Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:37:45 (1887895): wrapper (7.7.26015): starting
11:37:45 (1887895): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 11:37:45] Arguments: --nthreads 8
[2025-12-14 11:37:45] Threads: 8
[2025-12-14 11:37:45] Checking for CVMFS
[2025-12-14 11:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 11:37:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 11:37:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 11:37:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 11:37:45] 2.13.3.0 1600164 127 48080 153994 0 188 3555080 4096001 4678 130560 0 759306 99.995 9745 1574 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-12-14 11:37:45] CVMFS is ok
[2025-12-14 11:37:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 11:37:45] Checking for apptainer binary...
[2025-12-14 11:37:45] apptainer is not installed, using version from CVMFS
[2025-12-14 11:37:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 11:37:45] senture-c621e-l
[2025-12-14 11:37:45] apptainer works
[2025-12-14 11:37:45] Set ATHENA_PROC_NUMBER=8
[2025-12-14 11:37:45] Set ATHENA_CORE_NUMBER=8
[2025-12-14 11:37:45] Starting ATLAS job with PandaID=6929716123
[2025-12-14 11:37:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 13:05:10]  *** The last 200 lines of the pilot log: ***
[2025-12-14 13:05:10]  mtime=0
[2025-12-14 13:05:10]  protocol_id=None
[2025-12-14 13:05:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-14 13:05:10]  replicas=None
[2025-12-14 13:05:10]  scope=mc23_13p6TeV
[2025-12-14 13:05:10]  status=None
[2025-12-14 13:05:10]  status_code=0
[2025-12-14 13:05:10]  storage_token=
[2025-12-14 13:05:10]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-6929716123/log.47899042._001880.job.log.tgz.1
[2025-12-14 13:05:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/90/log.47899042._001880.job.log.tgz.1
[2025-12-14 13:05:10]  workdir=None
[2025-12-14 13:05:10] ]
[2025-12-14 13:05:10] 2025-12-14 13:04:26,195 | INFO     | transferring file log.47899042._001880.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-6929716123/log.47899042._001880.job.log.tgz.1 to /var/lib/boinc
[2025-12-14 13:05:10] 2025-12-14 13:04:26,195 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6929716123/log.47899042._001880.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.478990
[2025-12-14 13:05:10] 2025-12-14 13:04:26,216 | INFO     | adding to output.list: log.47899042._001880.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/90/log.47899042._001880.job.log.tg
[2025-12-14 13:05:10] 2025-12-14 13:04:26,217 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 13:05:10] 2025-12-14 13:04:26,217 | INFO     | summary of transferred files:
[2025-12-14 13:05:10] 2025-12-14 13:04:26,217 | INFO     |  -- lfn=log.47899042._001880.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 13:05:10] 2025-12-14 13:04:26,217 | INFO     | stage-out finished correctly
[2025-12-14 13:05:10] 2025-12-14 13:04:26,240 | INFO     | monitor loop #379: job 0:6929716123 is in state 'finished'
[2025-12-14 13:05:10] 2025-12-14 13:04:26,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 13:05:10] 2025-12-14 13:04:26,299 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 13:05:10] 2025-12-14 13:04:26,377 | INFO     | job 6929716123 has state=finished
[2025-12-14 13:05:10] 2025-12-14 13:04:26,378 | INFO     | preparing for final server update for job 6929716123 in state='finished'
[2025-12-14 13:05:10] 2025-12-14 13:04:26,378 | INFO     | this job has now completed (state=finished)
[2025-12-14 13:05:10] 2025-12-14 13:04:26,378 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 13:05:10] 2025-12-14 13:04:26,378 | INFO     | log transfer has been attempted: DONE
[2025-12-14 13:05:10] 2025-12-14 13:04:26,378 | INFO     | job 6929716123 has finished - writing final server update
[2025-12-14 13:05:10] 2025-12-14 13:04:26,379 | INFO     | total number of processed events: 400 (read)
[2025-12-14 13:05:10] 2025-12-14 13:04:26,380 | INFO     | executing command: lscpu
[2025-12-14 13:05:10] 2025-12-14 13:04:26,421 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 13:05:10] 2025-12-14 13:04:26,593 | INFO     | time since job start (5191s) is within the limit (174528.0s)
