Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:04:18 (3559): wrapper (7.7.26015): starting
15:04:18 (3559): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 15:04:18] Arguments: --nthreads 8
[2025-12-14 15:04:18] Threads: 8
[2025-12-14 15:04:18] Checking for CVMFS
[2025-12-14 15:04:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 15:04:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 15:04:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 15:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 15:04:21] 2.11.2.0 16850 311336 140276 153997 0 61 23792599 25165824 4064 130560 11 146929096 99.877 86042724 2938 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 15:04:21] CVMFS is ok
[2025-12-14 15:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 15:04:21] Checking for apptainer binary...
[2025-12-14 15:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 15:04:21] Running /usr/bin/apptainer --version
[2025-12-14 15:04:21] apptainer version 1.3.2-1.el7
[2025-12-14 15:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 15:04:24] cg-vwn401.simple-grid.lan
[2025-12-14 15:04:24] apptainer works
[2025-12-14 15:04:24] Set ATHENA_PROC_NUMBER=8
[2025-12-14 15:04:24] Set ATHENA_CORE_NUMBER=8
[2025-12-14 15:04:24] Starting ATLAS job with PandaID=6929526536
[2025-12-14 15:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 19:13:01]  *** The last 200 lines of the pilot log: ***
[2025-12-14 19:13:02] 2025-12-14 18:12:24,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,650 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 19:13:02] 2025-12-14 18:12:24,651 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 19:13:02] 2025-12-14 18:12:24,653 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6929526536/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,654 | INFO     | extracted standard info from prmon json
[2025-12-14 19:13:02] 2025-12-14 18:12:24,654 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 19:13:02] 2025-12-14 18:12:24,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 19:13:02] 2025-12-14 18:12:24,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 19:13:02] 2025-12-14 18:12:24,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 19:13:02] 2025-12-14 18:12:24,660 | INFO     | fitting pss+swap vs Time
[2025-12-14 19:13:02] 2025-12-14 18:12:24,660 | INFO     | sum of square deviations: 3822136780.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,663 | INFO     | sum of deviations: 40893380080.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,663 | INFO     | mean x: 1765728816.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,663 | INFO     | mean y: 2462447.108225108
[2025-12-14 19:13:02] 2025-12-14 18:12:24,663 | INFO     | intersect: -18889226612.45923
[2025-12-14 19:13:02] 2025-12-14 18:12:24,663 | INFO     | chi2: 6.283804138582566
[2025-12-14 19:13:02] 2025-12-14 18:12:24,664 | INFO     | sum of square deviations: 3579276412.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,666 | INFO     | sum of deviations: 55157688125.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,666 | INFO     | mean x: 1765728663.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,666 | INFO     | mean y: 2471236.146017699
[2025-12-14 19:13:02] 2025-12-14 18:12:24,666 | INFO     | intersect: -27207919834.926067
[2025-12-14 19:13:02] 2025-12-14 18:12:24,667 | INFO     | chi2: 5.569915572085237
[2025-12-14 19:13:02] 2025-12-14 18:12:24,667 | INFO     | current chi2=5.569915572085237 (change=11.360770494326076 %)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,667 | INFO     | right removable region: 225
[2025-12-14 19:13:02] 2025-12-14 18:12:24,668 | INFO     | sum of square deviations: 3579276412.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,670 | INFO     | sum of deviations: -36251713393.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,670 | INFO     | mean x: 1765728968.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,670 | INFO     | mean y: 2510839.7477876106
[2025-12-14 19:13:02] 2025-12-14 18:12:24,670 | INFO     | intersect: 17886209420.029587
[2025-12-14 19:13:02] 2025-12-14 18:12:24,671 | INFO     | chi2: 1.873543133115758
