Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:34:40 (10454): wrapper (7.7.26015): starting
16:34:40 (10454): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 16:34:40] Arguments: --nthreads 8
[2025-12-14 16:34:40] Threads: 8
[2025-12-14 16:34:40] Checking for CVMFS
[2025-12-14 16:34:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 16:34:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 16:34:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 16:34:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 16:34:42] 2.11.2.0 19274 115409 132860 154000 2 60 23893042 25165824 3704 130560 10 36305474 99.863 23882809 1994 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 16:34:42] CVMFS is ok
[2025-12-14 16:34:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 16:34:42] Checking for apptainer binary...
[2025-12-14 16:34:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 16:34:42] Running /usr/bin/apptainer --version
[2025-12-14 16:34:43] apptainer version 1.3.2-1.el7
[2025-12-14 16:34:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 16:35:14] cg-vwn396.simple-grid.lan
[2025-12-14 16:35:14] apptainer works
[2025-12-14 16:35:14] Set ATHENA_PROC_NUMBER=8
[2025-12-14 16:35:14] Set ATHENA_CORE_NUMBER=8
[2025-12-14 16:35:14] Starting ATLAS job with PandaID=6929348481
[2025-12-14 16:35:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:34:29]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:34:29] 2025-12-14 21:33:15,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:34:29] 2025-12-14 21:33:15,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 22:34:29] 2025-12-14 21:33:15,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 22:34:29] 2025-12-14 21:33:15,928 | INFO     | fitting pss+swap vs Time
[2025-12-14 22:34:29] 2025-12-14 21:33:15,928 | INFO     | sum of square deviations: 12080189290.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,932 | INFO     | sum of deviations: 144056027541.99997
[2025-12-14 22:34:29] 2025-12-14 21:33:15,932 | INFO     | mean x: 1765737525.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,933 | INFO     | mean y: 2456360.0206489675
[2025-12-14 22:34:29] 2025-12-14 21:33:15,933 | INFO     | intersect: -21053930044.77739
[2025-12-14 22:34:29] 2025-12-14 21:33:15,933 | INFO     | chi2: 6.665200550977779
[2025-12-14 22:34:29] 2025-12-14 21:33:15,934 | INFO     | sum of square deviations: 11553509647.5
[2025-12-14 22:34:29] 2025-12-14 21:33:15,938 | INFO     | sum of deviations: 164954023276.00006
[2025-12-14 22:34:29] 2025-12-14 21:33:15,938 | INFO     | mean x: 1765737372.5
[2025-12-14 22:34:29] 2025-12-14 21:33:15,938 | INFO     | mean y: 2462330.760479042
[2025-12-14 22:34:29] 2025-12-14 21:33:15,938 | INFO     | intersect: -25207667969.83554
[2025-12-14 22:34:29] 2025-12-14 21:33:15,939 | INFO     | chi2: 5.886404253640416
[2025-12-14 22:34:29] 2025-12-14 21:33:15,939 | INFO     | current chi2=5.886404253640416 (change=11.684514087473552 %)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,939 | INFO     | right removable region: 333
[2025-12-14 22:34:29] 2025-12-14 21:33:15,939 | INFO     | sum of square deviations: 11553509647.5
[2025-12-14 22:34:29] 2025-12-14 21:33:15,958 | INFO     | monitor loop #1502: job 0:6929348481 is in state 'finished'
[2025-12-14 22:34:29] 2025-12-14 21:33:15,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,960 | INFO     | sum of deviations: 29142924277.000004
[2025-12-14 22:34:29] 2025-12-14 21:33:15,960 | INFO     | mean x: 1765737677.5