[2025-12-14 13:05:10] 2025-12-14 13:04:28,598 | INFO     | time since job start (5193s) is within the limit (174528.0s)
[2025-12-14 13:05:10] 2025-12-14 13:04:28,749 | INFO     | monitor loop #380: job 0:6929716123 is in state 'finished'
[2025-12-14 13:05:10] 2025-12-14 13:04:28,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 13:05:10] 2025-12-14 13:04:30,604 | INFO     | time since job start (5195s) is within the limit (174528.0s)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,204 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 13:05:10] 2025-12-14 13:04:31,208 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0059999999967
[2025-12-14 13:05:10] 2025-12-14 13:04:31,218 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6929716123/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,219 | INFO     | extracted standard info from prmon json
[2025-12-14 13:05:10] 2025-12-14 13:04:31,219 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 13:05:10] 2025-12-14 13:04:31,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 13:05:10] 2025-12-14 13:04:31,220 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 13:05:10] 2025-12-14 13:04:31,220 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 13:05:10] 2025-12-14 13:04:31,222 | INFO     | fitting pss+swap vs Time
[2025-12-14 13:05:10] 2025-12-14 13:04:31,222 | INFO     | sum of square deviations: 147126479.5
[2025-12-14 13:05:10] 2025-12-14 13:04:31,222 | INFO     | sum of deviations: -2246395363.5
[2025-12-14 13:05:10] 2025-12-14 13:04:31,222 | INFO     | mean x: 1765714952.5
[2025-12-14 13:05:10] 2025-12-14 13:04:31,222 | INFO     | mean y: 2524268.064102564
[2025-12-14 13:05:10] 2025-12-14 13:04:31,223 | INFO     | intersect: 26962279548.27267
[2025-12-14 13:05:10] 2025-12-14 13:04:31,223 | INFO     | chi2: 0.004626367155482053
[2025-12-14 13:05:10] 2025-12-14 13:04:31,223 | INFO     | current memory leak: -15.27 B/s (using 78 data points, chi2=0.00)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,223 | INFO     | could have reported an average CPU frequency of 2600 MHz (6 samples)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,223 | INFO     | ..............................
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . Timing measurements:
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . get job = 0 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . initial setup = 1 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . payload setup = 5 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . stage-in = 0 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . payload execution = 5167 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . stage-out = 0 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | . log creation = 0 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,224 | INFO     | ..............................
[2025-12-14 13:05:10] 2025-12-14 13:04:31,307 | INFO     | 
[2025-12-14 13:05:10] 2025-12-14 13:04:31,307 | INFO     | job summary report
[2025-12-14 13:05:10] 2025-12-14 13:04:31,307 | INFO     | --------------------------------------------------
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | PanDA job id: 6929716123
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | task id: 47899042
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | errors: (none)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | pilot state: finished 
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | transexitcode: 0
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | exeerrorcode: 0
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | exeerrordiag: 
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | exitcode: 0
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | exitmsg: OK
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | cpuconsumptiontime: 38912 s
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | nevents: 400
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | neventsw: 0
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | pid: 1905693
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | pgrp: 1905693
