Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:24 (446051): wrapper (7.7.26015): starting
01:53:24 (446051): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 01:53:24] Arguments: --nthreads 8
[2025-12-14 01:53:24] Threads: 8
[2025-12-14 01:53:24] Checking for CVMFS
[2025-12-14 01:53:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 01:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 01:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 01:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 01:53:24] 2.11.3.0 253229 19059 236708 153990 2 616 37653235 45568001 11581 130560 0 70090446 99.791 37688568 18369 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-14 01:53:24] CVMFS is ok
[2025-12-14 01:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 01:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 01:53:24] Further information can be found at the LHC@home message board.
[2025-12-14 01:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 01:53:24] Checking for apptainer binary...
[2025-12-14 01:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 01:53:24] Running /usr/bin/apptainer --version
[2025-12-14 01:53:24] apptainer version 1.4.1-1.el9
[2025-12-14 01:53:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 01:53:25] wns0023.triumf.lcg
[2025-12-14 01:53:25] apptainer works
[2025-12-14 01:53:25] Set ATHENA_PROC_NUMBER=8
[2025-12-14 01:53:25] Set ATHENA_CORE_NUMBER=8
[2025-12-14 01:53:25] Starting ATLAS job with PandaID=6926683028
[2025-12-14 01:53:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 02:00:01]  *** The last 200 lines of the pilot log: ***
[2025-12-14 02:00:01] 2025-12-14 09:59:20,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 02:00:01] 2025-12-14 09:59:20,997 | WARNING  | wrong length of table data, x=[1765706118.0, 1765706179.0], y=[865.0, 813953.0] (must be same and length>=4)
[2025-12-14 02:00:01] 2025-12-14 09:59:20,997 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | ..............................
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . Timing measurements:
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . get job = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . initial setup = 3 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . payload setup = 29 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . stage-in = 1 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . payload execution = 125 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . stage-out = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . log creation = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | ..............................
[2025-12-14 02:00:01] 2025-12-14 09:59:20,999 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 02:00:01] 2025-12-14 09:59:20,999 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6926683028/pilotlog.txt
[2025-12-14 02:00:01] 2025-12-14 09:59:21,135 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-14 02:00:01] - Log from pilotlog.txt -
[2025-12-14 02:00:01] 2025-12-14 09:59:20,994 | INFO     | extracted standard info from prmon json
[2025-12-14 02:00:01] 2025-12-14 09:59:20,995 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 02:00:01] 2025-12-14 09:59:20,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 02:00:01] 2025-12-14 09:59:20,996 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 02:00:01] 2025-12-14 09:59:20,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 02:00:01] 2025-12-14 09:59:20,997 | WARNING  | wrong length of table data, x=[1765706118.0, 1765706179.0], y=[865.0, 813953.0] (must be same and length>=4)
[2025-12-14 02:00:01] 2025-12-14 09:59:20,997 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | ..............................
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . Timing measurements:
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . get job = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . initial setup = 3 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . payload setup = 29 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . stage-in = 1 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . payload execution = 125 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . stage-out = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . log creation = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | ..............................
[2025-12-14 02:00:01] 2025-12-14 09:59:20,999 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 02:00:01] 2025-12-14 09:59:20,999 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6926683028/pilotlog.txt
[2025-12-14 02:00:01] 2025-12-14 09:59:21,135 | WARNING  | 
[2025-12-14 02:00:01] [begin log extracts]
[2025-12-14 02:00:01] - Log from pilotlog.txt -
[2025-12-14 02:00:01] 2025-12-14 09:59:20,994 | INFO     | extracted standard info from prmon json
[2025-12-14 02:00:01] 2025-12-14 09:59:20,995 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 02:00:01] 2025-12-14 09:59:20,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 02:00:01] 2025-12-14 09:59:20,996 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 02:00:01] 2025-12-14 09:59:20,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 02:00:01] 2025-12-14 09:59:20,997 | WARNING  | wrong length of table data, x=[1765706118.0, 1765706179.0], y=[865.0, 813953.0] (must be same and length>=4)
[2025-12-14 02:00:01] 2025-12-14 09:59:20,997 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | ..............................
