2025-12-14 13:34:21,655 | INFO     | traces error code: 0
[2025-12-14 08:34:21] 2025-12-14 13:34:21,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 08:34:21] 2025-12-14 13:34:21,750 [wrapper] ==== pilot stdout END ====
[2025-12-14 08:34:21] 2025-12-14 13:34:21,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 08:34:21] 2025-12-14 13:34:21,757 [wrapper] pilotpid: 9494
[2025-12-14 08:34:21] 2025-12-14 13:34:21,761 [wrapper] Pilot exit status: 0
[2025-12-14 08:34:21] 2025-12-14 13:34:21,775 [wrapper] pandaids: 6929719275
[2025-12-14 08:34:21] 2025-12-14 13:34:21,814 [wrapper] cleanup supervisor_pilot  6179 9495
[2025-12-14 08:34:21] 2025-12-14 13:34:21,818 [wrapper] Test setup, not cleaning
[2025-12-14 08:34:21] 2025-12-14 13:34:21,821 [wrapper] apfmon messages muted
[2025-12-14 08:34:21] 2025-12-14 13:34:21,825 [wrapper] ==== wrapper stdout END ====
[2025-12-14 08:34:21] 2025-12-14 13:34:21,828 [wrapper] ==== wrapper stderr END ====
[2025-12-14 08:34:21]  *** Error codes and diagnostics ***
[2025-12-14 08:34:21]     "exeErrorCode": 0,
[2025-12-14 08:34:21]     "exeErrorDiag": "",
[2025-12-14 08:34:21]     "pilotErrorCode": 0,
[2025-12-14 08:34:21]     "pilotErrorDiag": "",
[2025-12-14 08:34:21]  *** Listing of results directory ***
[2025-12-14 08:34:21] total 373676
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-14 08:34:21] -rwx------ 1 boincer umatlas     36322 Dec 13 16:22 runpilot2-wrapper.sh
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 16:25 queuedata.json
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas       100 Dec 14 07:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 08:34:21] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 07:21 run_atlas
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas       105 Dec 14 07:21 job.xml
[2025-12-14 08:34:21] -rw-r--r-- 2 boincer umatlas 197165612 Dec 14 07:21 EVNT.47899040._000110.pool.root.1
[2025-12-14 08:34:21] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 07:21 start_atlas.sh
[2025-12-14 08:34:21] drwxrwx--x 2 boincer umatlas      4096 Dec 14 07:21 shared
[2025-12-14 08:34:21] -rw-r--r-- 2 boincer umatlas    592390 Dec 14 07:21 input.tar.gz
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas         0 Dec 14 07:21 boinc_lockfile
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas      2491 Dec 14 07:21 pandaJob.out
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas        57 Dec 14 07:21 setup.sh.local
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas    991728 Dec 14 07:22 agis_schedconf.cvmfs.json
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas   1516240 Dec 14 07:22 agis_ddmendpoints.agis.ALL.json
[2025-12-14 08:34:21] drwx------ 5 boincer umatlas      4096 Dec 14 07:22 pilot3
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas      5952 Dec 14 08:30 init_data.xml
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas        95 Dec 14 08:33 pilot_heartbeat.json
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas 179549532 Dec 14 08:33 HITS.47899042._002231.pool.root.1
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas       529 Dec 14 08:33 boinc_task_state.xml
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas      1043 Dec 14 08:33 memory_monitor_summary.json
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas    373737 Dec 14 08:33 log.47899042._002231.job.log.tgz.1
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas      7838 Dec 14 08:33 heartbeat.json
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas        27 Dec 14 08:34 wrapper_checkpoint.txt
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 08:34 boinc_mmap_file
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas      4624 Dec 14 08:34 pilotlog.txt
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas    627377 Dec 14 08:34 log.47899042._002231.job.log.1
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas       357 Dec 14 08:34 output.list
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas       620 Dec 14 08:34 runtime_log
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas   1024000 Dec 14 08:34 result.tar.gz
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 08:34 runtime_log.err
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas       659 Dec 14 08:34 32cKDm2Fmo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbJQKDmtnwvQm.diag
[2025-12-14 08:34:21] -rw-r--r-- 1 boincer umatlas     22175 Dec 14 08:34 stderr.txt
[2025-12-14 08:34:21] HITS file was successfully produced:
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas 179549532 Dec 14 08:33 shared/HITS.pool.root.1
[2025-12-14 08:34:21]  *** Contents of shared directory: ***
[2025-12-14 08:34:21] total 369492
[2025-12-14 08:34:21] -rw-r--r-- 2 boincer umatlas 197165612 Dec 14 07:21 ATLAS.root_0
[2025-12-14 08:34:21] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 07:21 start_atlas.sh
[2025-12-14 08:34:21] -rw-r--r-- 2 boincer umatlas    592390 Dec 14 07:21 input.tar.gz
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas 179549532 Dec 14 08:33 HITS.pool.root.1
[2025-12-14 08:34:21] -rw------- 1 boincer umatlas   1024000 Dec 14 08:34 result.tar.gz
08:34:23 (5772): run_atlas exited; CPU time 45254.392267
08:34:23 (5772): called boinc_finish(0)

</stderr_txt>
]]>

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