Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:38:46 (26108): wrapper (7.7.26015): starting
02:38:46 (26108): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 02:38:46] Arguments: --nthreads 12
[2025-12-14 02:38:46] Threads: 12
[2025-12-14 02:38:46] Checking for CVMFS
[2025-12-14 02:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 02:38:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 02:38:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 02:38:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 02:38:46] 2.11.2.0 2991 313266 94960 153988 3 59 16971057 20275200 1 130560 1 138422635 99.959 19093678 15414 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 02:38:46] CVMFS is ok
[2025-12-14 02:38:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 02:38:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 02:38:46] Further information can be found at the LHC@home message board.
[2025-12-14 02:38:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 02:38:46] Checking for apptainer binary...
[2025-12-14 02:38:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 02:38:46] Running /usr/bin/apptainer --version
[2025-12-14 02:38:46] apptainer version 1.3.2-1.el7
[2025-12-14 02:38:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 02:38:48] c-205-32.aglt2.org
[2025-12-14 02:38:48] apptainer works
[2025-12-14 02:38:48] Set ATHENA_PROC_NUMBER=12
[2025-12-14 02:38:48] Set ATHENA_CORE_NUMBER=12
[2025-12-14 02:38:48] Starting ATLAS job with PandaID=6929372614
[2025-12-14 02:38:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 04:13:18]  *** The last 200 lines of the pilot log: ***
[2025-12-14 04:13:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-14 04:13:18]  replicas=None
[2025-12-14 04:13:18]  scope=mc23_13p6TeV
[2025-12-14 04:13:18]  status=None
[2025-12-14 04:13:18]  status_code=0
[2025-12-14 04:13:18]  storage_token=
[2025-12-14 04:13:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929372614/log.47898836._001965.job.log.tgz.1
[2025-12-14 04:13:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/4a/log.47898836._001965.job.log.tgz.1
[2025-12-14 04:13:18]  workdir=None
[2025-12-14 04:13:18] ]
[2025-12-14 04:13:18] 2025-12-14 09:12:32,381 | INFO     | transferring file log.47898836._001965.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929372614/log.47898836._001965.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-14 04:13:18] 2025-12-14 09:12:32,382 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929372614/log.47898836._001965.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898836._001965.job
[2025-12-14 04:13:18] 2025-12-14 09:12:32,403 | INFO     | adding to output.list: log.47898836._001965.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/4a/log.47898836._001965.job.log.tg
[2025-12-14 04:13:18] 2025-12-14 09:12:32,404 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-14 04:13:18] 2025-12-14 09:12:32,404 | INFO     | summary of transferred files:
[2025-12-14 04:13:18] 2025-12-14 09:12:32,404 | INFO     |  -- lfn=log.47898836._001965.job.log.tgz.1, status_code=0, status=transferred
[2025-12-14 04:13:18] 2025-12-14 09:12:32,405 | INFO     | stage-out finished correctly
[2025-12-14 04:13:18] 2025-12-14 09:12:32,707 | INFO     | time since job start (5610s) is within the limit (174528.0s)
[2025-12-14 04:13:18] 2025-12-14 09:12:34,710 | INFO     | time since job start (5612s) is within the limit (174528.0s)
[2025-12-14 04:13:18] 2025-12-14 09:12:35,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-14 04:13:18] 2025-12-14 09:12:36,343 | WARNING  | process 3928 can no longer be monitored (due to stat problems) - aborting
[2025-12-14 04:13:18] 2025-12-14 09:12:36,344 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929372614/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 04:13:18] 2025-12-14 09:12:36,401 | INFO     | job 6929372614 has state=finished
[2025-12-14 04:13:18] 2025-12-14 09:12:36,401 | INFO     | preparing for final server update for job 6929372614 in state='finished'
[2025-12-14 04:13:18] 2025-12-14 09:12:36,402 | INFO     | this job has now completed (state=finished)
[2025-12-14 04:13:18] 2025-12-14 09:12:36,402 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-14 04:13:18] 2025-12-14 09:12:36,402 | INFO     | log transfer has been attempted: DONE
[2025-12-14 04:13:18] 2025-12-14 09:12:36,403 | INFO     | job 6929372614 has finished - writing final server update
[2025-12-14 04:13:18] 2025-12-14 09:12:36,403 | INFO     | total number of processed events: 400 (read)
[2025-12-14 04:13:18] 2025-12-14 09:12:36,404 | INFO     | executing command: lscpu
[2025-12-14 04:13:18] 2025-12-14 09:12:36,430 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 04:13:18] 2025-12-14 09:12:36,449 | INFO     | number of running child processes to parent process 3928: 1
[2025-12-14 04:13:18] 2025-12-14 09:12:36,449 | INFO     | maximum number of monitored processes: 6
[2025-12-14 04:13:18] 2025-12-14 09:12:36,716 | INFO     | time since job start (5614s) is within the limit (174528.0s)
[2025-12-14 04:13:18] 2025-12-14 09:12:38,721 | INFO     | time since job start (5616s) is within the limit (174528.0s)
[2025-12-14 04:13:18] 2025-12-14 09:12:38,953 | INFO     | monitor loop #418: job 0:6929372614 is in state 'finished'
[2025-12-14 04:13:18] 2025-12-14 09:12:38,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 04:13:18] 2025-12-14 09:12:40,726 | INFO     | time since job start (5618s) is within the limit (174528.0s)
[2025-12-14 04:13:18] 2025-12-14 09:12:40,984 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 04:13:18] 2025-12-14 09:12:40,987 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-14 04:13:18] 2025-12-14 09:12:40,990 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929372614/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 04:13:18] 2025-12-14 09:12:40,990 | INFO     | extracted standard info from prmon json
[2025-12-14 04:13:18] 2025-12-14 09:12:40,990 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 04:13:18] 2025-12-14 09:12:40,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 04:13:18] 2025-12-14 09:12:40,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 04:13:18] 2025-12-14 09:12:40,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 04:13:18] 2025-12-14 09:12:40,993 | INFO     | fitting pss+swap vs Time
[2025-12-14 04:13:18] 2025-12-14 09:12:40,993 | INFO     | sum of square deviations: 190403570.0
[2025-12-14 04:13:18] 2025-12-14 09:12:40,994 | INFO     | sum of deviations: -12685030520.0
[2025-12-14 04:13:18] 2025-12-14 09:12:40,994 | INFO     | mean x: 1765700838.0
[2025-12-14 04:13:18] 2025-12-14 09:12:40,994 | INFO     | mean y: 2784913.2588235294
[2025-12-14 04:13:18] 2025-12-14 09:12:40,994 | INFO     | intersect: 117636971179.93216
[2025-12-14 04:13:18] 2025-12-14 09:12:40,994 | INFO     | chi2: 0.09857829360110555
[2025-12-14 04:13:18] 2025-12-14 09:12:40,995 | INFO     | current memory leak: -66.62 B/s (using 85 data points, chi2=0.10)
[2025-12-14 04:13:18] 2025-12-14 09:12:40,995 | INFO     | could have reported an average CPU frequency of 2099 MHz (7 samples)
[2025-12-14 04:13:18] 2025-12-14 09:12:40,995 | INFO     | ..............................
[2025-12-14 04:13:18] 2025-12-14 09:12:40,995 | INFO     | . Timing measurements:
[2025-12-14 04:13:18] 2025-12-14 09:12:40,995 | INFO     | . get job = 0 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,995 | INFO     | . initial setup = 2 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,996 | INFO     | . payload setup = 6 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,996 | INFO     | . stage-in = 0 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,996 | INFO     | . payload execution = 5583 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,996 | INFO     | . stage-out = 0 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,996 | INFO     | . log creation = 0 s
[2025-12-14 04:13:18] 2025-12-14 09:12:40,996 | INFO     | ..............................
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | 
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | job summary report
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | --------------------------------------------------
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | PanDA job id: 6929372614
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | task id: 47898836
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | errors: (none)
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | pilot state: finished 
[2025-12-14 04:13:18] 2025-12-14 09:12:41,078 | INFO     | transexitcode: 0
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | exeerrorcode: 0
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | exeerrordiag: 
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | exitcode: 0
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | exitmsg: OK
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | cpuconsumptiontime: 61984 s
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | nevents: 400
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | neventsw: 0
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | pid: 3928
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | pgrp: 3928
[2025-12-14 04:13:18] 2025-12-14 09:12:41,079 | INFO     | corecount: 12
[2025-12-14 04:13:18] 2025-12-14 09:12:41,080 | INFO     | event service: False
[2025-12-14 04:13:18] 2025-12-14 09:12:41,080 | INFO     | sizes: {0: 2284006, 5: 2284268, 11: 2284324, 5593: 2310936, 5594: 2319934, 5597: 2319990, 5602: 2320312}
[2025-12-14 04:13:18] 2025-12-14 09:12:41,080 | INFO     | --------------------------------------------------
[2025-12-14 04:13:18] 2025-12-14 09:12:41,080 | INFO     | 
[2025-12-14 04:13:18] 2025-12-14 09:12:41,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 04:13:18] 2025-12-14 09:12:41,104 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,105 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,105 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 04:13:18] 2025-12-14 09:12:41,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 04:13:18] 2025-12-14 09:12:41,108 | INFO     | job 6929372614 has completed (purged errors)
[2025-12-14 04:13:18] 2025-12-14 09:12:41,108 | INFO     | overall cleanup function is called
[2025-12-14 04:13:18] 2025-12-14 09:12:42,116 | INFO     | --- collectZombieJob: --- 10, [3928]
[2025-12-14 04:13:18] 2025-12-14 09:12:42,116 | INFO     | zombie collector waiting for pid 3928
[2025-12-14 04:13:18] 2025-12-14 09:12:42,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 04:13:18] 2025-12-14 09:12:42,116 | INFO     | collected zombie processes
[2025-12-14 04:13:18] 2025-12-14 09:12:42,117 | INFO     | will attempt to kill all subprocesses of pid=3928
[2025-12-14 04:13:18] 2025-12-14 09:12:42,210 | INFO     | process IDs to be killed: [3928] (in reverse order)
[2025-12-14 04:13:18] 2025-12-14 09:12:42,329 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 04:13:18] 2025-12-14 09:12:42,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 04:13:18] 2025-12-14 09:12:42,333 | INFO     | did not find any defunct processes belonging to 3928
[2025-12-14 04:13:18] 2025-12-14 09:12:42,337 | INFO     | did not find any defunct processes belonging to 3928
[2025-12-14 04:13:18] 2025-12-14 09:12:42,337 | INFO     | ready for new job
[2025-12-14 04:13:18] 2025-12-14 09:12:42,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 04:13:18] 2025-12-14 09:12:42,339 | INFO     | ***************************************
[2025-12-14 04:13:18] 2025-12-14 09:12:42,339 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 04:13:18] 2025-12-14 09:12:42,339 | INFO     | ***************************************
[2025-12-14 04:13:18] 2025-12-14 09:12:42,339 | INFO     | 
[2025-12-14 04:13:18] 2025-12-14 09:12:42,340 | INFO     | architecture information:
[2025-12-14 04:13:18] 2025-12-14 09:12:42,340 | INFO     | executing command: cat /etc/os-release
[2025-12-14 04:13:18] 2025-12-14 09:12:42,355 | INFO     | cat /etc/os-release:
[2025-12-14 04:13:18] NAME="CentOS Linux"
[2025-12-14 04:13:18] VERSION="7 (Core)"
[2025-12-14 04:13:18] ID="centos"
[2025-12-14 04:13:18] ID_LIKE="rhel fedora"
[2025-12-14 04:13:18] VERSION_ID="7"
[2025-12-14 04:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 04:13:18] ANSI_COLOR="0;31"
[2025-12-14 04:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 04:13:18] HOME_URL="https://www.centos.org/"
[2025-12-14 04:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 04:13:18] 
