Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:54 (15006): wrapper (7.7.26015): starting
16:44:54 (15006): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 16:44:54] Arguments: --nthreads 8
[2025-12-14 16:44:54] Threads: 8
[2025-12-14 16:44:54] Checking for CVMFS
[2025-12-14 16:44:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 16:44:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 16:44:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 16:44:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 16:44:58] 2.11.2.0 27053 198292 136272 154000 0 61 14606652 25165824 4516 130560 12 69449944 99.880 39904862 2270 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 16:44:58] CVMFS is ok
[2025-12-14 16:44:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 16:44:58] Checking for apptainer binary...
[2025-12-14 16:44:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 16:44:58] Running /usr/bin/apptainer --version
[2025-12-14 16:44:58] apptainer version 1.3.2-1.el7
[2025-12-14 16:44:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 16:45:15] cg-vwn373.simple-grid.lan
[2025-12-14 16:45:15] apptainer works
[2025-12-14 16:45:15] Set ATHENA_PROC_NUMBER=8
[2025-12-14 16:45:15] Set ATHENA_CORE_NUMBER=8
[2025-12-14 16:45:15] Starting ATLAS job with PandaID=6929302632
[2025-12-14 16:45:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 22:51:30]  *** The last 200 lines of the pilot log: ***
[2025-12-14 22:51:30] 2025-12-14 21:50:34,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:51:30] 2025-12-14 21:50:35,070 | INFO     | time since job start (21712s) is within the limit (174528.0s)
[2025-12-14 22:51:30] 2025-12-14 21:50:37,085 | INFO     | time since job start (21714s) is within the limit (174528.0s)
[2025-12-14 22:51:30] 2025-12-14 21:50:37,294 | INFO     | monitor loop #1539: job 0:6929302632 is in state 'finished'
[2025-12-14 22:51:30] 2025-12-14 21:50:37,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,567 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 22:51:30] 2025-12-14 21:50:38,568 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 22:51:30] 2025-12-14 21:50:38,570 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6929302632/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,570 | INFO     | extracted standard info from prmon json
[2025-12-14 22:51:30] 2025-12-14 21:50:38,570 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 22:51:30] 2025-12-14 21:50:38,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 22:51:30] 2025-12-14 21:50:38,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 22:51:30] 2025-12-14 21:50:38,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 22:51:30] 2025-12-14 21:50:38,579 | INFO     | fitting pss+swap vs Time
[2025-12-14 22:51:30] 2025-12-14 21:50:38,579 | INFO     | sum of square deviations: 12955770358.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,583 | INFO     | sum of deviations: 121497703796.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,584 | INFO     | mean x: 1765738358.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,584 | INFO     | mean y: 2468640.7002881845
[2025-12-14 22:51:30] 2025-12-14 21:50:38,584 | INFO     | intersect: -16556419798.461363
[2025-12-14 22:51:30] 2025-12-14 21:50:38,606 | INFO     | chi2: 4.7917009559406045
[2025-12-14 22:51:30] 2025-12-14 21:50:38,606 | INFO     | sum of square deviations: 12403750705.5
[2025-12-14 22:51:30] 2025-12-14 21:50:38,610 | INFO     | sum of deviations: 142313976213.50003
