Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:20 (16603): wrapper (7.7.26015): starting
15:29:20 (16603): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 15:29:20] Arguments: --nthreads 8
[2025-12-14 15:29:20] Threads: 8
[2025-12-14 15:29:20] Checking for CVMFS
[2025-12-14 15:29:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 15:29:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 15:29:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 15:29:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 15:29:22] 2.11.2.0 8605 111414 126716 153998 1 60 15675464 25165825 4412 130560 38 34792419 99.794 26569826 1906 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 15:29:22] CVMFS is ok
[2025-12-14 15:29:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 15:29:22] Checking for apptainer binary...
[2025-12-14 15:29:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 15:29:22] Running /usr/bin/apptainer --version
[2025-12-14 15:29:22] apptainer version 1.3.2-1.el7
[2025-12-14 15:29:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 15:29:36] cg-vwn213.simple-grid.lan
[2025-12-14 15:29:36] apptainer works
[2025-12-14 15:29:36] Set ATHENA_PROC_NUMBER=8
[2025-12-14 15:29:36] Set ATHENA_CORE_NUMBER=8
[2025-12-14 15:29:36] Starting ATLAS job with PandaID=6929410330
[2025-12-14 15:29:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 21:18:16]  *** The last 200 lines of the pilot log: ***
[2025-12-14 21:18:16] 2025-12-14 20:17:33,682 | INFO     | monitor loop #1400: job 0:6929410330 is in state 'finished'
[2025-12-14 21:18:16] 2025-12-14 20:17:33,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 21:18:16] 2025-12-14 20:17:34,732 | INFO     | time since job start (20701s) is within the limit (174528.0s)
[2025-12-14 21:18:16] 2025-12-14 20:17:34,732 | INFO     | 20704s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-14 21:18:16] 2025-12-14 20:17:36,188 | INFO     | monitor loop #1401: job 0:6929410330 is in state 'finished'
[2025-12-14 21:18:16] 2025-12-14 20:17:36,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 21:18:16] 2025-12-14 20:17:36,737 | INFO     | time since job start (20703s) is within the limit (174528.0s)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 21:18:16] 2025-12-14 20:17:37,460 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 21:18:16] 2025-12-14 20:17:37,462 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6929410330/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,463 | INFO     | extracted standard info from prmon json
[2025-12-14 21:18:16] 2025-12-14 20:17:37,463 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 21:18:16] 2025-12-14 20:17:37,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 21:18:16] 2025-12-14 20:17:37,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 21:18:16] 2025-12-14 20:17:37,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 21:18:16] 2025-12-14 20:17:37,472 | INFO     | fitting pss+swap vs Time
[2025-12-14 21:18:16] 2025-12-14 20:17:37,473 | INFO     | sum of square deviations: 11973599384.5
[2025-12-14 21:18:16] 2025-12-14 20:17:37,477 | INFO     | sum of deviations: 13820091832.5
[2025-12-14 21:18:16] 2025-12-14 20:17:37,477 | INFO     | mean x: 1765733093.5
[2025-12-14 21:18:16] 2025-12-14 20:17:37,477 | INFO     | mean y: 2496704.103550296
[2025-12-14 21:18:16] 2025-12-14 20:17:37,477 | INFO     | intersect: -2035536532.2049756
[2025-12-14 21:18:16] 2025-12-14 20:17:37,478 | INFO     | chi2: 1.6178111488245872
[2025-12-14 21:18:16] 2025-12-14 20:17:37,478 | INFO     | sum of square deviations: 11450045382.0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,482 | INFO     | sum of deviations: 13512511623.999989