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . Timing measurements:
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . get job = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . initial setup = 3 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . payload setup = 29 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . stage-in = 1 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . payload execution = 125 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . stage-out = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | . log creation = 0 s
[2025-12-14 02:00:01] 2025-12-14 09:59:20,998 | INFO     | ..............................
[2025-12-14 02:00:01] 2025-12-14 09:59:20,999 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-14 02:00:01] 2025-12-14 09:59:20,999 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6926683028/pilotlog.txt
[2025-12-14 02:00:01] [end log extracts]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,135 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-14 02:00:01] 2025-12-14 09:59:21,136 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-14 02:00:01] 2025-12-14 09:59:21,240 | INFO     | 
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | job summary report
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | --------------------------------------------------
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | PanDA job id: 6926683028
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | task id: 47866709
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-14 01:57:04,971 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 02:00:01] 2025-12-14 09:59:21,244 | INFO     | pilot state: failed 
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | transexitcode: 65
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | exeerrorcode: 65
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | exitcode: 65
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | cpuconsumptiontime: 68 s
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | nevents: 0
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | neventsw: 0
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | pid: 457132
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | pgrp: 457132
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | corecount: 8
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | event service: False
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | sizes: {0: 2284381, 1: 2284580, 12: 2284580, 14: 2284870, 23: 2284898, 158: 2308676, 159: 2312966, 162: 2312994, 287: 2313160}
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | --------------------------------------------------
[2025-12-14 02:00:01] 2025-12-14 09:59:21,245 | INFO     | 
[2025-12-14 02:00:01] 2025-12-14 09:59:21,246 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-14 02:00:01] 2025-12-14 09:59:21,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 02:00:01] 2025-12-14 09:59:21,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 02:00:01] 2025-12-14 09:59:21,268 | INFO     | job 6926683028 has completed (purged errors)
[2025-12-14 02:00:01] 2025-12-14 09:59:21,268 | INFO     | overall cleanup function is called
[2025-12-14 02:00:01] 2025-12-14 09:59:22,280 | INFO     | --- collectZombieJob: --- 10, [457132]
[2025-12-14 02:00:01] 2025-12-14 09:59:22,280 | INFO     | zombie collector waiting for pid 457132
[2025-12-14 02:00:01] 2025-12-14 09:59:22,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 02:00:01] 2025-12-14 09:59:22,280 | INFO     | collected zombie processes
[2025-12-14 02:00:01] 2025-12-14 09:59:22,280 | INFO     | will attempt to kill all subprocesses of pid=457132
[2025-12-14 02:00:01] 2025-12-14 09:59:22,645 | INFO     | process IDs to be killed: [457132] (in reverse order)
[2025-12-14 02:00:01] 2025-12-14 09:59:22,784 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 02:00:01] 2025-12-14 09:59:22,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 02:00:01] 2025-12-14 09:59:22,791 | INFO     | did not find any defunct processes belonging to 457132
[2025-12-14 02:00:01] 2025-12-14 09:59:22,797 | INFO     | did not find any defunct processes belonging to 457132
[2025-12-14 02:00:01] 2025-12-14 09:59:22,798 | INFO     | ready for new job
[2025-12-14 02:00:01] 2025-12-14 09:59:22,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 02:00:01] 2025-12-14 09:59:22,828 | INFO     | ***************************************
[2025-12-14 02:00:01] 2025-12-14 09:59:22,828 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 02:00:01] 2025-12-14 09:59:22,829 | INFO     | ***************************************
[2025-12-14 02:00:01] 2025-12-14 09:59:22,829 | INFO     | 
[2025-12-14 02:00:01] 2025-12-14 09:59:22,830 | INFO     | architecture information:
[2025-12-14 02:00:01] 2025-12-14 09:59:22,868 | INFO     | executing command: cat /etc/os-release
[2025-12-14 02:00:01] 2025-12-14 09:59:22,889 | INFO     | cat /etc/os-release:
[2025-12-14 02:00:01] NAME="CentOS Linux"
[2025-12-14 02:00:01] VERSION="7 (Core)"
[2025-12-14 02:00:01] ID="centos"
[2025-12-14 02:00:01] ID_LIKE="rhel fedora"
[2025-12-14 02:00:01] VERSION_ID="7"
[2025-12-14 02:00:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 02:00:01] ANSI_COLOR="0;31"
[2025-12-14 02:00:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 02:00:01] HOME_URL="https://www.centos.org/"
[2025-12-14 02:00:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 02:00:01] 
[2025-12-14 02:00:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 02:00:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 02:00:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 02:00:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 02:00:01] 
[2025-12-14 02:00:01] 2025-12-14 09:59:22,890 | INFO     | ***************************************
[2025-12-14 02:00:01] 2025-12-14 09:59:23,393 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-14 02:00:01] 2025-12-14 09:59:23,423 | INFO     | sufficient remaining disk space (1277511598080 B)
[2025-12-14 02:00:01] 2025-12-14 09:59:23,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 02:00:01] 2025-12-14 09:59:23,424 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 02:00:01] 2025-12-14 09:59:23,424 | INFO     | update_server=False
[2025-12-14 02:00:01] 2025-12-14 09:59:23,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 02:00:01] 2025-12-14 09:59:23,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 02:00:01] 2025-12-14 09:59:23,425 | INFO     | aborting loop
[2025-12-14 02:00:01] 2025-12-14 09:59:23,792 | INFO     | all data control threads have been joined
[2025-12-14 02:00:01] 2025-12-14 09:59:24,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 02:00:01] 2025-12-14 09:59:24,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 02:00:01] 2025-12-14 09:59:24,431 | INFO     | [job] job monitor thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:24,436 | INFO     | [job] retrieve thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:24,448 | INFO     | all payload control threads have been joined
[2025-12-14 02:00:01] 2025-12-14 09:59:24,484 | INFO     | [payload] validate_post thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:24,631 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:24,798 | INFO     | [data] control thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:24,869 | INFO     | [job] validate thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:24,981 | INFO     | all job control threads have been joined
[2025-12-14 02:00:01] 2025-12-14 09:59:25,455 | INFO     | [payload] control thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:25,501 | INFO     | [data] copytool_in thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:25,517 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:25,523 | INFO     | [payload] failed_post thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:25,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:25,752 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:25,988 | INFO     | [job] control thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:26,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 02:00:01] 2025-12-14 09:59:26,280 | INFO     | [data] copytool_out thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:27,222 | INFO     | [job] queue monitor thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:28,256 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 02:00:01] 2025-12-14 09:59:53,495 | INFO     | PID=449755 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 02:00:01] 2025-12-14 09:59:53,495 | INFO     | .. there are 26 such processes running
[2025-12-14 02:00:01] 2025-12-14 09:59:53,495 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 02:00:01] 2025-12-14 09:59:53,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 02:00:01] 2025-12-14 09:59:53,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 02:00:01] 2025-12-14 09:59:55,323 | INFO     | [monitor] cgroup control has ended
[2025-12-14 02:00:01] 2025-12-14 09:59:56,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621668697920)>', '<ExcThread(monitor, started 140621339657984)>']
[2025-12-14 02:00:01] 2025-12-14 09:59:56,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 02:00:01] 2025-12-14 09:59:56,508 | INFO     | [monitor] control thread has ended
[2025-12-14 02:00:01] 2025-12-14 10:00:01,446 | INFO     | all workflow threads have been joined
[2025-12-14 02:00:01] 2025-12-14 10:00:01,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 02:00:01] 2025-12-14 10:00:01,446 | INFO     | traces error code: 0
[2025-12-14 02:00:01] 2025-12-14 10:00:01,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 02:00:01] 2025-12-14 10:00:01,527 [wrapper] ==== pilot stdout END ====
[2025-12-14 02:00:01] 2025-12-14 10:00:01,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 02:00:01] 2025-12-14 10:00:01,531 [wrapper] pilotpid: 449755
[2025-12-14 02:00:01] 2025-12-14 10:00:01,534 [wrapper] Pilot exit status: 0
[2025-12-14 02:00:01] 2025-12-14 10:00:01,544 [wrapper] pandaids: 6926683028
[2025-12-14 02:00:01] 2025-12-14 10:00:01,583 [wrapper] cleanup supervisor_pilot  449761 449756
[2025-12-14 02:00:01] 2025-12-14 10:00:01,585 [wrapper] Test setup, not cleaning
[2025-12-14 02:00:01] 2025-12-14 10:00:01,586 [wrapper] apfmon messages muted
[2025-12-14 02:00:01] 2025-12-14 10:00:01,588 [wrapper] ==== wrapper stdout END ====
[2025-12-14 02:00:01] 2025-12-14 10:00:01,590 [wrapper] ==== wrapper stderr END ====
[2025-12-14 02:00:01]  *** Error codes and diagnostics ***
[2025-12-14 02:00:01]     "exeErrorCode": 65,
[2025-12-14 02:00:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-14 02:00:01]     "pilotErrorCode": 1305,
[2025-12-14 02:00:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-14 02:00:01]  *** Listing of results directory ***
[2025-12-14 02:00:01] total 323180
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc    579449 Dec 11 02:23 pilot3.tar.gz
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc      5112 Dec 11 02:38 queuedata.json
[2025-12-14 02:00:01] -rwx------. 1 boinc boinc     36292 Dec 11 02:40 runpilot2-wrapper.sh
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc       100 Dec 14 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 02:00:01] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 01:53 run_atlas
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc       105 Dec 14 01:53 job.xml
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc      6446 Dec 14 01:53 init_data.xml
[2025-12-14 02:00:01] -rw-r--r--. 2 boinc boinc 326707806 Dec 14 01:53 EVNT.47866705._000004.pool.root.1
[2025-12-14 02:00:01] -rw-r--r--. 2 boinc boinc     15847 Dec 14 01:53 start_atlas.sh
[2025-12-14 02:00:01] drwxrwx--x. 2 boinc boinc      4096 Dec 14 01:53 shared
[2025-12-14 02:00:01] -rw-r--r--. 2 boinc boinc    592580 Dec 14 01:53 input.tar.gz
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc         0 Dec 14 01:53 boinc_lockfile
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc      2845 Dec 14 01:53 pandaJob.out
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc    991736 Dec 14 01:53 agis_schedconf.cvmfs.json
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc   1516240 Dec 14 01:53 agis_ddmendpoints.agis.ALL.json
[2025-12-14 02:00:01] drwx------. 5 boinc boinc      4096 Dec 14 01:53 pilot3
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc       524 Dec 14 01:56 boinc_task_state.xml
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc      1001 Dec 14 01:57 memory_monitor_summary.json
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc     49863 Dec 14 01:57 log.47866709._000058.job.log.tgz.1
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc        95 Dec 14 01:58 pilot_heartbeat.json
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc      9913 Dec 14 01:59 heartbeat.json
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc      8192 Dec 14 01:59 boinc_mmap_file
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc        23 Dec 14 01:59 wrapper_checkpoint.txt
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc      4822 Dec 14 02:00 pilotlog.txt
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc    103572 Dec 14 02:00 log.47866709._000058.job.log.1
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc       186 Dec 14 02:00 output.list
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc       620 Dec 14 02:00 runtime_log
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc    174080 Dec 14 02:00 result.tar.gz
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc       647 Dec 14 02:00 TWGMDmmGtn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8BNKDm8zNNWm.diag
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc      8634 Dec 14 02:00 runtime_log.err
[2025-12-14 02:00:01] -rw-r--r--. 1 boinc boinc     22335 Dec 14 02:00 stderr.txt
[2025-12-14 02:00:01] No HITS result produced
[2025-12-14 02:00:01]  *** Contents of shared directory: ***
[2025-12-14 02:00:01] total 319824
[2025-12-14 02:00:01] -rw-r--r--. 2 boinc boinc 326707806 Dec 14 01:53 ATLAS.root_0
[2025-12-14 02:00:01] -rw-r--r--. 2 boinc boinc     15847 Dec 14 01:53 start_atlas.sh
[2025-12-14 02:00:01] -rw-r--r--. 2 boinc boinc    592580 Dec 14 01:53 input.tar.gz
[2025-12-14 02:00:01] -rw-------. 1 boinc boinc    174080 Dec 14 02:00 result.tar.gz
02:00:03 (446051): run_atlas exited; CPU time 71.159112
02:00:03 (446051): called boinc_finish(0)

</stderr_txt>
]]>

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