[2025-12-14 13:05:10] 2025-12-14 13:04:31,308 | INFO     | corecount: 8
[2025-12-14 13:05:10] 2025-12-14 13:04:31,309 | INFO     | event service: False
[2025-12-14 13:05:10] 2025-12-14 13:04:31,309 | INFO     | sizes: {0: 2283770, 1: 2283969, 4: 2284231, 11: 2284259, 5176: 2310651, 5177: 2319847, 5182: 2319985}
[2025-12-14 13:05:10] 2025-12-14 13:04:31,309 | INFO     | --------------------------------------------------
[2025-12-14 13:05:10] 2025-12-14 13:04:31,309 | INFO     | 
[2025-12-14 13:05:10] 2025-12-14 13:04:31,309 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-12-14 13:05:10] 2025-12-14 13:04:31,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 13:05:10] 2025-12-14 13:04:31,336 | INFO     | job 6929716123 has completed (purged errors)
[2025-12-14 13:05:10] 2025-12-14 13:04:31,336 | INFO     | overall cleanup function is called
[2025-12-14 13:05:10] 2025-12-14 13:04:32,343 | INFO     | --- collectZombieJob: --- 10, [1905693]
[2025-12-14 13:05:10] 2025-12-14 13:04:32,343 | INFO     | zombie collector waiting for pid 1905693
[2025-12-14 13:05:10] 2025-12-14 13:04:32,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 13:05:10] 2025-12-14 13:04:32,343 | INFO     | collected zombie processes
[2025-12-14 13:05:10] 2025-12-14 13:04:32,343 | INFO     | will attempt to kill all subprocesses of pid=1905693
[2025-12-14 13:05:10] 2025-12-14 13:04:32,591 | INFO     | process IDs to be killed: [1905693] (in reverse order)
[2025-12-14 13:05:10] 2025-12-14 13:04:32,688 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 13:05:10] 2025-12-14 13:04:32,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 13:05:10] 2025-12-14 13:04:32,696 | INFO     | did not find any defunct processes belonging to 1905693
[2025-12-14 13:05:10] 2025-12-14 13:04:32,703 | INFO     | did not find any defunct processes belonging to 1905693
[2025-12-14 13:05:10] 2025-12-14 13:04:32,703 | INFO     | ready for new job
[2025-12-14 13:05:10] 2025-12-14 13:04:32,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 13:05:10] 2025-12-14 13:04:32,705 | INFO     | ***************************************
[2025-12-14 13:05:10] 2025-12-14 13:04:32,705 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 13:05:10] 2025-12-14 13:04:32,705 | INFO     | ***************************************
[2025-12-14 13:05:10] 2025-12-14 13:04:32,705 | INFO     | 
[2025-12-14 13:05:10] 2025-12-14 13:04:32,708 | INFO     | pilot is running in a VM
[2025-12-14 13:05:10] 2025-12-14 13:04:32,709 | INFO     | architecture information:
[2025-12-14 13:05:10] 2025-12-14 13:04:32,709 | INFO     | executing command: cat /etc/os-release
[2025-12-14 13:05:10] 2025-12-14 13:04:32,724 | INFO     | cat /etc/os-release:
[2025-12-14 13:05:10] NAME="CentOS Linux"
[2025-12-14 13:05:10] VERSION="7 (Core)"
[2025-12-14 13:05:10] ID="centos"
[2025-12-14 13:05:10] ID_LIKE="rhel fedora"
[2025-12-14 13:05:10] VERSION_ID="7"
[2025-12-14 13:05:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 13:05:10] ANSI_COLOR="0;31"
[2025-12-14 13:05:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 13:05:10] HOME_URL="https://www.centos.org/"
[2025-12-14 13:05:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 13:05:10] 
[2025-12-14 13:05:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 13:05:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 13:05:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 13:05:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 13:05:10] 
[2025-12-14 13:05:10] 2025-12-14 13:04:32,725 | INFO     | ***************************************
[2025-12-14 13:05:10] 2025-12-14 13:04:33,227 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-12-14 13:05:10] 2025-12-14 13:04:33,248 | INFO     | sufficient remaining disk space (115698827264 B)
[2025-12-14 13:05:10] 2025-12-14 13:04:33,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 13:05:10] 2025-12-14 13:04:33,249 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 13:05:10] 2025-12-14 13:04:33,249 | INFO     | update_server=False
[2025-12-14 13:05:10] 2025-12-14 13:04:33,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 13:05:10] 2025-12-14 13:04:33,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 13:05:10] 2025-12-14 13:04:33,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 13:05:10] 2025-12-14 13:04:33,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 13:05:10] 2025-12-14 13:04:33,253 | INFO     | aborting loop