[2025-12-14 19:13:02] 2025-12-14 18:12:24,671 | INFO     | current chi2=1.873543133115758 (change=70.18457145072043 %)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,671 | INFO     | sum of square deviations: 3346927870.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,673 | INFO     | sum of deviations: -64965666974.000015
[2025-12-14 19:13:02] 2025-12-14 18:12:24,674 | INFO     | mean x: 1765729121.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,674 | INFO     | mean y: 2529535.6470588236
[2025-12-14 19:13:02] 2025-12-14 18:12:24,674 | INFO     | intersect: 34276279821.511383
[2025-12-14 19:13:02] 2025-12-14 18:12:24,674 | INFO     | chi2: 0.9933107687825536
[2025-12-14 19:13:02] 2025-12-14 18:12:24,675 | INFO     | current chi2=0.9933107687825536 (change=46.98223108796816 %)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,675 | INFO     | sum of square deviations: 3124858590.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,677 | INFO     | sum of deviations: -59481943355.50001
[2025-12-14 19:13:02] 2025-12-14 18:12:24,677 | INFO     | mean x: 1765729273.5
[2025-12-14 19:13:02] 2025-12-14 18:12:24,677 | INFO     | mean y: 2525762.902777778
[2025-12-14 19:13:02] 2025-12-14 18:12:24,677 | INFO     | intersect: 33613329452.89477
[2025-12-14 19:13:02] 2025-12-14 18:12:24,678 | INFO     | chi2: 0.9909916728607645
[2025-12-14 19:13:02] 2025-12-14 18:12:24,678 | INFO     | current chi2=0.9909916728607645 (change=0.2334713359275795 %)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,678 | INFO     | left removable region: 30
[2025-12-14 19:13:02] 2025-12-14 18:12:24,678 | INFO     | sum of square deviations: 2299168690.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,680 | INFO     | sum of deviations: -23663409505.999992
[2025-12-14 19:13:02] 2025-12-14 18:12:24,680 | INFO     | mean x: 1765729548.0
[2025-12-14 19:13:02] 2025-12-14 18:12:24,680 | INFO     | mean y: 2520636.123076923
[2025-12-14 19:13:02] 2025-12-14 18:12:24,680 | INFO     | intersect: 18175689726.716545
[2025-12-14 19:13:02] 2025-12-14 18:12:24,680 | INFO     | chi2: 0.15826197267166417
[2025-12-14 19:13:02] 2025-12-14 18:12:24,681 | INFO     | current memory leak: -10.29 B/s (using 195 data points, chi2=0.16)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,681 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | ..............................
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . Timing measurements:
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . get job = 0 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . initial setup = 10 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . payload setup = 137 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . stage-in = 0 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . payload execution = 14215 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,682 | INFO     | . stage-out = 3 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,683 | INFO     | . log creation = 1 s
[2025-12-14 19:13:02] 2025-12-14 18:12:24,683 | INFO     | ..............................
[2025-12-14 19:13:02] 2025-12-14 18:12:25,285 | INFO     | 
[2025-12-14 19:13:02] 2025-12-14 18:12:25,285 | INFO     | job summary report
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | --------------------------------------------------
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | PanDA job id: 6929526536
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | task id: 47899042
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | errors: (none)
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | pilot state: finished 
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | transexitcode: 0
[2025-12-14 19:13:02] 2025-12-14 18:12:25,286 | INFO     | exeerrorcode: 0
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | exeerrordiag: 
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | exitcode: 0
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | exitmsg: OK
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | cpuconsumptiontime: 53062 s
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | nevents: 400
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | neventsw: 0