[2025-12-14 21:18:16] 2025-12-14 20:17:37,483 | INFO     | mean x: 1765732941.0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,483 | INFO     | mean y: 2496614.1051051053
[2025-12-14 21:18:16] 2025-12-14 20:17:37,483 | INFO     | intersect: -2081293108.4797854
[2025-12-14 21:18:16] 2025-12-14 20:17:37,484 | INFO     | chi2: 1.617989433342567
[2025-12-14 21:18:16] 2025-12-14 20:17:37,484 | INFO     | current chi2=1.617989433342567 (change=-0.011020106896245954 %)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,484 | INFO     | right removable region: 332
[2025-12-14 21:18:16] 2025-12-14 20:17:37,485 | INFO     | sum of square deviations: 11450045382.0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,489 | INFO     | sum of deviations: -37468278574.99999
[2025-12-14 21:18:16] 2025-12-14 20:17:37,489 | INFO     | mean x: 1765733246.0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,489 | INFO     | mean y: 2511542.2882882883
[2025-12-14 21:18:16] 2025-12-14 20:17:37,489 | INFO     | intersect: 5780565946.707678
[2025-12-14 21:18:16] 2025-12-14 20:17:37,490 | INFO     | chi2: 0.17954002100807936
[2025-12-14 21:18:16] 2025-12-14 20:17:37,490 | INFO     | current chi2=0.17954002100807936 (change=88.90228806133996 %)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,490 | INFO     | sum of square deviations: 10941980042.0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,494 | INFO     | sum of deviations: -33944794287.5
[2025-12-14 21:18:16] 2025-12-14 20:17:37,495 | INFO     | mean x: 1765733398.5
[2025-12-14 21:18:16] 2025-12-14 20:17:37,495 | INFO     | mean y: 2510469.198170732
[2025-12-14 21:18:16] 2025-12-14 20:17:37,495 | INFO     | intersect: 5480262827.417173
[2025-12-14 21:18:16] 2025-12-14 20:17:37,496 | INFO     | chi2: 0.16464569310492977
[2025-12-14 21:18:16] 2025-12-14 20:17:37,496 | INFO     | current chi2=0.16464569310492977 (change=8.29582608909205 %)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,496 | INFO     | left removable region: 20
[2025-12-14 21:18:16] 2025-12-14 20:17:37,496 | INFO     | sum of square deviations: 9417545878.0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,500 | INFO     | sum of deviations: -11626137589.500002
[2025-12-14 21:18:16] 2025-12-14 20:17:37,500 | INFO     | mean x: 1765733520.5
[2025-12-14 21:18:16] 2025-12-14 20:17:37,500 | INFO     | mean y: 2503459.407051282
[2025-12-14 21:18:16] 2025-12-14 20:17:37,500 | INFO     | intersect: 2182334714.9872875
[2025-12-14 21:18:16] 2025-12-14 20:17:37,501 | INFO     | chi2: 0.10027046760275034
[2025-12-14 21:18:16] 2025-12-14 20:17:37,501 | INFO     | current memory leak: -1.23 B/s (using 312 data points, chi2=0.10)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,502 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,502 | INFO     | ..............................
[2025-12-14 21:18:16] 2025-12-14 20:17:37,502 | INFO     | . Timing measurements:
[2025-12-14 21:18:16] 2025-12-14 20:17:37,502 | INFO     | . get job = 0 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | . initial setup = 2 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | . payload setup = 11 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | . stage-in = 0 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | . payload execution = 20627 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | . stage-out = 3 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | . log creation = 1 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,503 | INFO     | ..............................
