Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:07:50 (2191111): wrapper (7.7.26015): starting
23:07:50 (2191111): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 23:07:50] Arguments: --nthreads 12
[2025-12-13 23:07:50] Threads: 12
[2025-12-13 23:07:50] Checking for CVMFS
[2025-12-13 23:07:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 23:07:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 23:07:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 23:07:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 23:07:51] 2.11.5.0 94007 53853 305812 153986 1 841 36733175 45568000 15853 130560 0 438900696 99.772 284676229 25527 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-12-13 23:07:51] CVMFS is ok
[2025-12-13 23:07:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 23:07:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 23:07:51] Further information can be found at the LHC@home message board.
[2025-12-13 23:07:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 23:07:51] Checking for apptainer binary...
[2025-12-13 23:07:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 23:07:51] Running /usr/bin/apptainer --version
[2025-12-13 23:07:51] apptainer version 1.4.1-1.el9
[2025-12-13 23:07:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 23:07:51] wns0032.triumf.lcg
[2025-12-13 23:07:51] apptainer works
[2025-12-13 23:07:51] Set ATHENA_PROC_NUMBER=12
[2025-12-13 23:07:51] Set ATHENA_CORE_NUMBER=12
[2025-12-13 23:07:51] Starting ATLAS job with PandaID=6929396929
[2025-12-13 23:07:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 23:11:16]  *** The last 200 lines of the pilot log: ***
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | WARNING  | wrong length of table data, x=[1765696108.0], y=[1133.0] (must be same and length>=4)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | could have reported an average CPU frequency of 2638 MHz (4 samples)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | ..............................
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . Timing measurements:
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . get job = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . initial setup = 2 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . payload setup = 5 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . stage-in = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . payload execution = 14 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . stage-out = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . log creation = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | ..............................
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 23:11:16] 2025-12-14 07:10:44,349 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929396929/pilotlog.txt
[2025-12-13 23:11:16] 2025-12-14 07:10:44,358 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 23:11:16] - Log from pilotlog.txt -
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | found no stored workdir sizes
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | WARNING  | wrong length of table data, x=[1765696108.0], y=[1133.0] (must be same and length>=4)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | could have reported an average CPU frequency of 2638 MHz (4 samples)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | ..............................
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . Timing measurements:
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . get job = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . initial setup = 2 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . payload setup = 5 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . stage-in = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . payload execution = 14 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . stage-out = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . log creation = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | ..............................
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 23:11:16] 2025-12-14 07:10:44,349 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929396929/pilotlog.txt
[2025-12-13 23:11:16] 2025-12-14 07:10:44,358 | WARNING  | 
[2025-12-13 23:11:16] [begin log extracts]
[2025-12-13 23:11:16] - Log from pilotlog.txt -
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | WARNING  | found no stored workdir sizes
[2025-12-13 23:11:16] 2025-12-14 07:10:44,347 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | WARNING  | wrong length of table data, x=[1765696108.0], y=[1133.0] (must be same and length>=4)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | could have reported an average CPU frequency of 2638 MHz (4 samples)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | ..............................
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . Timing measurements:
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . get job = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . initial setup = 2 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . payload setup = 5 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . stage-in = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . payload execution = 14 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . stage-out = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | . log creation = 0 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | ..............................
[2025-12-13 23:11:16] 2025-12-14 07:10:44,348 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 23:11:16] 2025-12-14 07:10:44,349 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929396929/pilotlog.txt
[2025-12-13 23:11:16] [end log extracts]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,358 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,359 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | 
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | job summary report
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | --------------------------------------------------
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | PanDA job id: 6929396929
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | task id: 47886831
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 23:08:35,069 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | pilot state: failed 