[2025-12-14 04:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 04:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 04:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 04:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 04:13:18] 
[2025-12-14 04:13:18] 2025-12-14 09:12:42,355 | INFO     | ***************************************
[2025-12-14 04:13:18] 2025-12-14 09:12:42,858 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 04:13:18] 2025-12-14 09:12:42,875 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-12-14 04:13:18] 2025-12-14 09:12:42,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 04:13:18] 2025-12-14 09:12:42,876 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 04:13:18] 2025-12-14 09:12:42,876 | INFO     | update_server=False
[2025-12-14 04:13:18] 2025-12-14 09:12:42,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 04:13:18] 2025-12-14 09:12:42,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 04:13:18] 2025-12-14 09:12:42,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 04:13:18] 2025-12-14 09:12:42,877 | INFO     | aborting loop
[2025-12-14 04:13:18] 2025-12-14 09:12:42,938 | INFO     | all data control threads have been joined
[2025-12-14 04:13:18] 2025-12-14 09:12:43,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 04:13:18] 2025-12-14 09:12:43,441 | INFO     | all job control threads have been joined
[2025-12-14 04:13:18] 2025-12-14 09:12:43,881 | INFO     | [job] queue monitor thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:43,881 | INFO     | [job] retrieve thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:43,882 | INFO     | [job] job monitor thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:43,944 | INFO     | [data] control thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:44,171 | INFO     | [job] validate thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:44,231 | INFO     | all payload control threads have been joined
[2025-12-14 04:13:18] 2025-12-14 09:12:44,253 | INFO     | [payload] failed_post thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:44,398 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:44,446 | INFO     | [job] control thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:44,591 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:44,926 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:45,003 | INFO     | [data] copytool_out thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:45,050 | INFO     | [data] copytool_in thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:45,236 | INFO     | [payload] control thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:45,475 | INFO     | [payload] validate_post thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:46,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 04:13:18] 2025-12-14 09:12:50,023 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:12:53,615 | INFO     | job.realtimelogging is not enabled
[2025-12-14 04:13:18] 2025-12-14 09:12:54,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 04:13:18] 2025-12-14 09:13:11,099 | INFO     | [monitor] cgroup control has ended
[2025-12-14 04:13:18] 2025-12-14 09:13:12,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602393769792)>', '<ExcThread(monitor, started 140602096203520)>']
[2025-12-14 04:13:18] 2025-12-14 09:13:13,929 | INFO     | PID=29779 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 04:13:18] 2025-12-14 09:13:13,929 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 04:13:18] 2025-12-14 09:13:13,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 04:13:18] 2025-12-14 09:13:13,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 04:13:18] 2025-12-14 09:13:13,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 04:13:18] 2025-12-14 09:13:13,930 | INFO     | [monitor] control thread has ended
[2025-12-14 04:13:18] 2025-12-14 09:13:17,814 | INFO     | all workflow threads have been joined
[2025-12-14 04:13:18] 2025-12-14 09:13:17,814 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 04:13:18] 2025-12-14 09:13:17,815 | INFO     | traces error code: 0
[2025-12-14 04:13:18] 2025-12-14 09:13:17,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 04:13:18] 2025-12-14 09:13:17,899 [wrapper] ==== pilot stdout END ====
[2025-12-14 04:13:18] 2025-12-14 09:13:17,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 04:13:18] 2025-12-14 09:13:17,906 [wrapper] pilotpid: 29779
[2025-12-14 04:13:18] 2025-12-14 09:13:17,910 [wrapper] Pilot exit status: 0
[2025-12-14 04:13:18] 2025-12-14 09:13:17,924 [wrapper] pandaids: 6929372614
[2025-12-14 04:13:18] 2025-12-14 09:13:17,963 [wrapper] cleanup supervisor_pilot  4834 29780
[2025-12-14 04:13:18] 2025-12-14 09:13:17,967 [wrapper] Test setup, not cleaning
[2025-12-14 04:13:18] 2025-12-14 09:13:17,971 [wrapper] apfmon messages muted
[2025-12-14 04:13:18] 2025-12-14 09:13:17,975 [wrapper] ==== wrapper stdout END ====
[2025-12-14 04:13:18] 2025-12-14 09:13:17,978 [wrapper] ==== wrapper stderr END ====
[2025-12-14 04:13:18]  *** Error codes and diagnostics ***
[2025-12-14 04:13:18]     "exeErrorCode": 0,
[2025-12-14 04:13:18]     "exeErrorDiag": "",
[2025-12-14 04:13:18]     "pilotErrorCode": 0,
[2025-12-14 04:13:18]     "pilotErrorDiag": "",
[2025-12-14 04:13:18]  *** Listing of results directory ***
[2025-12-14 04:13:18] total 403932
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 20:02 pilot3.tar.gz
[2025-12-14 04:13:18] -rwx------ 1 boincer umatlas     36322 Dec 13 20:03 runpilot2-wrapper.sh
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 20:05 queuedata.json
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas       100 Dec 14 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 04:13:18] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 02:38 run_atlas
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas       105 Dec 14 02:38 job.xml
[2025-12-14 04:13:18] -rw-r--r-- 2 boincer umatlas 215576598 Dec 14 02:38 EVNT.47898833._000059.pool.root.1
[2025-12-14 04:13:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 02:38 start_atlas.sh
[2025-12-14 04:13:18] drwxrwx--x 2 boincer umatlas      4096 Dec 14 02:38 shared
[2025-12-14 04:13:18] -rw-r--r-- 2 boincer umatlas    592400 Dec 14 02:38 input.tar.gz
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas         0 Dec 14 02:38 boinc_lockfile
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas      2549 Dec 14 02:38 pandaJob.out
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas        57 Dec 14 02:38 setup.sh.local
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas    991728 Dec 14 02:39 agis_schedconf.cvmfs.json
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas   1516240 Dec 14 02:39 agis_ddmendpoints.agis.ALL.json
[2025-12-14 04:13:18] drwx------ 5 boincer umatlas      4096 Dec 14 02:39 pilot3
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas      5952 Dec 14 04:03 init_data.xml
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas 191715903 Dec 14 04:12 HITS.47898836._001965.pool.root.1
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas        95 Dec 14 04:12 pilot_heartbeat.json
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas       530 Dec 14 04:12 boinc_task_state.xml
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas      1045 Dec 14 04:12 memory_monitor_summary.json
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas    401561 Dec 14 04:12 log.47898836._001965.job.log.tgz.1
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas      7848 Dec 14 04:12 heartbeat.json
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 04:12 boinc_mmap_file
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas        27 Dec 14 04:12 wrapper_checkpoint.txt
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas      4818 Dec 14 04:13 pilotlog.txt
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas    803175 Dec 14 04:13 log.47898836._001965.job.log.1
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas       357 Dec 14 04:13 output.list
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas       620 Dec 14 04:13 runtime_log
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas   1228800 Dec 14 04:13 result.tar.gz
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas       659 Dec 14 04:13 ybhNDmnhpo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFbUKDm4Dqrem.diag
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas      9344 Dec 14 04:13 runtime_log.err
[2025-12-14 04:13:18] -rw-r--r-- 1 boincer umatlas     21898 Dec 14 04:13 stderr.txt
[2025-12-14 04:13:18] HITS file was successfully produced:
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas 191715903 Dec 14 04:12 shared/HITS.pool.root.1
[2025-12-14 04:13:18]  *** Contents of shared directory: ***
[2025-12-14 04:13:18] total 399548
[2025-12-14 04:13:18] -rw-r--r-- 2 boincer umatlas 215576598 Dec 14 02:38 ATLAS.root_0
[2025-12-14 04:13:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 02:38 start_atlas.sh
[2025-12-14 04:13:18] -rw-r--r-- 2 boincer umatlas    592400 Dec 14 02:38 input.tar.gz
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas 191715903 Dec 14 04:12 HITS.pool.root.1
[2025-12-14 04:13:18] -rw------- 1 boincer umatlas   1228800 Dec 14 04:13 result.tar.gz
04:13:20 (26108): run_atlas exited; CPU time 61967.177645
04:13:20 (26108): called boinc_finish(0)

</stderr_txt>
]]>

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