[2025-12-14 21:18:16] 2025-12-14 20:17:37,634 | INFO     | 
[2025-12-14 21:18:16] 2025-12-14 20:17:37,634 | INFO     | job summary report
[2025-12-14 21:18:16] 2025-12-14 20:17:37,634 | INFO     | --------------------------------------------------
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | PanDA job id: 6929410330
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | task id: 47898836
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | errors: (none)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | pilot state: finished 
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | transexitcode: 0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | exeerrorcode: 0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | exeerrordiag: 
[2025-12-14 21:18:16] 2025-12-14 20:17:37,635 | INFO     | exitcode: 0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | exitmsg: OK
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | cpuconsumptiontime: 78753 s
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | nevents: 400
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | neventsw: 0
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | pid: 26977
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | pgrp: 26977
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | corecount: 8
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | event service: False
[2025-12-14 21:18:16] 2025-12-14 20:17:37,636 | INFO     | sizes: {0: 2283838, 1: 2284037, 2: 2284037, 12: 2284065, 21: 2284355, 23: 2284383, 20643: 2317532, 20647: 2326530, 20649: 2326586, 20673: 2326780}
[2025-12-14 21:18:16] 2025-12-14 20:17:37,637 | INFO     | --------------------------------------------------
[2025-12-14 21:18:16] 2025-12-14 20:17:37,637 | INFO     | 
[2025-12-14 21:18:16] 2025-12-14 20:17:37,637 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-12-14 21:18:16] 2025-12-14 20:17:37,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 21:18:16] 2025-12-14 20:17:37,684 | INFO     | job 6929410330 has completed (purged errors)
[2025-12-14 21:18:16] 2025-12-14 20:17:37,684 | INFO     | overall cleanup function is called
[2025-12-14 21:18:16] 2025-12-14 20:17:38,693 | INFO     | --- collectZombieJob: --- 10, [26977]
[2025-12-14 21:18:16] 2025-12-14 20:17:38,693 | INFO     | zombie collector waiting for pid 26977
[2025-12-14 21:18:16] 2025-12-14 20:17:38,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 21:18:16] 2025-12-14 20:17:38,693 | INFO     | collected zombie processes
[2025-12-14 21:18:16] 2025-12-14 20:17:38,693 | INFO     | will attempt to kill all subprocesses of pid=26977
[2025-12-14 21:18:16] 2025-12-14 20:17:38,822 | INFO     | process IDs to be killed: [26977] (in reverse order)
[2025-12-14 21:18:16] 2025-12-14 20:17:39,021 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 21:18:16] 2025-12-14 20:17:39,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 21:18:16] 2025-12-14 20:17:39,025 | INFO     | did not find any defunct processes belonging to 26977
[2025-12-14 21:18:16] 2025-12-14 20:17:39,029 | INFO     | did not find any defunct processes belonging to 26977
[2025-12-14 21:18:16] 2025-12-14 20:17:39,029 | INFO     | ready for new job
[2025-12-14 21:18:16] 2025-12-14 20:17:39,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 21:18:16] 2025-12-14 20:17:39,032 | INFO     | ***************************************
[2025-12-14 21:18:16] 2025-12-14 20:17:39,032 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 21:18:16] 2025-12-14 20:17:39,033 | INFO     | ***************************************
[2025-12-14 21:18:16] 2025-12-14 20:17:39,033 | INFO     | 
[2025-12-14 21:18:16] 2025-12-14 20:17:39,033 | INFO     | pilot is running in a VM
[2025-12-14 21:18:16] 2025-12-14 20:17:39,034 | INFO     | architecture information:
[2025-12-14 21:18:16] 2025-12-14 20:17:39,034 | INFO     | executing command: cat /etc/os-release
[2025-12-14 21:18:16] 2025-12-14 20:17:39,113 | INFO     | cat /etc/os-release:
[2025-12-14 21:18:16] NAME="CentOS Linux"
[2025-12-14 21:18:16] VERSION="7 (Core)"
[2025-12-14 21:18:16] ID="centos"
[2025-12-14 21:18:16] ID_LIKE="rhel fedora"
[2025-12-14 21:18:16] VERSION_ID="7"
[2025-12-14 21:18:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 21:18:16] ANSI_COLOR="0;31"
[2025-12-14 21:18:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 21:18:16] HOME_URL="https://www.centos.org/"
[2025-12-14 21:18:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 21:18:16] 
[2025-12-14 21:18:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 21:18:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 21:18:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 21:18:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 21:18:16] 