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | pid: 13894
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | pgrp: 13894
[2025-12-14 19:13:02] 2025-12-14 18:12:25,287 | INFO     | corecount: 8
[2025-12-14 19:13:02] 2025-12-14 18:12:25,288 | INFO     | event service: False
[2025-12-14 19:13:02] 2025-12-14 18:12:25,288 | INFO     | sizes: {0: 2283709, 1: 2283964, 2: 2283964, 12: 2283992, 23: 2284020, 34: 2284048, 45: 2284204, 55: 2284232, 66: 2284260, 77: 2284288, 87: 2284344, 94: 2284914, 98
[2025-12-14 19:13:02] 2025-12-14 18:12:25,288 | INFO     | --------------------------------------------------
[2025-12-14 19:13:02] 2025-12-14 18:12:25,288 | INFO     | 
[2025-12-14 19:13:02] 2025-12-14 18:12:25,288 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-14 19:13:02] 2025-12-14 18:12:25,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 19:13:02] 2025-12-14 18:12:25,682 | INFO     | job 6929526536 has completed (purged errors)
[2025-12-14 19:13:02] 2025-12-14 18:12:25,683 | INFO     | overall cleanup function is called
[2025-12-14 19:13:02] 2025-12-14 18:12:26,691 | INFO     | --- collectZombieJob: --- 10, [13894]
[2025-12-14 19:13:02] 2025-12-14 18:12:26,691 | INFO     | zombie collector waiting for pid 13894
[2025-12-14 19:13:02] 2025-12-14 18:12:26,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 19:13:02] 2025-12-14 18:12:26,692 | INFO     | collected zombie processes
[2025-12-14 19:13:02] 2025-12-14 18:12:26,692 | INFO     | will attempt to kill all subprocesses of pid=13894
[2025-12-14 19:13:02] 2025-12-14 18:12:26,808 | INFO     | process IDs to be killed: [13894] (in reverse order)
[2025-12-14 19:13:02] 2025-12-14 18:12:27,254 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 19:13:02] 2025-12-14 18:12:27,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 19:13:02] 2025-12-14 18:12:27,258 | INFO     | did not find any defunct processes belonging to 13894
[2025-12-14 19:13:02] 2025-12-14 18:12:27,260 | INFO     | did not find any defunct processes belonging to 13894
[2025-12-14 19:13:02] 2025-12-14 18:12:27,261 | INFO     | ready for new job
[2025-12-14 19:13:02] 2025-12-14 18:12:27,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 19:13:02] 2025-12-14 18:12:27,263 | INFO     | ***************************************
[2025-12-14 19:13:02] 2025-12-14 18:12:27,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 19:13:02] 2025-12-14 18:12:27,263 | INFO     | ***************************************
[2025-12-14 19:13:02] 2025-12-14 18:12:27,263 | INFO     | 
[2025-12-14 19:13:02] 2025-12-14 18:12:27,270 | INFO     | pilot is running in a VM
[2025-12-14 19:13:02] 2025-12-14 18:12:27,271 | INFO     | architecture information:
[2025-12-14 19:13:02] 2025-12-14 18:12:27,283 | INFO     | executing command: cat /etc/os-release
[2025-12-14 19:13:02] 2025-12-14 18:12:27,515 | INFO     | cat /etc/os-release:
[2025-12-14 19:13:02] NAME="CentOS Linux"
[2025-12-14 19:13:02] VERSION="7 (Core)"
[2025-12-14 19:13:02] ID="centos"
[2025-12-14 19:13:02] ID_LIKE="rhel fedora"
[2025-12-14 19:13:02] VERSION_ID="7"
[2025-12-14 19:13:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 19:13:02] ANSI_COLOR="0;31"
[2025-12-14 19:13:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 19:13:02] HOME_URL="https://www.centos.org/"
[2025-12-14 19:13:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 19:13:02] 
[2025-12-14 19:13:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 19:13:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 19:13:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 19:13:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 19:13:02] 
[2025-12-14 19:13:02] 2025-12-14 18:12:27,515 | INFO     | ***************************************
[2025-12-14 19:13:02] 2025-12-14 18:12:28,018 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-14 19:13:02] 2025-12-14 18:12:28,185 | INFO     | sufficient remaining disk space (497219010560 B)
[2025-12-14 19:13:02] 2025-12-14 18:12:28,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 19:13:02] 2025-12-14 18:12:28,191 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 19:13:02] 2025-12-14 18:12:28,192 | INFO     | update_server=False
[2025-12-14 19:13:02] 2025-12-14 18:12:28,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 19:13:02] 2025-12-14 18:12:28,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 19:13:02] 2025-12-14 18:12:28,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 19:13:02] 2025-12-14 18:12:28,193 | INFO     | aborting loop
[2025-12-14 19:13:02] 2025-12-14 18:12:28,263 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 19:13:02] 2025-12-14 18:12:28,789 | INFO     | all payload control threads have been joined
[2025-12-14 19:13:02] 2025-12-14 18:12:28,947 | INFO     | all job control threads have been joined
[2025-12-14 19:13:02] 2025-12-14 18:12:28,994 | INFO     | all data control threads have been joined
[2025-12-14 19:13:02] 2025-12-14 18:12:29,197 | INFO     | [job] retrieve thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,198 | INFO     | [job] job monitor thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,379 | INFO     | [payload] validate_post thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,386 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,595 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,710 | INFO     | [payload] failed_post thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,795 | INFO     | [payload] control thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:29,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 19:13:02] 2025-12-14 18:12:29,953 | INFO     | [job] control thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:30,000 | INFO     | [data] control thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:30,199 | INFO     | [data] copytool_out thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:30,376 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:30,381 | INFO     | [data] copytool_in thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:30,513 | INFO     | [job] validate thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:30,842 | INFO     | [job] queue monitor thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:32,273 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 19:13:02] 2025-12-14 18:12:43,580 | INFO     | [monitor] cgroup control has ended
[2025-12-14 19:13:02] 2025-12-14 18:12:44,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374658631488)>', '<ExcThread(monitor, started 140374068676352)>']
[2025-12-14 19:13:02] 2025-12-14 18:12:49,518 | INFO     | all workflow threads have been joined
[2025-12-14 19:13:02] 2025-12-14 18:12:49,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 19:13:02] 2025-12-14 18:12:49,519 | INFO     | traces error code: 0
[2025-12-14 19:13:02] 2025-12-14 18:12:49,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 19:13:02] 2025-12-14 18:12:56,960 | INFO     | PID=7358 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-14 19:13:02] 2025-12-14 18:12:56,961 | INFO     | .. there are 9 such processes running
[2025-12-14 19:13:02] 2025-12-14 18:12:56,962 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 19:13:02] 2025-12-14 18:12:56,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 19:13:02] 2025-12-14 18:12:56,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 19:13:02] 2025-12-14 18:12:56,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 19:13:02] 2025-12-14 18:12:56,963 | INFO     | [monitor] control thread has ended
[2025-12-14 19:13:02] 2025-12-14 18:12:57,409 [wrapper] ==== pilot stdout END ====
[2025-12-14 19:13:02] 2025-12-14 18:12:57,495 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 19:13:02] 2025-12-14 18:12:57,610 [wrapper] pilotpid: 7358
[2025-12-14 19:13:02] 2025-12-14 18:12:57,768 [wrapper] Pilot exit status: 0
[2025-12-14 19:13:02] 2025-12-14 18:12:58,229 [wrapper] pandaids: 6929526536
[2025-12-14 19:13:02] 2025-12-14 18:12:59,045 [wrapper] cleanup supervisor_pilot 24727 7359
[2025-12-14 19:13:02] 2025-12-14 18:12:59,174 [wrapper] Test setup, not cleaning
[2025-12-14 19:13:02] 2025-12-14 18:12:59,234 [wrapper] apfmon messages muted
[2025-12-14 19:13:02] 2025-12-14 18:12:59,293 [wrapper] ==== wrapper stdout END ====
[2025-12-14 19:13:02] 2025-12-14 18:12:59,340 [wrapper] ==== wrapper stderr END ====
[2025-12-14 19:13:02]  *** Error codes and diagnostics ***
[2025-12-14 19:13:02]     "exeErrorCode": 0,
[2025-12-14 19:13:02]     "exeErrorDiag": "",
[2025-12-14 19:13:02]     "pilotErrorCode": 0,
[2025-12-14 19:13:02]     "pilotErrorDiag": "",
[2025-12-14 19:13:02]  *** Listing of results directory ***
[2025-12-14 19:13:02] total 366500
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc    579449 Dec 13 22:19 pilot3.tar.gz
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc      5112 Dec 13 22:19 queuedata.json
[2025-12-14 19:13:02] -rwx------. 1 boinc boinc     36322 Dec 13 22:19 runpilot2-wrapper.sh
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc       100 Dec 14 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 19:13:02] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 15:04 run_atlas
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc       105 Dec 14 15:04 job.xml
[2025-12-14 19:13:02] -rw-r--r--. 2 boinc boinc 195592554 Dec 14 15:04 EVNT.47899040._000065.pool.root.1
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc      6393 Dec 14 15:04 init_data.xml
[2025-12-14 19:13:02] -rw-r--r--. 2 boinc boinc     15847 Dec 14 15:04 start_atlas.sh
[2025-12-14 19:13:02] drwxrwx--x. 2 boinc boinc        68 Dec 14 15:04 shared
[2025-12-14 19:13:02] -rw-r--r--. 2 boinc boinc    592386 Dec 14 15:04 input.tar.gz
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc         0 Dec 14 15:04 boinc_lockfile
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc      2492 Dec 14 15:04 pandaJob.out
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc    991736 Dec 14 15:08 agis_schedconf.cvmfs.json
[2025-12-14 19:13:02] drwx------. 5 boinc boinc      4096 Dec 14 15:08 pilot3
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc 170950115 Dec 14 19:09 HITS.47899042._001125.pool.root.1
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc       531 Dec 14 19:09 boinc_task_state.xml
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc      1016 Dec 14 19:10 memory_monitor_summary.json
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc   1516240 Dec 14 19:10 agis_ddmendpoints.agis.ALL.json
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc    472555 Dec 14 19:10 log.47899042._001125.job.log.tgz.1
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc      7788 Dec 14 19:12 heartbeat.json
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc        28 Dec 14 19:12 wrapper_checkpoint.txt
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc      8192 Dec 14 19:12 boinc_mmap_file
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc        95 Dec 14 19:12 pilot_heartbeat.json
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc       819 Dec 14 19:12 pilotlog.txt
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc   1951255 Dec 14 19:12 log.47899042._001125.job.log.1
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc       357 Dec 14 19:13 output.list
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc       620 Dec 14 19:13 runtime_log
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc   2447360 Dec 14 19:13 result.tar.gz
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc       657 Dec 14 19:13 X5JKDmcCmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUGUKDmJBD8Co.diag
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc      8833 Dec 14 19:13 runtime_log.err
[2025-12-14 19:13:02] -rw-r--r--. 1 boinc boinc     20794 Dec 14 19:13 stderr.txt
[2025-12-14 19:13:02] HITS file was successfully produced:
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc 170950115 Dec 14 19:09 shared/HITS.pool.root.1
[2025-12-14 19:13:02]  *** Contents of shared directory: ***
[2025-12-14 19:13:02] total 360944
[2025-12-14 19:13:02] -rw-r--r--. 2 boinc boinc 195592554 Dec 14 15:04 ATLAS.root_0
[2025-12-14 19:13:02] -rw-r--r--. 2 boinc boinc     15847 Dec 14 15:04 start_atlas.sh
[2025-12-14 19:13:02] -rw-r--r--. 2 boinc boinc    592386 Dec 14 15:04 input.tar.gz
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc 170950115 Dec 14 19:09 HITS.pool.root.1
[2025-12-14 19:13:02] -rw-------. 1 boinc boinc   2447360 Dec 14 19:13 result.tar.gz
19:13:03 (3559): run_atlas exited; CPU time 53269.428090
19:13:03 (3559): called boinc_finish(0)

</stderr_txt>
]]>

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