Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:51:17 (12182): wrapper (7.7.26015): starting
06:51:17 (12182): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 06:51:17] Arguments: --nthreads 12
[2025-12-14 06:51:17] Threads: 12
[2025-12-14 06:51:17] Checking for CVMFS
[2025-12-14 06:51:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 06:51:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 06:51:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 06:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 06:51:18] 2.11.2.0 2914 313565 93432 153994 2 59 16076945 20275201 1 130560 1 138822588 99.963 18317796 15009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 06:51:18] CVMFS is ok
[2025-12-14 06:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 06:51:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 06:51:18] Further information can be found at the LHC@home message board.
[2025-12-14 06:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 06:51:18] Checking for apptainer binary...
[2025-12-14 06:51:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 06:51:18] Running /usr/bin/apptainer --version
[2025-12-14 06:51:18] apptainer version 1.3.2-1.el7
[2025-12-14 06:51:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 06:51:19] c-205-5.aglt2.org
[2025-12-14 06:51:19] apptainer works
[2025-12-14 06:51:19] Set ATHENA_PROC_NUMBER=12
[2025-12-14 06:51:19] Set ATHENA_CORE_NUMBER=12
[2025-12-14 06:51:19] Starting ATLAS job with PandaID=6929716245
[2025-12-14 06:51:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 08:03:47]  *** The last 200 lines of the pilot log: ***
[2025-12-14 08:03:47]  replicas=None
[2025-12-14 08:03:47]  scope=mc23_13p6TeV
[2025-12-14 08:03:47]  status=None
[2025-12-14 08:03:47]  status_code=0
[2025-12-14 08:03:47]  storage_token=
[2025-12-14 08:03:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929716245/log.47899042._002002.job.log.tgz.1
[2025-12-14 08:03:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/32/log.47899042._002002.job.log.tgz.1
[2025-12-14 08:03:47]  workdir=None
[2025-12-14 08:03:47] ]
[2025-12-14 08:03:47] 2025-12-14 13:02:45,310 | INFO     | transferring file log.47899042._002002.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929716245/log.47899042._002002.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 08:03:47] 2025-12-14 13:02:45,310 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929716245/log.47899042._002002.job.log.tgz.1 /tmp/boinchome/slots/0/log.47899042._002002.job
[2025-12-14 08:03:47] 2025-12-14 13:02:45,332 | INFO     | adding to output.list: log.47899042._002002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/32/log.47899042._002002.job.log.tg
[2025-12-14 08:03:47] 2025-12-14 13:02:45,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 08:03:47] 2025-12-14 13:02:45,333 | INFO     | summary of transferred files:
[2025-12-14 08:03:47] 2025-12-14 13:02:45,334 | INFO     |  -- lfn=log.47899042._002002.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 08:03:47] 2025-12-14 13:02:45,334 | INFO     | stage-out finished correctly
[2025-12-14 08:03:47] 2025-12-14 13:02:46,076 | INFO     | time since job start (4272s) is within the limit (174528.0s)
[2025-12-14 08:03:47] 2025-12-14 13:02:47,478 | INFO     | monitor loop #321: job 0:6929716245 is in state 'finished'
[2025-12-14 08:03:47] 2025-12-14 13:02:47,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:03:47] 2025-12-14 13:02:47,869 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 08:03:47] 2025-12-14 13:02:48,076 | INFO     | time since job start (4274s) is within the limit (174528.0s)
[2025-12-14 08:03:47] 2025-12-14 13:02:48,660 | INFO     | job 6929716245 has state=finished
[2025-12-14 08:03:47] 2025-12-14 13:02:48,660 | INFO     | preparing for final server update for job 6929716245 in state='finished'
[2025-12-14 08:03:47] 2025-12-14 13:02:48,661 | INFO     | this job has now completed (state=finished)
[2025-12-14 08:03:47] 2025-12-14 13:02:48,661 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 08:03:47] 2025-12-14 13:02:48,661 | INFO     | log transfer has been attempted: DONE
[2025-12-14 08:03:47] 2025-12-14 13:02:48,661 | INFO     | job 6929716245 has finished - writing final server update
[2025-12-14 08:03:47] 2025-12-14 13:02:48,662 | INFO     | total number of processed events: 400 (read)
[2025-12-14 08:03:47] 2025-12-14 13:02:48,663 | INFO     | executing command: lscpu
[2025-12-14 08:03:47] 2025-12-14 13:02:48,689 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 08:03:47] 2025-12-14 13:02:49,988 | INFO     | monitor loop #322: job 0:6929716245 is in state 'finished'
[2025-12-14 08:03:47] 2025-12-14 13:02:49,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:03:47] 2025-12-14 13:02:50,082 | INFO     | time since job start (4276s) is within the limit (174528.0s)
[2025-12-14 08:03:47] 2025-12-14 13:02:52,083 | INFO     | time since job start (4278s) is within the limit (174528.0s)
[2025-12-14 08:03:47] 2025-12-14 13:02:52,491 | INFO     | monitor loop #323: job 0:6929716245 is in state 'finished'
[2025-12-14 08:03:47] 2025-12-14 13:02:52,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,089 | INFO     | time since job start (4280s) is within the limit (174528.0s)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,686 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 08:03:47] 2025-12-14 13:02:54,690 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-12-14 08:03:47] 2025-12-14 13:02:54,693 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929716245/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,694 | INFO     | extracted standard info from prmon json
[2025-12-14 08:03:47] 2025-12-14 13:02:54,694 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 08:03:47] 2025-12-14 13:02:54,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 08:03:47] 2025-12-14 13:02:54,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 08:03:47] 2025-12-14 13:02:54,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 08:03:47] 2025-12-14 13:02:54,697 | INFO     | fitting pss+swap vs Time
[2025-12-14 08:03:47] 2025-12-14 13:02:54,697 | INFO     | sum of square deviations: 77515872.0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,697 | INFO     | sum of deviations: -7809125694.0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,698 | INFO     | mean x: 1765715320.0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,698 | INFO     | mean y: 2799440.301587302
[2025-12-14 08:03:47] 2025-12-14 13:02:54,698 | INFO     | intersect: 177884986893.49094
[2025-12-14 08:03:47] 2025-12-14 13:02:54,698 | INFO     | chi2: 0.049059828600744704
[2025-12-14 08:03:47] 2025-12-14 13:02:54,698 | INFO     | current memory leak: -100.74 B/s (using 63 data points, chi2=0.05)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,698 | INFO     | could have reported an average CPU frequency of 2071 MHz (6 samples)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | ..............................
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . Timing measurements:
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . get job = 0 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . initial setup = 2 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . payload setup = 7 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . stage-in = 0 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . payload execution = 4241 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . stage-out = 0 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,699 | INFO     | . log creation = 0 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,700 | INFO     | ..............................