[2025-12-14 13:05:10] 2025-12-14 13:04:33,686 | INFO     | all job control threads have been joined
[2025-12-14 13:05:10] 2025-12-14 13:04:33,927 | INFO     | all payload control threads have been joined
[2025-12-14 13:05:10] 2025-12-14 13:04:34,138 | INFO     | all data control threads have been joined
[2025-12-14 13:05:10] 2025-12-14 13:04:34,254 | INFO     | [job] retrieve thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,258 | INFO     | [job] queue monitor thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,259 | INFO     | [job] job monitor thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,306 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 13:05:10] 2025-12-14 13:04:34,466 | INFO     | [payload] failed_post thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,496 | INFO     | [payload] validate_post thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,691 | INFO     | [job] control thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,748 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,933 | INFO     | [payload] control thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:34,954 | INFO     | [job] validate thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:35,144 | INFO     | [data] control thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:35,419 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:35,706 | INFO     | [data] copytool_in thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:36,318 | INFO     | [data] copytool_out thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:37,259 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:04:43,746 | INFO     | job.realtimelogging is not enabled
[2025-12-14 13:05:10] 2025-12-14 13:04:44,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 13:05:10] 2025-12-14 13:05:02,762 | INFO     | [monitor] cgroup control has ended
[2025-12-14 13:05:10] 2025-12-14 13:05:04,002 | INFO     | PID=1898748 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 13:05:10] 2025-12-14 13:05:04,002 | INFO     | .. there are 8 such processes running
[2025-12-14 13:05:10] 2025-12-14 13:05:04,002 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 13:05:10] 2025-12-14 13:05:04,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 13:05:10] 2025-12-14 13:05:04,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 13:05:10] 2025-12-14 13:05:04,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344058484544)>', '<ExcThread(monitor, started 140343643182848)>']
[2025-12-14 13:05:10] 2025-12-14 13:05:05,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 13:05:10] 2025-12-14 13:05:05,005 | INFO     | [monitor] control thread has ended
[2025-12-14 13:05:10] 2025-12-14 13:05:09,709 | INFO     | all workflow threads have been joined
[2025-12-14 13:05:10] 2025-12-14 13:05:09,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 13:05:10] 2025-12-14 13:05:09,709 | INFO     | traces error code: 0
[2025-12-14 13:05:10] 2025-12-14 13:05:09,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 13:05:10] 2025-12-14 13:05:09,857 [wrapper] ==== pilot stdout END ====
[2025-12-14 13:05:10] 2025-12-14 13:05:09,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 13:05:10] 2025-12-14 13:05:09,864 [wrapper] pilotpid: 1898748
[2025-12-14 13:05:10] 2025-12-14 13:05:09,867 [wrapper] Pilot exit status: 0
[2025-12-14 13:05:10] 2025-12-14 13:05:09,878 [wrapper] pandaids: 6929716123
[2025-12-14 13:05:10] 2025-12-14 13:05:09,934 [wrapper] cleanup supervisor_pilot 2007499 1898749
[2025-12-14 13:05:10] 2025-12-14 13:05:09,938 [wrapper] Test setup, not cleaning
[2025-12-14 13:05:10] 2025-12-14 13:05:09,940 [wrapper] apfmon messages muted
[2025-12-14 13:05:10] 2025-12-14 13:05:09,943 [wrapper] ==== wrapper stdout END ====
[2025-12-14 13:05:10] 2025-12-14 13:05:09,946 [wrapper] ==== wrapper stderr END ====
[2025-12-14 13:05:10]  *** Error codes and diagnostics ***
[2025-12-14 13:05:10]     "exeErrorCode": 0,
[2025-12-14 13:05:10]     "exeErrorDiag": "",