[2025-12-14 22:34:29] 2025-12-14 21:33:15,960 | INFO     | mean y: 2489612.7844311376
[2025-12-14 22:34:29] 2025-12-14 21:33:15,960 | INFO     | intersect: -4451460831.578008
[2025-12-14 22:34:29] 2025-12-14 21:33:15,961 | INFO     | chi2: 2.2508645376252514
[2025-12-14 22:34:29] 2025-12-14 21:33:15,961 | INFO     | current chi2=2.2508645376252514 (change=66.22960523978455 %)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,961 | INFO     | sum of square deviations: 11042365180.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,965 | INFO     | sum of deviations: -27092327720.000004
[2025-12-14 22:34:29] 2025-12-14 21:33:15,965 | INFO     | mean x: 1765737830.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,965 | INFO     | mean y: 2506313.2948328266
[2025-12-14 22:34:29] 2025-12-14 21:33:15,965 | INFO     | intersect: 4334725650.19976
[2025-12-14 22:34:29] 2025-12-14 21:33:15,966 | INFO     | chi2: 0.9475429847332533
[2025-12-14 22:34:29] 2025-12-14 21:33:15,966 | INFO     | current chi2=0.9475429847332533 (change=57.90315370408974 %)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,966 | INFO     | sum of square deviations: 10546523325.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,970 | INFO     | sum of deviations: -26533885865.499996
[2025-12-14 22:34:29] 2025-12-14 21:33:15,970 | INFO     | mean x: 1765737982.5
[2025-12-14 22:34:29] 2025-12-14 21:33:15,970 | INFO     | mean y: 2506124.046296296
[2025-12-14 22:34:29] 2025-12-14 21:33:15,970 | INFO     | intersect: 4444907534.658379
[2025-12-14 22:34:29] 2025-12-14 21:33:15,971 | INFO     | chi2: 0.9312993033089219
[2025-12-14 22:34:29] 2025-12-14 21:33:15,971 | INFO     | current chi2=0.9312993033089219 (change=1.7142949381767878 %)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,971 | INFO     | left removable region: 30
[2025-12-14 22:34:29] 2025-12-14 21:33:15,972 | INFO     | sum of square deviations: 8625843592.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,983 | INFO     | sum of deviations: 17610823585.999996
[2025-12-14 22:34:29] 2025-12-14 21:33:15,983 | INFO     | mean x: 1765738257.0
[2025-12-14 22:34:29] 2025-12-14 21:33:15,983 | INFO     | mean y: 2505883.5544554456
[2025-12-14 22:34:29] 2025-12-14 21:33:15,983 | INFO     | intersect: -3602487020.782237
[2025-12-14 22:34:29] 2025-12-14 21:33:15,984 | INFO     | chi2: 0.0027187788416932583
[2025-12-14 22:34:29] 2025-12-14 21:33:15,984 | INFO     | current memory leak: 2.04 B/s (using 303 data points, chi2=0.00)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,985 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-14 22:34:29] 2025-12-14 21:33:15,985 | INFO     | ..............................
[2025-12-14 22:34:29] 2025-12-14 21:33:15,985 | INFO     | . Timing measurements:
[2025-12-14 22:34:29] 2025-12-14 21:33:15,985 | INFO     | . get job = 0 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,985 | INFO     | . initial setup = 8 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,986 | INFO     | . payload setup = 133 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,986 | INFO     | . stage-in = 0 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,986 | INFO     | . payload execution = 20842 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,986 | INFO     | . stage-out = 4 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,986 | INFO     | . log creation = 1 s
[2025-12-14 22:34:29] 2025-12-14 21:33:15,986 | INFO     | ..............................