[2025-12-14 08:03:47] 2025-12-14 13:02:54,780 | INFO     | 
[2025-12-14 08:03:47] 2025-12-14 13:02:54,780 | INFO     | job summary report
[2025-12-14 08:03:47] 2025-12-14 13:02:54,780 | INFO     | --------------------------------------------------
[2025-12-14 08:03:47] 2025-12-14 13:02:54,780 | INFO     | PanDA job id: 6929716245
[2025-12-14 08:03:47] 2025-12-14 13:02:54,780 | INFO     | task id: 47899042
[2025-12-14 08:03:47] 2025-12-14 13:02:54,780 | INFO     | errors: (none)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 08:03:47] 2025-12-14 13:02:54,781 | INFO     | pilot state: finished 
[2025-12-14 08:03:47] 2025-12-14 13:02:54,781 | INFO     | transexitcode: 0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,781 | INFO     | exeerrorcode: 0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,781 | INFO     | exeerrordiag: 
[2025-12-14 08:03:47] 2025-12-14 13:02:54,781 | INFO     | exitcode: 0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | exitmsg: OK
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | cpuconsumptiontime: 45548 s
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | nevents: 400
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | neventsw: 0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | pid: 22223
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | pgrp: 22223
[2025-12-14 08:03:47] 2025-12-14 13:02:54,782 | INFO     | corecount: 12
[2025-12-14 08:03:47] 2025-12-14 13:02:54,783 | INFO     | event service: False
[2025-12-14 08:03:47] 2025-12-14 13:02:54,783 | INFO     | sizes: {0: 2283932, 1: 2283932, 5: 2284222, 11: 2284278, 4252: 2310282, 4255: 2319280, 4257: 2319464, 4264: 2319658}
[2025-12-14 08:03:47] 2025-12-14 13:02:54,783 | INFO     | --------------------------------------------------
[2025-12-14 08:03:47] 2025-12-14 13:02:54,783 | INFO     | 
[2025-12-14 08:03:47] 2025-12-14 13:02:54,783 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 08:03:47] 2025-12-14 13:02:54,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 08:03:47] 2025-12-14 13:02:54,812 | INFO     | job 6929716245 has completed (purged errors)
[2025-12-14 08:03:47] 2025-12-14 13:02:54,812 | INFO     | overall cleanup function is called
[2025-12-14 08:03:47] 2025-12-14 13:02:55,205 | INFO     | PID=15863 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 08:03:47] 2025-12-14 13:02:55,820 | INFO     | --- collectZombieJob: --- 10, [22223]
[2025-12-14 08:03:47] 2025-12-14 13:02:55,820 | INFO     | zombie collector waiting for pid 22223
[2025-12-14 08:03:47] 2025-12-14 13:02:55,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 08:03:47] 2025-12-14 13:02:55,821 | INFO     | collected zombie processes
[2025-12-14 08:03:47] 2025-12-14 13:02:55,821 | INFO     | will attempt to kill all subprocesses of pid=22223
[2025-12-14 08:03:47] 2025-12-14 13:02:55,910 | INFO     | process IDs to be killed: [22223] (in reverse order)
[2025-12-14 08:03:47] 2025-12-14 13:02:55,966 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 08:03:47] 2025-12-14 13:02:55,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 08:03:47] 2025-12-14 13:02:55,970 | INFO     | did not find any defunct processes belonging to 22223
[2025-12-14 08:03:47] 2025-12-14 13:02:55,973 | INFO     | did not find any defunct processes belonging to 22223
[2025-12-14 08:03:47] 2025-12-14 13:02:55,973 | INFO     | ready for new job
[2025-12-14 08:03:47] 2025-12-14 13:02:55,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 08:03:47] 2025-12-14 13:02:55,974 | INFO     | ***************************************
[2025-12-14 08:03:47] 2025-12-14 13:02:55,974 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 08:03:47] 2025-12-14 13:02:55,974 | INFO     | ***************************************
[2025-12-14 08:03:47] 2025-12-14 13:02:55,974 | INFO     | 
[2025-12-14 08:03:47] 2025-12-14 13:02:55,975 | INFO     | architecture information:
[2025-12-14 08:03:47] 2025-12-14 13:02:55,975 | INFO     | executing command: cat /etc/os-release
[2025-12-14 08:03:47] 2025-12-14 13:02:55,992 | INFO     | cat /etc/os-release:
[2025-12-14 08:03:47] NAME="CentOS Linux"
[2025-12-14 08:03:47] VERSION="7 (Core)"
[2025-12-14 08:03:47] ID="centos"
[2025-12-14 08:03:47] ID_LIKE="rhel fedora"
[2025-12-14 08:03:47] VERSION_ID="7"
[2025-12-14 08:03:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 08:03:47] ANSI_COLOR="0;31"
[2025-12-14 08:03:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 08:03:47] HOME_URL="https://www.centos.org/"
[2025-12-14 08:03:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 08:03:47] 