[2025-12-14 13:05:10]     "pilotErrorCode": 0,
[2025-12-14 13:05:10]     "pilotErrorDiag": "",
[2025-12-14 13:05:10]  *** Listing of results directory ***
[2025-12-14 13:05:10] total 376580
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc    579449 Dec 13 21:19 pilot3.tar.gz
[2025-12-14 13:05:10] -rwx------ 1 boinc boinc     36322 Dec 13 21:20 runpilot2-wrapper.sh
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc      5112 Dec 13 21:21 queuedata.json
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc       100 Dec 14 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 13:05:10] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 11:37 run_atlas
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc       105 Dec 14 11:37 job.xml
[2025-12-14 13:05:10] -rw-r--r-- 2 boinc boinc 196384594 Dec 14 11:37 EVNT.47899040._000096.pool.root.1
[2025-12-14 13:05:10] drwxrwx--x 2 boinc boinc      4096 Dec 14 11:37 shared
[2025-12-14 13:05:10] -rw-r--r-- 2 boinc boinc    592386 Dec 14 11:37 input.tar.gz
[2025-12-14 13:05:10] -rw-r--r-- 2 boinc boinc     15847 Dec 14 11:37 start_atlas.sh
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc         0 Dec 14 11:37 boinc_setup_complete
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc      6682 Dec 14 11:37 init_data.xml
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc         0 Dec 14 11:37 boinc_lockfile
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc      2491 Dec 14 11:37 pandaJob.out
[2025-12-14 13:05:10] -rw------- 1 boinc boinc        50 Dec 14 11:37 setup.sh.local
[2025-12-14 13:05:10] -rw------- 1 boinc boinc    991728 Dec 14 11:37 agis_schedconf.cvmfs.json
[2025-12-14 13:05:10] -rw------- 1 boinc boinc   1516240 Dec 14 11:37 agis_ddmendpoints.agis.ALL.json
[2025-12-14 13:05:10] drwx------ 5 boinc boinc      4096 Dec 14 11:37 pilot3
[2025-12-14 13:05:10] -rw------- 1 boinc boinc 183141503 Dec 14 13:03 HITS.47899042._001880.pool.root.1
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc       530 Dec 14 13:04 boinc_task_state.xml
[2025-12-14 13:05:10] -rw------- 1 boinc boinc      1031 Dec 14 13:04 memory_monitor_summary.json
[2025-12-14 13:05:10] -rw------- 1 boinc boinc    325859 Dec 14 13:04 log.47899042._001880.job.log.tgz.1
[2025-12-14 13:05:10] -rw------- 1 boinc boinc      7787 Dec 14 13:04 heartbeat.json
[2025-12-14 13:05:10] -rw------- 1 boinc boinc        95 Dec 14 13:04 pilot_heartbeat.json
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc        27 Dec 14 13:04 wrapper_checkpoint.txt
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc      8192 Dec 14 13:04 boinc_mmap_file
[2025-12-14 13:05:10] -rw------- 1 boinc boinc      4965 Dec 14 13:05 pilotlog.txt
[2025-12-14 13:05:10] -rw------- 1 boinc boinc    757654 Dec 14 13:05 log.47899042._001880.job.log.1
[2025-12-14 13:05:10] -rw------- 1 boinc boinc       357 Dec 14 13:05 output.list
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc       620 Dec 14 13:05 runtime_log
[2025-12-14 13:05:10] -rw------- 1 boinc boinc   1105920 Dec 14 13:05 result.tar.gz
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc      9424 Dec 14 13:05 runtime_log.err
[2025-12-14 13:05:10] -rw------- 1 boinc boinc       648 Dec 14 13:05 Br1LDmTDmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqNUKDmJyxDVo.diag
[2025-12-14 13:05:10] -rw-r--r-- 1 boinc boinc     21419 Dec 14 13:05 stderr.txt
[2025-12-14 13:05:10] HITS file was successfully produced:
[2025-12-14 13:05:10] -rw------- 1 boinc boinc 183141503 Dec 14 13:03 shared/HITS.pool.root.1
[2025-12-14 13:05:10]  *** Contents of shared directory: ***
[2025-12-14 13:05:10] total 372320
[2025-12-14 13:05:10] -rw-r--r-- 2 boinc boinc 196384594 Dec 14 11:37 ATLAS.root_0
[2025-12-14 13:05:10] -rw-r--r-- 2 boinc boinc    592386 Dec 14 11:37 input.tar.gz
[2025-12-14 13:05:10] -rw-r--r-- 2 boinc boinc     15847 Dec 14 11:37 start_atlas.sh
[2025-12-14 13:05:10] -rw------- 1 boinc boinc 183141503 Dec 14 13:03 HITS.pool.root.1
[2025-12-14 13:05:10] -rw------- 1 boinc boinc   1105920 Dec 14 13:05 result.tar.gz
13:05:11 (1887895): run_atlas exited; CPU time 39064.783069
13:05:11 (1887895): called boinc_finish(0)

</stderr_txt>
]]>

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