[2025-12-14 22:51:30] 2025-12-14 21:50:38,610 | INFO     | mean x: 1765738205.5
[2025-12-14 22:51:30] 2025-12-14 21:50:38,611 | INFO     | mean y: 2474316.7339181285
[2025-12-14 22:51:30] 2025-12-14 21:50:38,611 | INFO     | intersect: -20256657855.712116
[2025-12-14 22:51:30] 2025-12-14 21:50:38,611 | INFO     | chi2: 4.041531033037383
[2025-12-14 22:51:30] 2025-12-14 21:50:38,611 | INFO     | current chi2=4.041531033037383 (change=15.655608098272165 %)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,611 | INFO     | right removable region: 341
[2025-12-14 22:51:30] 2025-12-14 21:50:38,612 | INFO     | sum of square deviations: 12403750705.5
[2025-12-14 22:51:30] 2025-12-14 21:50:38,616 | INFO     | sum of deviations: 10757698401.5
[2025-12-14 22:51:30] 2025-12-14 21:50:38,616 | INFO     | mean x: 1765738510.5
[2025-12-14 22:51:30] 2025-12-14 21:50:38,616 | INFO     | mean y: 2499194.4532163744
[2025-12-14 22:51:30] 2025-12-14 21:50:38,616 | INFO     | intersect: -1528915198.0861356
[2025-12-14 22:51:30] 2025-12-14 21:50:38,617 | INFO     | chi2: 0.9685967036532159
[2025-12-14 22:51:30] 2025-12-14 21:50:38,617 | INFO     | current chi2=0.9685967036532159 (change=79.78595257593487 %)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,618 | INFO     | sum of square deviations: 11867638328.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,632 | INFO     | sum of deviations: -6431625035.999998
[2025-12-14 22:51:30] 2025-12-14 21:50:38,632 | INFO     | mean x: 1765738663.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,632 | INFO     | mean y: 2504054.721068249
[2025-12-14 22:51:30] 2025-12-14 21:50:38,632 | INFO     | intersect: 959439940.2029977
[2025-12-14 22:51:30] 2025-12-14 21:50:38,633 | INFO     | chi2: 0.8344928658669556
[2025-12-14 22:51:30] 2025-12-14 21:50:38,633 | INFO     | current chi2=0.8344928658669556 (change=13.845167682325005 %)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,633 | INFO     | left removable region: 20
[2025-12-14 22:51:30] 2025-12-14 21:50:38,633 | INFO     | sum of square deviations: 10256266720.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,637 | INFO     | sum of deviations: 24473658537.000004
[2025-12-14 22:51:30] 2025-12-14 21:50:38,637 | INFO     | mean x: 1765738785.0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,637 | INFO     | mean y: 2507631.3956386293
[2025-12-14 22:51:30] 2025-12-14 21:50:38,637 | INFO     | intersect: -4210924923.488939
[2025-12-14 22:51:30] 2025-12-14 21:50:38,638 | INFO     | chi2: 0.002613106597902564
[2025-12-14 22:51:30] 2025-12-14 21:50:38,638 | INFO     | current memory leak: 2.39 B/s (using 321 data points, chi2=0.00)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | ..............................
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | . Timing measurements:
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | . get job = 0 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | . initial setup = 8 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | . payload setup = 135 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | . stage-in = 0 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,639 | INFO     | . payload execution = 21282 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,640 | INFO     | . stage-out = 3 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,640 | INFO     | . log creation = 1 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,640 | INFO     | ..............................
[2025-12-14 22:51:30] 2025-12-14 21:50:38,879 | INFO     | 
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | job summary report
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | --------------------------------------------------
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | PanDA job id: 6929302632
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | task id: 47898763
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | errors: (none)
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | pilot state: finished 
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | transexitcode: 0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | exeerrorcode: 0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,880 | INFO     | exeerrordiag: 
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | exitcode: 0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | exitmsg: OK
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | cpuconsumptiontime: 80427 s
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | nevents: 400
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | neventsw: 0
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | pid: 25382
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | pgrp: 25382
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | corecount: 8
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | event service: False
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | sizes: {0: 2283725, 1: 2283980, 12: 2283980, 23: 2284008, 34: 2284036, 44: 2284064, 55: 2284220, 66: 2284248, 77: 2284276, 87: 2284332, 90: 2284622, 98: 2284930, 2
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | --------------------------------------------------
[2025-12-14 22:51:30] 2025-12-14 21:50:38,881 | INFO     | 
[2025-12-14 22:51:30] 2025-12-14 21:50:38,882 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-12-14 22:51:30] 2025-12-14 21:50:39,093 | INFO     | time since job start (21716s) is within the limit (174528.0s)
[2025-12-14 22:51:30] 2025-12-14 21:50:39,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 22:51:30] 2025-12-14 21:50:39,291 | INFO     | job 6929302632 has completed (purged errors)
[2025-12-14 22:51:30] 2025-12-14 21:50:39,292 | INFO     | overall cleanup function is called
[2025-12-14 22:51:30] 2025-12-14 21:50:40,300 | INFO     | --- collectZombieJob: --- 10, [25382]
[2025-12-14 22:51:30] 2025-12-14 21:50:40,301 | INFO     | zombie collector waiting for pid 25382
[2025-12-14 22:51:30] 2025-12-14 21:50:40,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 22:51:30] 2025-12-14 21:50:40,301 | INFO     | collected zombie processes
[2025-12-14 22:51:30] 2025-12-14 21:50:40,301 | INFO     | will attempt to kill all subprocesses of pid=25382
[2025-12-14 22:51:30] 2025-12-14 21:50:40,462 | INFO     | process IDs to be killed: [25382] (in reverse order)
[2025-12-14 22:51:30] 2025-12-14 21:50:41,114 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 22:51:30] 2025-12-14 21:50:41,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 22:51:30] 2025-12-14 21:50:41,117 | INFO     | did not find any defunct processes belonging to 25382
[2025-12-14 22:51:30] 2025-12-14 21:50:41,120 | INFO     | did not find any defunct processes belonging to 25382
[2025-12-14 22:51:30] 2025-12-14 21:50:41,120 | INFO     | ready for new job
[2025-12-14 22:51:30] 2025-12-14 21:50:41,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 22:51:30] 2025-12-14 21:50:41,123 | INFO     | ***************************************
[2025-12-14 22:51:30] 2025-12-14 21:50:41,123 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 22:51:30] 2025-12-14 21:50:41,123 | INFO     | ***************************************
[2025-12-14 22:51:30] 2025-12-14 21:50:41,123 | INFO     | 
[2025-12-14 22:51:30] 2025-12-14 21:50:41,124 | INFO     | pilot is running in a VM
[2025-12-14 22:51:30] 2025-12-14 21:50:41,124 | INFO     | architecture information:
[2025-12-14 22:51:30] 2025-12-14 21:50:41,131 | INFO     | executing command: cat /etc/os-release
[2025-12-14 22:51:30] 2025-12-14 21:50:41,360 | INFO     | cat /etc/os-release:
[2025-12-14 22:51:30] NAME="CentOS Linux"
[2025-12-14 22:51:30] VERSION="7 (Core)"
[2025-12-14 22:51:30] ID="centos"
[2025-12-14 22:51:30] ID_LIKE="rhel fedora"
[2025-12-14 22:51:30] VERSION_ID="7"
[2025-12-14 22:51:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 22:51:30] ANSI_COLOR="0;31"
[2025-12-14 22:51:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 22:51:30] HOME_URL="https://www.centos.org/"
[2025-12-14 22:51:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 22:51:30] 
[2025-12-14 22:51:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 22:51:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 22:51:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 22:51:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 22:51:30] 
[2025-12-14 22:51:30] 2025-12-14 21:50:41,360 | INFO     | ***************************************
[2025-12-14 22:51:30] 2025-12-14 21:50:41,864 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-12-14 22:51:30] 2025-12-14 21:50:42,107 | INFO     | sufficient remaining disk space (495732129792 B)
[2025-12-14 22:51:30] 2025-12-14 21:50:42,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 22:51:30] 2025-12-14 21:50:42,107 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 22:51:30] 2025-12-14 21:50:42,108 | INFO     | update_server=False
[2025-12-14 22:51:30] 2025-12-14 21:50:42,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 22:51:30] 2025-12-14 21:50:42,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 22:51:30] 2025-12-14 21:50:42,317 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 22:51:30] 2025-12-14 21:50:42,318 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 22:51:30] 2025-12-14 21:50:42,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:51:30] 2025-12-14 21:50:42,318 | INFO     | will abort loop
[2025-12-14 22:51:30] 2025-12-14 21:50:42,561 | INFO     | all data control threads have been joined
[2025-12-14 22:51:30] 2025-12-14 21:50:43,058 | INFO     | all payload control threads have been joined
[2025-12-14 22:51:30] 2025-12-14 21:50:43,114 | INFO     | [job] retrieve thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,121 | INFO     | [payload] validate_post thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,193 | INFO     | [payload] failed_post thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,242 | INFO     | [data] copytool_in thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,325 | INFO     | [job] job monitor thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,482 | INFO     | all job control threads have been joined
[2025-12-14 22:51:30] 2025-12-14 21:50:43,548 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,552 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,567 | INFO     | [data] control thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,707 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:43,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 22:51:30] 2025-12-14 21:50:43,949 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:44,064 | INFO     | [payload] control thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:44,267 | INFO     | [data] copytool_out thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:44,487 | INFO     | [job] control thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:44,586 | INFO     | [job] validate thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:44,831 | INFO     | [job] queue monitor thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:50:45,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 22:51:30] 2025-12-14 21:50:49,439 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 22:51:30] 2025-12-14 21:51:12,281 | INFO     | PID=18801 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 22:51:30] 2025-12-14 21:51:12,281 | INFO     | .. there are 9 such processes running
[2025-12-14 22:51:30] 2025-12-14 21:51:12,281 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 22:51:30] 2025-12-14 21:51:12,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 22:51:30] 2025-12-14 21:51:12,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 22:51:30] 2025-12-14 21:51:20,124 | INFO     | [monitor] cgroup control has ended
[2025-12-14 22:51:30] 2025-12-14 21:51:21,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481815619392)>', '<ExcThread(monitor, started 140481375749888)>']
[2025-12-14 22:51:30] 2025-12-14 21:51:21,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 22:51:30] 2025-12-14 21:51:21,336 | INFO     | [monitor] control thread has ended
[2025-12-14 22:51:30] 2025-12-14 21:51:26,105 | INFO     | all workflow threads have been joined
[2025-12-14 22:51:30] 2025-12-14 21:51:26,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 22:51:30] 2025-12-14 21:51:26,106 | INFO     | traces error code: 0
[2025-12-14 22:51:30] 2025-12-14 21:51:26,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 22:51:30] 2025-12-14 21:51:26,386 [wrapper] ==== pilot stdout END ====
[2025-12-14 22:51:30] 2025-12-14 21:51:26,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 22:51:30] 2025-12-14 21:51:26,586 [wrapper] pilotpid: 18801
[2025-12-14 22:51:30] 2025-12-14 21:51:26,661 [wrapper] Pilot exit status: 0
[2025-12-14 22:51:30] 2025-12-14 21:51:27,082 [wrapper] pandaids: 6929302632
[2025-12-14 22:51:30] 2025-12-14 21:51:28,010 [wrapper] cleanup supervisor_pilot 14347 18802
[2025-12-14 22:51:30] 2025-12-14 21:51:28,119 [wrapper] Test setup, not cleaning
[2025-12-14 22:51:30] 2025-12-14 21:51:28,219 [wrapper] apfmon messages muted
[2025-12-14 22:51:30] 2025-12-14 21:51:28,295 [wrapper] ==== wrapper stdout END ====
[2025-12-14 22:51:30] 2025-12-14 21:51:28,415 [wrapper] ==== wrapper stderr END ====
[2025-12-14 22:51:30]  *** Error codes and diagnostics ***
[2025-12-14 22:51:30]     "exeErrorCode": 0,
[2025-12-14 22:51:30]     "exeErrorDiag": "",
[2025-12-14 22:51:30]     "pilotErrorCode": 0,
[2025-12-14 22:51:30]     "pilotErrorDiag": "",
[2025-12-14 22:51:30]  *** Listing of results directory ***
[2025-12-14 22:51:30] total 446560
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc    579449 Dec 13 12:35 pilot3.tar.gz
[2025-12-14 22:51:30] -rwx------. 1 boinc boinc     36322 Dec 13 12:37 runpilot2-wrapper.sh
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc      5112 Dec 13 12:38 queuedata.json
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc       100 Dec 14 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 22:51:30] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 16:44 run_atlas
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc       105 Dec 14 16:44 job.xml
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc      6393 Dec 14 16:44 init_data.xml
[2025-12-14 22:51:30] -rw-r--r--. 2 boinc boinc 223427706 Dec 14 16:44 EVNT.47898761._000261.pool.root.1
[2025-12-14 22:51:30] -rw-r--r--. 2 boinc boinc     15847 Dec 14 16:44 start_atlas.sh
[2025-12-14 22:51:30] drwxrwx--x. 2 boinc boinc        68 Dec 14 16:44 shared
[2025-12-14 22:51:30] -rw-r--r--. 2 boinc boinc    592393 Dec 14 16:44 input.tar.gz
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc         0 Dec 14 16:44 boinc_lockfile
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc      2504 Dec 14 16:45 pandaJob.out
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc    991032 Dec 14 16:48 agis_schedconf.cvmfs.json
[2025-12-14 22:51:30] drwx------. 5 boinc boinc      4096 Dec 14 16:48 pilot3
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc 223049176 Dec 14 22:47 HITS.47898763._004627.pool.root.1
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc       531 Dec 14 22:47 boinc_task_state.xml
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc      1017 Dec 14 22:48 memory_monitor_summary.json
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc   1516240 Dec 14 22:49 agis_ddmendpoints.agis.ALL.json
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc    543216 Dec 14 22:49 log.47898763._004627.job.log.tgz.1
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc        95 Dec 14 22:50 pilot_heartbeat.json
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc      7775 Dec 14 22:50 heartbeat.json
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc      8192 Dec 14 22:51 boinc_mmap_file
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc        28 Dec 14 22:51 wrapper_checkpoint.txt
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc      5071 Dec 14 22:51 pilotlog.txt
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc   2907584 Dec 14 22:51 log.47898763._004627.job.log.1
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc       357 Dec 14 22:51 output.list
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc       620 Dec 14 22:51 runtime_log
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc   3471360 Dec 14 22:51 result.tar.gz
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc      8833 Dec 14 22:51 runtime_log.err
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc       658 Dec 14 22:51 pRrMDmS7co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxBPKDmMwGQim.diag
[2025-12-14 22:51:30] -rw-r--r--. 1 boinc boinc     21008 Dec 14 22:51 stderr.txt
[2025-12-14 22:51:30] HITS file was successfully produced:
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc 223049176 Dec 14 22:47 shared/HITS.pool.root.1
[2025-12-14 22:51:30]  *** Contents of shared directory: ***
[2025-12-14 22:51:30] total 440004
[2025-12-14 22:51:30] -rw-r--r--. 2 boinc boinc 223427706 Dec 14 16:44 ATLAS.root_0
[2025-12-14 22:51:30] -rw-r--r--. 2 boinc boinc     15847 Dec 14 16:44 start_atlas.sh
[2025-12-14 22:51:30] -rw-r--r--. 2 boinc boinc    592393 Dec 14 16:44 input.tar.gz
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc 223049176 Dec 14 22:47 HITS.pool.root.1
[2025-12-14 22:51:30] -rw-------. 1 boinc boinc   3471360 Dec 14 22:51 result.tar.gz
22:51:32 (15006): run_atlas exited; CPU time 80739.688719
22:51:32 (15006): called boinc_finish(0)

</stderr_txt>
]]>

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