[2025-12-14 08:03:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 08:03:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 08:03:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 08:03:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 08:03:47] 
[2025-12-14 08:03:47] 2025-12-14 13:02:55,993 | INFO     | ***************************************
[2025-12-14 08:03:47] 2025-12-14 13:02:56,496 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 08:03:47] 2025-12-14 13:02:56,514 | INFO     | sufficient remaining disk space (29409411072 B)
[2025-12-14 08:03:47] 2025-12-14 13:02:56,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 08:03:47] 2025-12-14 13:02:56,514 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 08:03:47] 2025-12-14 13:02:56,514 | INFO     | update_server=False
[2025-12-14 08:03:47] 2025-12-14 13:02:56,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 08:03:47] 2025-12-14 13:02:56,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 08:03:47] 2025-12-14 13:02:56,515 | INFO     | aborting loop
[2025-12-14 08:03:47] 2025-12-14 13:02:56,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 08:03:47] 2025-12-14 13:02:56,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 08:03:47] 2025-12-14 13:02:56,702 | INFO     | all data control threads have been joined
[2025-12-14 08:03:47] 2025-12-14 13:02:57,516 | INFO     | [job] queue monitor thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:57,519 | INFO     | [job] retrieve thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:57,520 | INFO     | [job] job monitor thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:57,603 | INFO     | all payload control threads have been joined
[2025-12-14 08:03:47] 2025-12-14 13:02:57,707 | INFO     | [data] control thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:57,766 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:57,974 | INFO     | [job] validate thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,084 | INFO     | all job control threads have been joined
[2025-12-14 08:03:47] 2025-12-14 13:02:58,135 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,232 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 08:03:47] 2025-12-14 13:02:58,522 | INFO     | [data] copytool_out thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,609 | INFO     | [payload] control thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,787 | INFO     | [payload] validate_post thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,806 | INFO     | [payload] failed_post thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:58,925 | INFO     | [data] copytool_in thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:02:59,089 | INFO     | [job] control thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:03:02,464 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:03:06,735 | INFO     | job.realtimelogging is not enabled
[2025-12-14 08:03:47] 2025-12-14 13:03:07,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 08:03:47] 2025-12-14 13:03:27,408 | INFO     | PID=15863 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 08:03:47] 2025-12-14 13:03:27,408 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 08:03:47] 2025-12-14 13:03:27,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 08:03:47] 2025-12-14 13:03:27,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 08:03:47] 2025-12-14 13:03:40,847 | INFO     | [monitor] cgroup control has ended
[2025-12-14 08:03:47] 2025-12-14 13:03:41,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895149569856)>', '<ExcThread(monitor, started 139894710060800)>']
[2025-12-14 08:03:47] 2025-12-14 13:03:42,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 08:03:47] 2025-12-14 13:03:42,485 | INFO     | [monitor] control thread has ended
[2025-12-14 08:03:47] 2025-12-14 13:03:46,693 | INFO     | all workflow threads have been joined
[2025-12-14 08:03:47] 2025-12-14 13:03:46,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 08:03:47] 2025-12-14 13:03:46,699 | INFO     | traces error code: 0
[2025-12-14 08:03:47] 2025-12-14 13:03:46,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 08:03:47] 2025-12-14 13:03:46,789 [wrapper] ==== pilot stdout END ====
[2025-12-14 08:03:47] 2025-12-14 13:03:46,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 08:03:47] 2025-12-14 13:03:46,797 [wrapper] pilotpid: 15863
[2025-12-14 08:03:47] 2025-12-14 13:03:46,801 [wrapper] Pilot exit status: 0
[2025-12-14 08:03:47] 2025-12-14 13:03:46,817 [wrapper] pandaids: 6929716245
[2025-12-14 08:03:47] 2025-12-14 13:03:46,865 [wrapper] cleanup supervisor_pilot 12565 15864
[2025-12-14 08:03:47] 2025-12-14 13:03:46,869 [wrapper] Test setup, not cleaning
[2025-12-14 08:03:47] 2025-12-14 13:03:46,872 [wrapper] apfmon messages muted
[2025-12-14 08:03:47] 2025-12-14 13:03:46,876 [wrapper] ==== wrapper stdout END ====
[2025-12-14 08:03:47] 2025-12-14 13:03:46,880 [wrapper] ==== wrapper stderr END ====
[2025-12-14 08:03:47]  *** Error codes and diagnostics ***
[2025-12-14 08:03:47]     "exeErrorCode": 0,
[2025-12-14 08:03:47]     "exeErrorDiag": "",
[2025-12-14 08:03:47]     "pilotErrorCode": 0,
[2025-12-14 08:03:47]     "pilotErrorDiag": "",
[2025-12-14 08:03:47]  *** Listing of results directory ***
[2025-12-14 08:03:47] total 375820
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-14 08:03:47] -rwx------ 1 boincer umatlas     36322 Dec 13 16:20 runpilot2-wrapper.sh
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 16:21 queuedata.json
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas       100 Dec 14 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 08:03:47] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 06:51 run_atlas
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas       105 Dec 14 06:51 job.xml
[2025-12-14 08:03:47] -rw-r--r-- 2 boincer umatlas 198669289 Dec 14 06:51 EVNT.47899040._000101.pool.root.1
[2025-12-14 08:03:47] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 06:51 start_atlas.sh
[2025-12-14 08:03:47] drwxrwx--x 2 boincer umatlas      4096 Dec 14 06:51 shared
[2025-12-14 08:03:47] -rw-r--r-- 2 boincer umatlas    592383 Dec 14 06:51 input.tar.gz
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas         0 Dec 14 06:51 boinc_lockfile
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas      2490 Dec 14 06:51 pandaJob.out
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas        57 Dec 14 06:51 setup.sh.local
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas    991728 Dec 14 06:51 agis_schedconf.cvmfs.json
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas   1516240 Dec 14 06:51 agis_ddmendpoints.agis.ALL.json
[2025-12-14 08:03:47] drwx------ 5 boincer umatlas      4096 Dec 14 06:51 pilot3
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas 180261006 Dec 14 08:02 HITS.47899042._002002.pool.root.1
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas        95 Dec 14 08:02 pilot_heartbeat.json
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas       529 Dec 14 08:02 boinc_task_state.xml
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas      1043 Dec 14 08:02 memory_monitor_summary.json
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas    364910 Dec 14 08:02 log.47899042._002002.job.log.tgz.1
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas      7841 Dec 14 08:02 heartbeat.json
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas      5952 Dec 14 08:03 init_data.xml
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 08:03 boinc_mmap_file
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas        27 Dec 14 08:03 wrapper_checkpoint.txt
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas      4818 Dec 14 08:03 pilotlog.txt
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas    625362 Dec 14 08:03 log.47899042._002002.job.log.1
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas       357 Dec 14 08:03 output.list
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas       620 Dec 14 08:03 runtime_log
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas   1013760 Dec 14 08:03 result.tar.gz
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas      9339 Dec 14 08:03 runtime_log.err
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas       658 Dec 14 08:03 cABMDmTDmo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdEQKDm2u6Dmn.diag
[2025-12-14 08:03:47] -rw-r--r-- 1 boincer umatlas     21988 Dec 14 08:03 stderr.txt
[2025-12-14 08:03:47] HITS file was successfully produced:
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas 180261006 Dec 14 08:02 shared/HITS.pool.root.1
[2025-12-14 08:03:47]  *** Contents of shared directory: ***
[2025-12-14 08:03:47] total 371648
[2025-12-14 08:03:47] -rw-r--r-- 2 boincer umatlas 198669289 Dec 14 06:51 ATLAS.root_0
[2025-12-14 08:03:47] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 06:51 start_atlas.sh
[2025-12-14 08:03:47] -rw-r--r-- 2 boincer umatlas    592383 Dec 14 06:51 input.tar.gz
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas 180261006 Dec 14 08:02 HITS.pool.root.1
[2025-12-14 08:03:47] -rw------- 1 boincer umatlas   1013760 Dec 14 08:03 result.tar.gz
08:03:48 (12182): run_atlas exited; CPU time 45529.342648
08:03:48 (12182): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN