Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:26:34 (1256297): wrapper (7.7.26015): starting
20:26:34 (1256297): wrapper: running run_atlas (--nthreads 2)
[2025-12-14 20:26:34] Arguments: --nthreads 2
[2025-12-14 20:26:34] Threads: 2
[2025-12-14 20:26:34] Checking for CVMFS
[2025-12-14 20:26:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 20:26:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 20:26:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 20:26:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 20:26:35] 2.9.2.0 925053 1688 54200 154006 3 56 35129174 36864000 0 130560 0 877590 99.985 61578 19225 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-14 20:26:35] CVMFS is ok
[2025-12-14 20:26:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 20:26:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 20:26:35] Further information can be found at the LHC@home message board.
[2025-12-14 20:26:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 20:26:35] Checking for apptainer binary...
[2025-12-14 20:26:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 20:26:35] Running /usr/bin/apptainer --version
[2025-12-14 20:26:35] apptainer version 1.4.1-1.1
[2025-12-14 20:26:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 20:26:35] atlasA219
[2025-12-14 20:26:35] apptainer works
[2025-12-14 20:26:35] Set ATHENA_PROC_NUMBER=2
[2025-12-14 20:26:35] Set ATHENA_CORE_NUMBER=2
[2025-12-14 20:26:35] Starting ATLAS job with PandaID=6929363269
[2025-12-14 20:26:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 23:15:07]  *** The last 200 lines of the pilot log: ***
[2025-12-14 23:15:07] 2025-12-14 22:14:36,506 | INFO     | [data] copytool_out thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,570 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,744 | INFO     | [job] control thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,842 | INFO     | [job] validate thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,914 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,914 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,919 | INFO     | [data] copytool_in thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:36,994 | INFO     | [payload] failed_post thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:37,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 23:15:07] 2025-12-14 22:14:38,430 | INFO     | [job] queue monitor thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:40,413 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:14:45,249 | INFO     | job.realtimelogging is not enabled
[2025-12-14 23:15:07] 2025-12-14 22:14:46,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 23:15:07] 2025-12-14 22:15:02,223 | INFO     | [monitor] cgroup control has ended
[2025-12-14 23:15:07] 2025-12-14 22:15:02,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133931005760)>', '<ExcThread(monitor, started 140133290465024)>']
[2025-12-14 23:15:07] 2025-12-14 22:15:04,642 | INFO     | PID=1260006 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 23:15:07] 2025-12-14 22:15:04,642 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 23:15:07] 2025-12-14 22:15:04,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 23:15:07] 2025-12-14 22:15:04,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 23:15:07] 2025-12-14 22:15:04,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 23:15:07] 2025-12-14 22:15:04,643 | INFO     | [monitor] control thread has ended
[2025-12-14 23:15:07] 2025-12-14 22:15:07,632 | INFO     | all workflow threads have been joined
[2025-12-14 23:15:07] 2025-12-14 22:15:07,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 23:15:07] 2025-12-14 22:15:07,633 | INFO     | traces error code: 0
[2025-12-14 23:15:07] 2025-12-14 22:15:07,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 23:15:07] 2025-12-14 22:15:07,677 [wrapper] ==== pilot stdout END ====
[2025-12-14 23:15:07] 2025-12-14 22:15:07,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 23:15:07] 2025-12-14 22:15:07,682 [wrapper] pilotpid: 1260006
[2025-12-14 23:15:07] 2025-12-14 22:15:07,684 [wrapper] Pilot exit status: 0
[2025-12-14 23:15:07] 2025-12-14 22:15:07,691 [wrapper] pandaids: 6929363269
[2025-12-14 23:15:07] 2025-12-14 22:15:07,704 [wrapper] cleanup supervisor_pilot 1285270 1260007
[2025-12-14 23:15:07] 2025-12-14 22:15:07,707 [wrapper] Test setup, not cleaning
[2025-12-14 23:15:07] 2025-12-14 22:15:07,709 [wrapper] apfmon messages muted
[2025-12-14 23:15:07] 2025-12-14 22:15:07,711 [wrapper] ==== wrapper stdout END ====
[2025-12-14 23:15:07] 2025-12-14 22:15:07,713 [wrapper] ==== wrapper stderr END ====
[2025-12-14 23:15:07]  *** Error codes and diagnostics ***
[2025-12-14 23:15:07]     "exeErrorCode": 0,
[2025-12-14 23:15:07]     "exeErrorDiag": "",
[2025-12-14 23:15:07]     "pilotErrorCode": 0,
[2025-12-14 23:15:07]     "pilotErrorDiag": "",
[2025-12-14 23:15:07]  *** Listing of results directory ***
[2025-12-14 23:15:07] total 437024
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc    579449 Dec 13 18:18 pilot3.tar.gz
[2025-12-14 23:15:07] -rwx------ 1 boinc boinc     36322 Dec 13 18:23 runpilot2-wrapper.sh
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc      5112 Dec 13 18:25 queuedata.json
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc       100 Dec 14 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 23:15:07] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 20:26 run_atlas
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc       105 Dec 14 20:26 job.xml
[2025-12-14 23:15:07] -rw-r--r-- 2 boinc boinc 223670254 Dec 14 20:26 EVNT.47898761._000142.pool.root.1
[2025-12-14 23:15:07] -rw-r--r-- 2 boinc boinc    592395 Dec 14 20:26 input.tar.gz
[2025-12-14 23:15:07] -rw-r--r-- 2 boinc boinc     15847 Dec 14 20:26 start_atlas.sh
[2025-12-14 23:15:07] drwxrwx--x 2 boinc boinc      4096 Dec 14 20:26 shared
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc         0 Dec 14 20:26 boinc_setup_complete
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc      6208 Dec 14 20:26 init_data.xml
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc         0 Dec 14 20:26 boinc_lockfile
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc      2504 Dec 14 20:26 pandaJob.out
[2025-12-14 23:15:07] -rw------- 1 boinc boinc    991016 Dec 14 20:26 agis_schedconf.cvmfs.json
[2025-12-14 23:15:07] -rw------- 1 boinc boinc   1516240 Dec 14 20:26 agis_ddmendpoints.agis.ALL.json
[2025-12-14 23:15:07] drwx------ 5 boinc boinc      4096 Dec 14 20:26 pilot3
[2025-12-14 23:15:07] -rw------- 1 boinc boinc 216481178 Dec 14 23:13 HITS.47898763._006659.pool.root.1
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc       530 Dec 14 23:14 boinc_task_state.xml
[2025-12-14 23:15:07] -rw------- 1 boinc boinc      1015 Dec 14 23:14 memory_monitor_summary.json
[2025-12-14 23:15:07] -rw------- 1 boinc boinc    303652 Dec 14 23:14 log.47898763._006659.job.log.tgz.1
[2025-12-14 23:15:07] -rw------- 1 boinc boinc      7752 Dec 14 23:14 heartbeat.json
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc      8192 Dec 14 23:14 boinc_mmap_file
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc        28 Dec 14 23:14 wrapper_checkpoint.txt
[2025-12-14 23:15:07] -rw------- 1 boinc boinc        95 Dec 14 23:15 pilot_heartbeat.json
[2025-12-14 23:15:07] -rw------- 1 boinc boinc      4824 Dec 14 23:15 pilotlog.txt
[2025-12-14 23:15:07] -rw------- 1 boinc boinc   1429897 Dec 14 23:15 log.47898763._006659.job.log.1
[2025-12-14 23:15:07] -rw------- 1 boinc boinc       357 Dec 14 23:15 output.list
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc       620 Dec 14 23:15 runtime_log
[2025-12-14 23:15:07] -rw------- 1 boinc boinc   1751040 Dec 14 23:15 result.tar.gz
[2025-12-14 23:15:07] -rw------- 1 boinc boinc       665 Dec 14 23:15 to0KDmoVio8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsDUKDmBkEhrm.diag
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc      8913 Dec 14 23:15 runtime_log.err
[2025-12-14 23:15:07] -rw-r--r-- 1 boinc boinc      6038 Dec 14 23:15 stderr.txt
[2025-12-14 23:15:07] HITS file was successfully produced:
[2025-12-14 23:15:07] -rw------- 1 boinc boinc 216481178 Dec 14 23:13 shared/HITS.pool.root.1
[2025-12-14 23:15:07]  *** Contents of shared directory: ***
[2025-12-14 23:15:07] total 432148
[2025-12-14 23:15:07] -rw-r--r-- 2 boinc boinc 223670254 Dec 14 20:26 ATLAS.root_0
[2025-12-14 23:15:07] -rw-r--r-- 2 boinc boinc    592395 Dec 14 20:26 input.tar.gz
[2025-12-14 23:15:07] -rw-r--r-- 2 boinc boinc     15847 Dec 14 20:26 start_atlas.sh
[2025-12-14 23:15:07] -rw------- 1 boinc boinc 216481178 Dec 14 23:13 HITS.pool.root.1
[2025-12-14 23:15:07] -rw------- 1 boinc boinc   1751040 Dec 14 23:15 result.tar.gz
23:15:09 (1256297): run_atlas exited; CPU time 19659.070602
23:15:09 (1256297): called boinc_finish(0)

</stderr_txt>
]]>

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