[2025-12-14 22:34:29] 2025-12-14 21:33:16,121 | INFO     | 
[2025-12-14 22:34:29] 2025-12-14 21:33:16,121 | INFO     | job summary report
[2025-12-14 22:34:29] 2025-12-14 21:33:16,121 | INFO     | --------------------------------------------------
[2025-12-14 22:34:29] 2025-12-14 21:33:16,121 | INFO     | PanDA job id: 6929348481
[2025-12-14 22:34:29] 2025-12-14 21:33:16,121 | INFO     | task id: 47898782
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | errors: (none)
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | pilot state: finished 
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | transexitcode: 0
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | exeerrorcode: 0
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | exeerrordiag: 
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | exitcode: 0
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | exitmsg: OK
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | cpuconsumptiontime: 79798 s
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | nevents: 400
[2025-12-14 22:34:29] 2025-12-14 21:33:16,122 | INFO     | neventsw: 0
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | pid: 20870
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | pgrp: 20870
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | corecount: 8
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | event service: False
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | sizes: {0: 2283152, 1: 2283837, 2: 2284036, 13: 2284036, 23: 2284092, 34: 2284120, 45: 2284276, 55: 2284304, 66: 2284332, 77: 2284360, 88: 2284416, 91: 2284986, 98
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | --------------------------------------------------
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | 
[2025-12-14 22:34:29] 2025-12-14 21:33:16,123 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-12-14 22:34:29] 2025-12-14 21:33:16,265 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 22:34:29] 2025-12-14 21:33:16,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 22:34:29] 2025-12-14 21:33:16,268 | INFO     | job 6929348481 has completed (purged errors)
[2025-12-14 22:34:29] 2025-12-14 21:33:16,268 | INFO     | overall cleanup function is called
[2025-12-14 22:34:29] 2025-12-14 21:33:16,700 | INFO     | PID=14234 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 22:34:29] 2025-12-14 21:33:16,701 | INFO     | .. there are 9 such processes running
[2025-12-14 22:34:29] 2025-12-14 21:33:17,276 | INFO     | --- collectZombieJob: --- 10, [20870]
[2025-12-14 22:34:29] 2025-12-14 21:33:17,276 | INFO     | zombie collector waiting for pid 20870
[2025-12-14 22:34:29] 2025-12-14 21:33:17,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 22:34:29] 2025-12-14 21:33:17,276 | INFO     | collected zombie processes
[2025-12-14 22:34:29] 2025-12-14 21:33:17,277 | INFO     | will attempt to kill all subprocesses of pid=20870
[2025-12-14 22:34:29] 2025-12-14 21:33:17,387 | INFO     | process IDs to be killed: [20870] (in reverse order)
[2025-12-14 22:34:29] 2025-12-14 21:33:17,609 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 22:34:29] 2025-12-14 21:33:17,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 22:34:29] 2025-12-14 21:33:17,612 | INFO     | did not find any defunct processes belonging to 20870
[2025-12-14 22:34:29] 2025-12-14 21:33:17,615 | INFO     | did not find any defunct processes belonging to 20870
[2025-12-14 22:34:29] 2025-12-14 21:33:17,615 | INFO     | ready for new job
[2025-12-14 22:34:29] 2025-12-14 21:33:17,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 22:34:29] 2025-12-14 21:33:17,617 | INFO     | ***************************************
[2025-12-14 22:34:29] 2025-12-14 21:33:17,618 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 22:34:29] 2025-12-14 21:33:17,618 | INFO     | ***************************************
[2025-12-14 22:34:29] 2025-12-14 21:33:17,618 | INFO     | 
[2025-12-14 22:34:29] 2025-12-14 21:33:17,619 | INFO     | pilot is running in a VM
[2025-12-14 22:34:29] 2025-12-14 21:33:17,619 | INFO     | architecture information:
[2025-12-14 22:34:29] 2025-12-14 21:33:17,622 | INFO     | executing command: cat /etc/os-release
[2025-12-14 22:34:29] 2025-12-14 21:33:17,801 | INFO     | cat /etc/os-release:
[2025-12-14 22:34:29] NAME="CentOS Linux"
[2025-12-14 22:34:29] VERSION="7 (Core)"
[2025-12-14 22:34:29] ID="centos"
[2025-12-14 22:34:29] ID_LIKE="rhel fedora"
[2025-12-14 22:34:29] VERSION_ID="7"
[2025-12-14 22:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 22:34:29] ANSI_COLOR="0;31"
[2025-12-14 22:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 22:34:29] HOME_URL="https://www.centos.org/"
[2025-12-14 22:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 22:34:29] 
[2025-12-14 22:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 22:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 22:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 22:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 22:34:29] 
[2025-12-14 22:34:29] 2025-12-14 21:33:17,802 | INFO     | ***************************************
[2025-12-14 22:34:29] 2025-12-14 21:33:18,305 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-12-14 22:34:29] 2025-12-14 21:33:18,433 | INFO     | sufficient remaining disk space (497493737472 B)
[2025-12-14 22:34:29] 2025-12-14 21:33:18,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 22:34:29] 2025-12-14 21:33:18,434 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 22:34:29] 2025-12-14 21:33:18,434 | INFO     | update_server=False
[2025-12-14 22:34:29] 2025-12-14 21:33:18,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 22:34:29] 2025-12-14 21:33:18,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 22:34:29] 2025-12-14 21:33:18,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:34:29] 2025-12-14 21:33:18,463 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 22:34:29] 2025-12-14 21:33:18,463 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 22:34:29] 2025-12-14 21:33:18,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:34:29] 2025-12-14 21:33:18,463 | INFO     | will abort loop
[2025-12-14 22:34:29] 2025-12-14 21:33:18,491 | INFO     | all data control threads have been joined
[2025-12-14 22:34:29] 2025-12-14 21:33:18,720 | INFO     | all job control threads have been joined
[2025-12-14 22:34:29] 2025-12-14 21:33:18,735 | INFO     | all payload control threads have been joined
[2025-12-14 22:34:29] 2025-12-14 21:33:19,440 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,468 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,497 | INFO     | [data] control thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,600 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,687 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,728 | INFO     | [job] control thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,741 | INFO     | [payload] control thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,762 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:19,858 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:20,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:20,447 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:20,627 | INFO     | [job] validate thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:20,650 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:21,004 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:21,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:34:29] 2025-12-14 21:33:22,141 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:22,448 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:34:29] 2025-12-14 21:33:48,862 | INFO     | PID=14234 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 22:34:29] 2025-12-14 21:33:48,862 | INFO     | .. there are 9 such processes running
[2025-12-14 22:34:29] 2025-12-14 21:33:48,862 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:34:29] 2025-12-14 21:33:48,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:34:29] 2025-12-14 21:33:48,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:34:29] 2025-12-14 21:34:17,503 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:34:29] 2025-12-14 21:34:19,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035162912576)>', '<ExcThread(monitor, started 140034455893760)>']
[2025-12-14 22:34:29] 2025-12-14 21:34:20,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:34:29] 2025-12-14 21:34:20,044 | INFO     | [monitor] control thread has ended
[2025-12-14 22:34:29] 2025-12-14 21:34:24,083 | INFO     | all workflow threads have been joined
[2025-12-14 22:34:29] 2025-12-14 21:34:24,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:34:29] 2025-12-14 21:34:24,083 | INFO     | traces error code: 0
[2025-12-14 22:34:29] 2025-12-14 21:34:24,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:34:29] 2025-12-14 21:34:24,465 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:34:29] 2025-12-14 21:34:24,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:34:29] 2025-12-14 21:34:24,668 [wrapper] pilotpid: 14234
[2025-12-14 22:34:29] 2025-12-14 21:34:24,775 [wrapper] Pilot exit status: 0
[2025-12-14 22:34:29] 2025-12-14 21:34:25,284 [wrapper] pandaids: 6929348481
[2025-12-14 22:34:29] 2025-12-14 21:34:26,192 [wrapper] cleanup supervisor_pilot 24551 14235
[2025-12-14 22:34:29] 2025-12-14 21:34:26,277 [wrapper] Test setup, not cleaning
[2025-12-14 22:34:29] 2025-12-14 21:34:26,364 [wrapper] apfmon messages muted
[2025-12-14 22:34:29] 2025-12-14 21:34:26,421 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:34:29] 2025-12-14 21:34:26,491 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:34:29]  *** Error codes and diagnostics ***
[2025-12-14 22:34:29]     "exeErrorCode": 0,
[2025-12-14 22:34:29]     "exeErrorDiag": "",
[2025-12-14 22:34:29]     "pilotErrorCode": 0,
[2025-12-14 22:34:29]     "pilotErrorDiag": "",
[2025-12-14 22:34:29]  *** Listing of results directory ***
[2025-12-14 22:34:29] total 419624
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc    579449 Dec 13 18:18 pilot3.tar.gz
[2025-12-14 22:34:29] -rwx------. 1 boinc boinc     36322 Dec 13 18:23 runpilot2-wrapper.sh
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc      5112 Dec 13 18:25 queuedata.json
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc       100 Dec 14 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:34:29] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 16:34 run_atlas
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc       105 Dec 14 16:34 job.xml
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc      6393 Dec 14 16:34 init_data.xml
[2025-12-14 22:34:29] -rw-r--r--. 2 boinc boinc 214059771 Dec 14 16:34 EVNT.47898779._000143.pool.root.1
[2025-12-14 22:34:29] -rw-r--r--. 2 boinc boinc     15847 Dec 14 16:34 start_atlas.sh
[2025-12-14 22:34:29] drwxrwx--x. 2 boinc boinc        68 Dec 14 16:34 shared
[2025-12-14 22:34:29] -rw-r--r--. 2 boinc boinc    592397 Dec 14 16:34 input.tar.gz
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc         0 Dec 14 16:34 boinc_lockfile
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc      2522 Dec 14 16:35 pandaJob.out
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc    991032 Dec 14 16:38 agis_schedconf.cvmfs.json
[2025-12-14 22:34:29] drwx------. 5 boinc boinc      4096 Dec 14 16:38 pilot3
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc 205037514 Dec 14 22:30 HITS.47898782._003391.pool.root.1
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc       531 Dec 14 22:30 boinc_task_state.xml
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc      1013 Dec 14 22:31 memory_monitor_summary.json
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc   1516240 Dec 14 22:31 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc    534986 Dec 14 22:31 log.47898782._003391.job.log.tgz.1
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc        95 Dec 14 22:33 pilot_heartbeat.json
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc      7769 Dec 14 22:33 heartbeat.json
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc      8192 Dec 14 22:34 boinc_mmap_file
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc        28 Dec 14 22:34 wrapper_checkpoint.txt
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc      5070 Dec 14 22:34 pilotlog.txt
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc   2817551 Dec 14 22:34 log.47898782._003391.job.log.1
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc       357 Dec 14 22:34 output.list
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc       620 Dec 14 22:34 runtime_log
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc   3368960 Dec 14 22:34 result.tar.gz
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc      8817 Dec 14 22:34 runtime_log.err
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc       657 Dec 14 22:34 DtSNDm0Vio8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmEUKDm7ZJmRn.diag
[2025-12-14 22:34:29] -rw-r--r--. 1 boinc boinc     20893 Dec 14 22:34 stderr.txt
[2025-12-14 22:34:29] HITS file was successfully produced:
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc 205037514 Dec 14 22:30 shared/HITS.pool.root.1
[2025-12-14 22:34:29]  *** Contents of shared directory: ***
[2025-12-14 22:34:29] total 413164
[2025-12-14 22:34:29] -rw-r--r--. 2 boinc boinc 214059771 Dec 14 16:34 ATLAS.root_0
[2025-12-14 22:34:29] -rw-r--r--. 2 boinc boinc     15847 Dec 14 16:34 start_atlas.sh
[2025-12-14 22:34:29] -rw-r--r--. 2 boinc boinc    592397 Dec 14 16:34 input.tar.gz
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc 205037514 Dec 14 22:30 HITS.pool.root.1
[2025-12-14 22:34:29] -rw-------. 1 boinc boinc   3368960 Dec 14 22:34 result.tar.gz
22:34:30 (10454): run_atlas exited; CPU time 80091.140900
22:34:30 (10454): called boinc_finish(0)

</stderr_txt>
]]>

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