[2025-12-14 21:18:16] 2025-12-14 20:17:39,114 | INFO     | ***************************************
[2025-12-14 21:18:16] 2025-12-14 20:17:39,616 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-12-14 21:18:16] 2025-12-14 20:17:39,648 | INFO     | sufficient remaining disk space (496004759552 B)
[2025-12-14 21:18:16] 2025-12-14 20:17:39,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 21:18:16] 2025-12-14 20:17:39,649 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 21:18:16] 2025-12-14 20:17:39,649 | INFO     | update_server=False
[2025-12-14 21:18:16] 2025-12-14 20:17:39,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 21:18:16] 2025-12-14 20:17:39,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 21:18:16] 2025-12-14 20:17:39,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 21:18:16] 2025-12-14 20:17:39,696 | INFO     | aborting loop
[2025-12-14 21:18:16] 2025-12-14 20:17:39,794 | INFO     | all data control threads have been joined
[2025-12-14 21:18:16] 2025-12-14 20:17:40,271 | INFO     | all job control threads have been joined
[2025-12-14 21:18:16] 2025-12-14 20:17:40,655 | INFO     | [job] retrieve thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:40,680 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:40,702 | INFO     | [job] job monitor thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:40,751 | INFO     | [payload] validate_post thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:40,754 | INFO     | [job] validate thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:40,800 | INFO     | [data] control thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:40,953 | INFO     | [payload] failed_post thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:41,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:41,123 | INFO     | all payload control threads have been joined
[2025-12-14 21:18:16] 2025-12-14 20:17:41,277 | INFO     | [job] control thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:41,467 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:41,589 | INFO     | [data] copytool_in thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:41,610 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:41,656 | INFO     | [data] copytool_out thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:42,128 | INFO     | [payload] control thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:42,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 21:18:16] 2025-12-14 20:17:42,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 21:18:16] 2025-12-14 20:17:43,652 | INFO     | [job] queue monitor thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:17:45,907 [wrapper] supervise_pilot (15 min periods counter: 24)
[2025-12-14 21:18:16] 2025-12-14 20:17:46,568 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 21:18:16] 2025-12-14 20:18:08,703 | INFO     | [monitor] cgroup control has ended
[2025-12-14 21:18:16] 2025-12-14 20:18:09,930 | INFO     | PID=20365 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 21:18:16] 2025-12-14 20:18:09,930 | INFO     | .. there are 9 such processes running
[2025-12-14 21:18:16] 2025-12-14 20:18:09,931 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 21:18:16] 2025-12-14 20:18:09,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 21:18:16] 2025-12-14 20:18:09,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 21:18:16] 2025-12-14 20:18:10,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986968840000)>', '<ExcThread(monitor, started 139986397554432)>']
[2025-12-14 21:18:16] 2025-12-14 20:18:10,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 21:18:16] 2025-12-14 20:18:10,938 | INFO     | [monitor] control thread has ended
[2025-12-14 21:18:16] 2025-12-14 20:18:15,629 | INFO     | all workflow threads have been joined
[2025-12-14 21:18:16] 2025-12-14 20:18:15,629 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 21:18:16] 2025-12-14 20:18:15,629 | INFO     | traces error code: 0
[2025-12-14 21:18:16] 2025-12-14 20:18:15,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 21:18:16] 2025-12-14 20:18:15,799 [wrapper] ==== pilot stdout END ====
[2025-12-14 21:18:16] 2025-12-14 20:18:15,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 21:18:16] 2025-12-14 20:18:15,811 [wrapper] pilotpid: 20365
[2025-12-14 21:18:16] 2025-12-14 20:18:15,814 [wrapper] Pilot exit status: 0
[2025-12-14 21:18:16] 2025-12-14 20:18:15,846 [wrapper] pandaids: 6929410330
[2025-12-14 21:18:16] 2025-12-14 20:18:15,916 [wrapper] cleanup supervisor_pilot  9920 20366
[2025-12-14 21:18:16] 2025-12-14 20:18:15,939 [wrapper] Test setup, not cleaning
[2025-12-14 21:18:16] 2025-12-14 20:18:15,947 [wrapper] apfmon messages muted
[2025-12-14 21:18:16] 2025-12-14 20:18:15,951 [wrapper] ==== wrapper stdout END ====
[2025-12-14 21:18:16] 2025-12-14 20:18:15,954 [wrapper] ==== wrapper stderr END ====
[2025-12-14 21:18:16]  *** Error codes and diagnostics ***
[2025-12-14 21:18:16]     "exeErrorCode": 0,
[2025-12-14 21:18:16]     "exeErrorDiag": "",
[2025-12-14 21:18:16]     "pilotErrorCode": 0,
[2025-12-14 21:18:16]     "pilotErrorDiag": "",
[2025-12-14 21:18:16]  *** Listing of results directory ***
[2025-12-14 21:18:16] total 413364
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc    579449 Dec 14 05:46 pilot3.tar.gz
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc      5112 Dec 14 05:46 queuedata.json
[2025-12-14 21:18:16] -rwx------. 1 boinc boinc     36322 Dec 14 05:46 runpilot2-wrapper.sh
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc       100 Dec 14 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 21:18:16] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 15:29 run_atlas
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc       105 Dec 14 15:29 job.xml
[2025-12-14 21:18:16] -rw-r--r--. 2 boinc boinc 214899454 Dec 14 15:29 EVNT.47898833._000107.pool.root.1
[2025-12-14 21:18:16] -rw-r--r--. 2 boinc boinc     15847 Dec 14 15:29 start_atlas.sh
[2025-12-14 21:18:16] drwxrwx--x. 2 boinc boinc        68 Dec 14 15:29 shared
[2025-12-14 21:18:16] -rw-r--r--. 2 boinc boinc    592394 Dec 14 15:29 input.tar.gz
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc      6392 Dec 14 15:29 init_data.xml
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc         0 Dec 14 15:29 boinc_lockfile
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc      2551 Dec 14 15:29 pandaJob.out
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc    991024 Dec 14 15:32 agis_schedconf.cvmfs.json
[2025-12-14 21:18:16] drwx------. 5 boinc boinc      4096 Dec 14 15:32 pilot3
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc 197866596 Dec 14 21:16 HITS.47898836._002668.pool.root.1
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc       531 Dec 14 21:16 boinc_task_state.xml
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc      1019 Dec 14 21:17 memory_monitor_summary.json
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc   1516240 Dec 14 21:17 agis_ddmendpoints.agis.ALL.json
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc    544669 Dec 14 21:17 log.47898836._002668.job.log.tgz.1
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc      7770 Dec 14 21:17 heartbeat.json
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc        95 Dec 14 21:18 pilot_heartbeat.json
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc      8192 Dec 14 21:18 boinc_mmap_file
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc        28 Dec 14 21:18 wrapper_checkpoint.txt
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc      4884 Dec 14 21:18 pilotlog.txt
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc   2767411 Dec 14 21:18 log.47898836._002668.job.log.1
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc       357 Dec 14 21:18 output.list
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc       620 Dec 14 21:18 runtime_log
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc   3328000 Dec 14 21:18 result.tar.gz
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc       658 Dec 14 21:18 VdGKDm4Ato8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpmUKDmKwF31n.diag
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc      8817 Dec 14 21:18 runtime_log.err
[2025-12-14 21:18:16] -rw-r--r--. 1 boinc boinc     20993 Dec 14 21:18 stderr.txt
[2025-12-14 21:18:16] HITS file was successfully produced:
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc 197866596 Dec 14 21:16 shared/HITS.pool.root.1
[2025-12-14 21:18:16]  *** Contents of shared directory: ***
[2025-12-14 21:18:16] total 406944
[2025-12-14 21:18:16] -rw-r--r--. 2 boinc boinc 214899454 Dec 14 15:29 ATLAS.root_0
[2025-12-14 21:18:16] -rw-r--r--. 2 boinc boinc     15847 Dec 14 15:29 start_atlas.sh
[2025-12-14 21:18:16] -rw-r--r--. 2 boinc boinc    592394 Dec 14 15:29 input.tar.gz
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc 197866596 Dec 14 21:16 HITS.pool.root.1
[2025-12-14 21:18:16] -rw-------. 1 boinc boinc   3328000 Dec 14 21:18 result.tar.gz
21:18:18 (16603): run_atlas exited; CPU time 79040.176708
21:18:18 (16603): called boinc_finish(0)

</stderr_txt>
]]>

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