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | transexitcode: 65
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | exeerrorcode: 65
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | exitcode: 65
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | cpuconsumptiontime: 20 s
[2025-12-13 23:11:16] 2025-12-14 07:10:44,831 | INFO     | nevents: 0
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | neventsw: 0
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | pid: 2202417
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | pgrp: 2202417
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | corecount: 12
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | event service: False
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | sizes: {0: 2283109, 1: 2283962, 6: 2284224, 11: 2284252, 23: 2307371, 24: 2307347, 25: 2311795, 26: 2311823, 145: 2311989}
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | --------------------------------------------------
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | 
[2025-12-13 23:11:16] 2025-12-14 07:10:44,832 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | job 6929396929 has completed (purged errors)
[2025-12-13 23:11:16] 2025-12-14 07:10:44,848 | INFO     | overall cleanup function is called
[2025-12-13 23:11:16] 2025-12-14 07:10:45,855 | INFO     | --- collectZombieJob: --- 10, [2202417]
[2025-12-13 23:11:16] 2025-12-14 07:10:45,855 | INFO     | zombie collector waiting for pid 2202417
[2025-12-13 23:11:16] 2025-12-14 07:10:45,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 23:11:16] 2025-12-14 07:10:45,856 | INFO     | collected zombie processes
[2025-12-13 23:11:16] 2025-12-14 07:10:45,856 | INFO     | will attempt to kill all subprocesses of pid=2202417
[2025-12-13 23:11:16] 2025-12-14 07:10:46,026 | INFO     | process IDs to be killed: [2202417] (in reverse order)
[2025-12-13 23:11:16] 2025-12-14 07:10:46,093 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 23:11:16] 2025-12-14 07:10:46,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 23:11:16] 2025-12-14 07:10:46,100 | INFO     | did not find any defunct processes belonging to 2202417
[2025-12-13 23:11:16] 2025-12-14 07:10:46,107 | INFO     | did not find any defunct processes belonging to 2202417
[2025-12-13 23:11:16] 2025-12-14 07:10:46,107 | INFO     | ready for new job
[2025-12-13 23:11:16] 2025-12-14 07:10:46,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 23:11:16] 2025-12-14 07:10:46,109 | INFO     | ***************************************
[2025-12-13 23:11:16] 2025-12-14 07:10:46,109 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 23:11:16] 2025-12-14 07:10:46,109 | INFO     | ***************************************
[2025-12-13 23:11:16] 2025-12-14 07:10:46,109 | INFO     | 
[2025-12-13 23:11:16] 2025-12-14 07:10:46,111 | INFO     | architecture information:
[2025-12-13 23:11:16] 2025-12-14 07:10:46,111 | INFO     | executing command: cat /etc/os-release
[2025-12-13 23:11:16] 2025-12-14 07:10:46,120 | INFO     | cat /etc/os-release:
[2025-12-13 23:11:16] NAME="CentOS Linux"
[2025-12-13 23:11:16] VERSION="7 (Core)"
[2025-12-13 23:11:16] ID="centos"
[2025-12-13 23:11:16] ID_LIKE="rhel fedora"
[2025-12-13 23:11:16] VERSION_ID="7"
[2025-12-13 23:11:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 23:11:16] ANSI_COLOR="0;31"
[2025-12-13 23:11:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 23:11:16] HOME_URL="https://www.centos.org/"
[2025-12-13 23:11:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 23:11:16] 
[2025-12-13 23:11:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 23:11:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 23:11:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 23:11:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 23:11:16] 
[2025-12-13 23:11:16] 2025-12-14 07:10:46,121 | INFO     | ***************************************
[2025-12-13 23:11:16] 2025-12-14 07:10:46,623 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 23:11:16] 2025-12-14 07:10:46,634 | INFO     | sufficient remaining disk space (1926593773568 B)
[2025-12-13 23:11:16] 2025-12-14 07:10:46,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 23:11:16] 2025-12-14 07:10:46,634 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 23:11:16] 2025-12-14 07:10:46,635 | INFO     | update_server=False
[2025-12-13 23:11:16] 2025-12-14 07:10:46,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 23:11:16] 2025-12-14 07:10:46,726 | INFO     | all data control threads have been joined
[2025-12-13 23:11:16] 2025-12-14 07:10:46,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 23:11:16] 2025-12-14 07:10:46,984 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 23:11:16] 2025-12-14 07:10:46,984 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 23:11:16] 2025-12-14 07:10:46,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 23:11:16] 2025-12-14 07:10:46,984 | INFO     | will abort loop
[2025-12-13 23:11:16] 2025-12-14 07:10:47,638 | INFO     | [job] retrieve thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:47,674 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:47,732 | INFO     | [data] control thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:47,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:47,800 | INFO     | all job control threads have been joined
[2025-12-13 23:11:16] 2025-12-14 07:10:47,830 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:47,839 | INFO     | all payload control threads have been joined
[2025-12-13 23:11:16] 2025-12-14 07:10:47,989 | INFO     | [job] job monitor thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,151 | INFO     | [payload] validate_post thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 23:11:16] 2025-12-14 07:10:48,316 | INFO     | [data] copytool_in thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,662 | INFO     | [payload] failed_post thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,805 | INFO     | [job] control thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,844 | INFO     | [payload] control thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,919 | INFO     | [data] copytool_out thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:48,951 | INFO     | [job] validate thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:49,058 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:49,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 23:11:16] 2025-12-14 07:10:50,437 | INFO     | [job] queue monitor thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:10:52,160 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 23:11:16] 2025-12-14 07:11:02,214 | INFO     | [monitor] cgroup control has ended
[2025-12-13 23:11:16] 2025-12-14 07:11:02,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478876718912)>', '<ExcThread(monitor, started 140478464890624)>']
[2025-12-13 23:11:16] 2025-12-14 07:11:07,393 | INFO     | all workflow threads have been joined
[2025-12-13 23:11:16] 2025-12-14 07:11:07,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 23:11:16] 2025-12-14 07:11:07,394 | INFO     | traces error code: 0
[2025-12-13 23:11:16] 2025-12-14 07:11:07,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 23:11:16] 2025-12-14 07:11:16,315 | INFO     | PID=2194777 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 23:11:16] 2025-12-14 07:11:16,316 | INFO     | .. there are 27 such processes running
[2025-12-13 23:11:16] 2025-12-14 07:11:16,317 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 23:11:16] 2025-12-14 07:11:16,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 23:11:16] 2025-12-14 07:11:16,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 23:11:16] 2025-12-14 07:11:16,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 23:11:16] 2025-12-14 07:11:16,317 | INFO     | [monitor] control thread has ended
[2025-12-13 23:11:16] 2025-12-14 07:11:16,427 [wrapper] ==== pilot stdout END ====
[2025-12-13 23:11:16] 2025-12-14 07:11:16,429 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 23:11:16] 2025-12-14 07:11:16,431 [wrapper] pilotpid: 2194777
[2025-12-13 23:11:16] 2025-12-14 07:11:16,433 [wrapper] Pilot exit status: 0
[2025-12-13 23:11:16] 2025-12-14 07:11:16,439 [wrapper] pandaids: 6929396929
[2025-12-13 23:11:16] 2025-12-14 07:11:16,479 [wrapper] cleanup supervisor_pilot 2194783 2194778
[2025-12-13 23:11:16] 2025-12-14 07:11:16,481 [wrapper] Test setup, not cleaning
[2025-12-13 23:11:16] 2025-12-14 07:11:16,483 [wrapper] apfmon messages muted
[2025-12-13 23:11:16] 2025-12-14 07:11:16,484 [wrapper] ==== wrapper stdout END ====
[2025-12-13 23:11:16] 2025-12-14 07:11:16,486 [wrapper] ==== wrapper stderr END ====
[2025-12-13 23:11:16]  *** Error codes and diagnostics ***
[2025-12-13 23:11:16]     "exeErrorCode": 65,
[2025-12-13 23:11:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 23:11:16]     "pilotErrorCode": 1305,
[2025-12-13 23:11:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 23:11:16]  *** Listing of results directory ***
[2025-12-13 23:11:16] total 192100
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc    579449 Dec 13 17:02 pilot3.tar.gz
[2025-12-13 23:11:16] -rwx------. 1 boinc boinc     36322 Dec 13 17:03 runpilot2-wrapper.sh
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc      5112 Dec 13 17:03 queuedata.json
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc       100 Dec 13 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 23:11:16] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 23:07 run_atlas
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc       105 Dec 13 23:07 job.xml
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc      6595 Dec 13 23:07 init_data.xml
[2025-12-13 23:11:16] -rw-r--r--. 2 boinc boinc 192587823 Dec 13 23:07 EVNT.47886829._000061.pool.root.1
[2025-12-13 23:11:16] -rw-r--r--. 2 boinc boinc     15847 Dec 13 23:07 start_atlas.sh
[2025-12-13 23:11:16] drwxrwx--x. 2 boinc boinc      4096 Dec 13 23:07 shared
[2025-12-13 23:11:16] -rw-r--r--. 2 boinc boinc    592414 Dec 13 23:07 input.tar.gz
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc         0 Dec 13 23:07 boinc_lockfile
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc      2536 Dec 13 23:07 pandaJob.out
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc    991736 Dec 13 23:07 agis_schedconf.cvmfs.json
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc   1516240 Dec 13 23:08 agis_ddmendpoints.agis.ALL.json
[2025-12-13 23:11:16] drwx------. 5 boinc boinc      4096 Dec 13 23:08 pilot3
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc       958 Dec 13 23:08 memory_monitor_summary.json
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc     20844 Dec 13 23:08 log.47886831._006294.job.log.tgz.1
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc      8371 Dec 13 23:10 heartbeat.json
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc       523 Dec 13 23:11 boinc_task_state.xml
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc        22 Dec 13 23:11 wrapper_checkpoint.txt
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc      8192 Dec 13 23:11 boinc_mmap_file
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc        95 Dec 13 23:11 pilot_heartbeat.json
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc       823 Dec 13 23:11 pilotlog.txt
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc     82987 Dec 13 23:11 log.47886831._006294.job.log.1
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc       188 Dec 13 23:11 output.list
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc       620 Dec 13 23:11 runtime_log
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc    122880 Dec 13 23:11 result.tar.gz
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc      8636 Dec 13 23:11 runtime_log.err
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc       645 Dec 13 23:11 BJKLDmRhpo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNXUKDmYM1fGm.diag
[2025-12-13 23:11:16] -rw-r--r--. 1 boinc boinc     21700 Dec 13 23:11 stderr.txt
[2025-12-13 23:11:16] No HITS result produced
[2025-12-13 23:11:16]  *** Contents of shared directory: ***
[2025-12-13 23:11:16] total 188796
[2025-12-13 23:11:16] -rw-r--r--. 2 boinc boinc 192587823 Dec 13 23:07 ATLAS.root_0
[2025-12-13 23:11:16] -rw-r--r--. 2 boinc boinc     15847 Dec 13 23:07 start_atlas.sh
[2025-12-13 23:11:16] -rw-r--r--. 2 boinc boinc    592414 Dec 13 23:07 input.tar.gz
[2025-12-13 23:11:16] -rw-------. 1 boinc boinc    122880 Dec 13 23:11 result.tar.gz
23:11:17 (2191111): run_atlas exited; CPU time 21.133154
23:11:17 (2191111): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN