Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:44:07 (25392): wrapper (7.7.26015): starting
01:44:07 (25392): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 01:44:07] Arguments: --nthreads 8
[2025-12-14 01:44:07] Threads: 8
[2025-12-14 01:44:07] Checking for CVMFS
[2025-12-14 01:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 01:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 01:44:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 01:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 01:44:08] 2.11.2.0 11495 143276 137772 153986 0 57 15791535 18432000 917 130560 0 99892379 99.977 5820173 26423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 01:44:08] CVMFS is ok
[2025-12-14 01:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 01:44:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 01:44:08] Further information can be found at the LHC@home message board.
[2025-12-14 01:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 01:44:08] Checking for apptainer binary...
[2025-12-14 01:44:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 01:44:08] Running /usr/bin/apptainer --version
[2025-12-14 01:44:08] apptainer version 1.3.2-1.el7
[2025-12-14 01:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 01:44:09] c-206-31.aglt2.org
[2025-12-14 01:44:09] apptainer works
[2025-12-14 01:44:09] Set ATHENA_PROC_NUMBER=8
[2025-12-14 01:44:09] Set ATHENA_CORE_NUMBER=8
[2025-12-14 01:44:09] Starting ATLAS job with PandaID=6929343784
[2025-12-14 01:44:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 04:57:58]  *** The last 200 lines of the pilot log: ***
[2025-12-14 04:57:58] 2025-12-14 09:57:26,278 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2461.2916666666665
[2025-12-14 04:57:58] 2025-12-14 09:57:26,282 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929343784/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,283 | INFO     | extracted standard info from prmon json
[2025-12-14 04:57:58] 2025-12-14 09:57:26,283 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 04:57:58] 2025-12-14 09:57:26,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 04:57:58] 2025-12-14 09:57:26,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 04:57:58] 2025-12-14 09:57:26,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 04:57:58] 2025-12-14 09:57:26,289 | INFO     | fitting pss+swap vs Time
[2025-12-14 04:57:58] 2025-12-14 09:57:26,289 | INFO     | sum of square deviations: 2126802667.5
[2025-12-14 04:57:58] 2025-12-14 09:57:26,291 | INFO     | sum of deviations: 15093548908.000002
[2025-12-14 04:57:58] 2025-12-14 09:57:26,291 | INFO     | mean x: 1765700452.5
[2025-12-14 04:57:58] 2025-12-14 09:57:26,291 | INFO     | mean y: 2437547.0736842104
[2025-12-14 04:57:58] 2025-12-14 09:57:26,292 | INFO     | intersect: -12528431698.07996
[2025-12-14 04:57:58] 2025-12-14 09:57:26,292 | INFO     | chi2: 2.0843433316289093
[2025-12-14 04:57:58] 2025-12-14 09:57:26,292 | INFO     | sum of square deviations: 1963274020.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,294 | INFO     | sum of deviations: 27206894016.000004
[2025-12-14 04:57:58] 2025-12-14 09:57:26,294 | INFO     | mean x: 1765700300.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,294 | INFO     | mean y: 2448586.9243243244
[2025-12-14 04:57:58] 2025-12-14 09:57:26,295 | INFO     | intersect: -24466484652.522
[2025-12-14 04:57:58] 2025-12-14 09:57:26,295 | INFO     | chi2: 1.2499359158195493
[2025-12-14 04:57:58] 2025-12-14 09:57:26,295 | INFO     | current chi2=1.2499359158195493 (change=40.03214840605327 %)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,296 | INFO     | sum of square deviations: 1808350185.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,297 | INFO     | sum of deviations: 26147989312.499996
[2025-12-14 04:57:58] 2025-12-14 09:57:26,297 | INFO     | mean x: 1765700147.5
[2025-12-14 04:57:58] 2025-12-14 09:57:26,298 | INFO     | mean y: 2447543.7722222223
[2025-12-14 04:57:58] 2025-12-14 09:57:26,298 | INFO     | intersect: -25528840018.160736
[2025-12-14 04:57:58] 2025-12-14 09:57:26,298 | INFO     | chi2: 1.2506982590995226
[2025-12-14 04:57:58] 2025-12-14 09:57:26,298 | INFO     | current chi2=1.2506982590995226 (change=-0.060990589223401705 %)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,299 | INFO     | right removable region: 179
[2025-12-14 04:57:58] 2025-12-14 09:57:26,299 | INFO     | sum of square deviations: 1963274020.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,301 | INFO     | sum of deviations: -9803764022.999998
[2025-12-14 04:57:58] 2025-12-14 09:57:26,301 | INFO     | mean x: 1765700605.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,301 | INFO     | mean y: 2460475.243243243
[2025-12-14 04:57:58] 2025-12-14 09:57:26,301 | INFO     | intersect: 8819626031.52577
[2025-12-14 04:57:58] 2025-12-14 09:57:26,302 | INFO     | chi2: 0.8755869230572433
[2025-12-14 04:57:58] 2025-12-14 09:57:26,302 | INFO     | current chi2=0.8755869230572433 (change=57.992193043697156 %)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,302 | INFO     | sum of square deviations: 1808350185.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,304 | INFO     | sum of deviations: -10373510458.499998
[2025-12-14 04:57:58] 2025-12-14 09:57:26,304 | INFO     | mean x: 1765700757.5
[2025-12-14 04:57:58] 2025-12-14 09:57:26,304 | INFO     | mean y: 2460998.05
[2025-12-14 04:57:58] 2025-12-14 09:57:26,304 | INFO     | intersect: 10131315147.22997
[2025-12-14 04:57:58] 2025-12-14 09:57:26,305 | INFO     | chi2: 0.8650957286490327
[2025-12-14 04:57:58] 2025-12-14 09:57:26,305 | INFO     | current chi2=0.8650957286490327 (change=1.1981899377367327 %)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,305 | INFO     | left removable region: 20
[2025-12-14 04:57:58] 2025-12-14 09:57:26,306 | INFO     | sum of square deviations: 1246386160.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,307 | INFO     | sum of deviations: 4568528876.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,307 | INFO     | mean x: 1765700727.0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,307 | INFO     | mean y: 2468892.182389937
[2025-12-14 04:57:58] 2025-12-14 09:57:26,307 | INFO     | intersect: -6469566032.911525
[2025-12-14 04:57:58] 2025-12-14 09:57:26,308 | INFO     | chi2: 0.00019026929538911344
[2025-12-14 04:57:58] 2025-12-14 09:57:26,308 | INFO     | current memory leak: 3.67 B/s (using 159 data points, chi2=0.00)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,309 | INFO     | could have reported an average CPU frequency of 2365 MHz (10 samples)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,309 | INFO     | ..............................
[2025-12-14 04:57:58] 2025-12-14 09:57:26,309 | INFO     | . Timing measurements:
[2025-12-14 04:57:58] 2025-12-14 09:57:26,309 | INFO     | . get job = 1 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,310 | INFO     | . initial setup = 2 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,310 | INFO     | . payload setup = 4 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,310 | INFO     | . stage-in = 0 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,310 | INFO     | . payload execution = 11549 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,310 | INFO     | . stage-out = 2 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,310 | INFO     | . log creation = 0 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,311 | INFO     | ..............................
[2025-12-14 04:57:58] 2025-12-14 09:57:26,437 | INFO     | 
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | job summary report
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | --------------------------------------------------
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | PanDA job id: 6929343784
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | task id: 47886831
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | errors: (none)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | pilot state: finished 
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | transexitcode: 0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | exeerrorcode: 0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,438 | INFO     | exeerrordiag: 
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | exitcode: 0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | exitmsg: OK
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | cpuconsumptiontime: 87264 s
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | nevents: 400
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | neventsw: 0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | pid: 8375
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | pgrp: 8375
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | corecount: 8
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | event service: False
[2025-12-14 04:57:58] 2025-12-14 09:57:26,439 | INFO     | sizes: {0: 2283818, 1: 2284017, 6: 2284279, 11: 2284307, 11558: 2313674, 11562: 2322672, 11563: 2322856, 11568: 2323050}
[2025-12-14 04:57:58] 2025-12-14 09:57:26,440 | INFO     | --------------------------------------------------
[2025-12-14 04:57:58] 2025-12-14 09:57:26,440 | INFO     | 
[2025-12-14 04:57:58] 2025-12-14 09:57:26,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 04:57:58] 2025-12-14 09:57:26,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 04:57:58] 2025-12-14 09:57:26,467 | INFO     | job 6929343784 has completed (purged errors)
[2025-12-14 04:57:58] 2025-12-14 09:57:26,468 | INFO     | overall cleanup function is called
[2025-12-14 04:57:58] 2025-12-14 09:57:27,476 | INFO     | --- collectZombieJob: --- 10, [8375]
[2025-12-14 04:57:58] 2025-12-14 09:57:27,476 | INFO     | zombie collector waiting for pid 8375
[2025-12-14 04:57:58] 2025-12-14 09:57:27,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 04:57:58] 2025-12-14 09:57:27,476 | INFO     | collected zombie processes
[2025-12-14 04:57:58] 2025-12-14 09:57:27,476 | INFO     | will attempt to kill all subprocesses of pid=8375
[2025-12-14 04:57:58] 2025-12-14 09:57:27,609 | INFO     | process IDs to be killed: [8375] (in reverse order)
[2025-12-14 04:57:58] 2025-12-14 09:57:27,646 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 04:57:58] 2025-12-14 09:57:27,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 04:57:58] 2025-12-14 09:57:27,649 | INFO     | did not find any defunct processes belonging to 8375
[2025-12-14 04:57:58] 2025-12-14 09:57:27,652 | INFO     | did not find any defunct processes belonging to 8375
[2025-12-14 04:57:58] 2025-12-14 09:57:27,652 | INFO     | ready for new job
[2025-12-14 04:57:58] 2025-12-14 09:57:27,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 04:57:58] 2025-12-14 09:57:27,654 | INFO     | ***************************************
[2025-12-14 04:57:58] 2025-12-14 09:57:27,654 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 04:57:58] 2025-12-14 09:57:27,654 | INFO     | ***************************************
[2025-12-14 04:57:58] 2025-12-14 09:57:27,654 | INFO     | 
[2025-12-14 04:57:58] 2025-12-14 09:57:27,655 | INFO     | architecture information:
[2025-12-14 04:57:58] 2025-12-14 09:57:27,655 | INFO     | executing command: cat /etc/os-release
[2025-12-14 04:57:58] 2025-12-14 09:57:27,664 | INFO     | cat /etc/os-release:
[2025-12-14 04:57:58] NAME="CentOS Linux"
[2025-12-14 04:57:58] VERSION="7 (Core)"
[2025-12-14 04:57:58] ID="centos"
[2025-12-14 04:57:58] ID_LIKE="rhel fedora"
[2025-12-14 04:57:58] VERSION_ID="7"
[2025-12-14 04:57:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 04:57:58] ANSI_COLOR="0;31"
[2025-12-14 04:57:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 04:57:58] HOME_URL="https://www.centos.org/"
[2025-12-14 04:57:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 04:57:58] 
[2025-12-14 04:57:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 04:57:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 04:57:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 04:57:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 04:57:58] 
[2025-12-14 04:57:58] 2025-12-14 09:57:27,665 | INFO     | ***************************************
[2025-12-14 04:57:58] 2025-12-14 09:57:28,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 04:57:58] 2025-12-14 09:57:28,177 | INFO     | sufficient remaining disk space (28517072896 B)
[2025-12-14 04:57:58] 2025-12-14 09:57:28,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 04:57:58] 2025-12-14 09:57:28,178 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 04:57:58] 2025-12-14 09:57:28,178 | INFO     | update_server=False
[2025-12-14 04:57:58] 2025-12-14 09:57:28,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 04:57:58] 2025-12-14 09:57:28,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 04:57:58] 2025-12-14 09:57:28,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 04:57:58] 2025-12-14 09:57:28,246 | INFO     | all payload control threads have been joined
[2025-12-14 04:57:58] 2025-12-14 09:57:28,468 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 04:57:58] 2025-12-14 09:57:28,468 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 04:57:58] 2025-12-14 09:57:28,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 04:57:58] 2025-12-14 09:57:28,469 | INFO     | will abort loop
[2025-12-14 04:57:58] 2025-12-14 09:57:28,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 04:57:58] 2025-12-14 09:57:28,841 | INFO     | all data control threads have been joined
[2025-12-14 04:57:58] 2025-12-14 09:57:29,183 | INFO     | [job] retrieve thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,185 | INFO     | [job] queue monitor thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,251 | INFO     | [payload] control thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,257 | INFO     | all job control threads have been joined
[2025-12-14 04:57:58] 2025-12-14 09:57:29,474 | INFO     | [job] job monitor thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,549 | INFO     | [payload] validate_post thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,816 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,846 | INFO     | [data] control thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,965 | INFO     | [data] copytool_in thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,968 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:29,974 | INFO     | [job] validate thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:30,258 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:30,263 | INFO     | [job] control thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:30,486 | INFO     | [data] copytool_out thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:30,630 | INFO     | [payload] failed_post thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:32,184 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:38,754 | INFO     | job.realtimelogging is not enabled
[2025-12-14 04:57:58] 2025-12-14 09:57:39,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 04:57:58] 2025-12-14 09:57:41,628 | INFO     | [monitor] cgroup control has ended
[2025-12-14 04:57:58] 2025-12-14 09:57:42,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069399910208)>', '<ExcThread(monitor, started 140068572342016)>']
[2025-12-14 04:57:58] 2025-12-14 09:57:47,034 | INFO     | all workflow threads have been joined
[2025-12-14 04:57:58] 2025-12-14 09:57:47,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 04:57:58] 2025-12-14 09:57:47,035 | INFO     | traces error code: 0
[2025-12-14 04:57:58] 2025-12-14 09:57:47,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 04:57:58] 2025-12-14 09:57:58,420 | INFO     | PID=29107 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 04:57:58] 2025-12-14 09:57:58,420 | INFO     | .. there are 3 such processes running
[2025-12-14 04:57:58] 2025-12-14 09:57:58,420 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 04:57:58] 2025-12-14 09:57:58,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 04:57:58] 2025-12-14 09:57:58,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 04:57:58] 2025-12-14 09:57:58,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 04:57:58] 2025-12-14 09:57:58,421 | INFO     | [monitor] control thread has ended
[2025-12-14 04:57:58] 2025-12-14 09:57:58,518 [wrapper] ==== pilot stdout END ====
[2025-12-14 04:57:58] 2025-12-14 09:57:58,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 04:57:58] 2025-12-14 09:57:58,523 [wrapper] pilotpid: 29107
[2025-12-14 04:57:58] 2025-12-14 09:57:58,526 [wrapper] Pilot exit status: 0
[2025-12-14 04:57:58] 2025-12-14 09:57:58,533 [wrapper] pandaids: 6929343784
[2025-12-14 04:57:58] 2025-12-14 09:57:58,559 [wrapper] cleanup supervisor_pilot 22782 29108
[2025-12-14 04:57:58] 2025-12-14 09:57:58,561 [wrapper] Test setup, not cleaning
[2025-12-14 04:57:58] 2025-12-14 09:57:58,563 [wrapper] apfmon messages muted
[2025-12-14 04:57:58] 2025-12-14 09:57:58,565 [wrapper] ==== wrapper stdout END ====
[2025-12-14 04:57:58] 2025-12-14 09:57:58,567 [wrapper] ==== wrapper stderr END ====
[2025-12-14 04:57:58]  *** Error codes and diagnostics ***
[2025-12-14 04:57:58]     "exeErrorCode": 0,
[2025-12-14 04:57:58]     "exeErrorDiag": "",
[2025-12-14 04:57:58]     "pilotErrorCode": 0,
[2025-12-14 04:57:58]     "pilotErrorDiag": "",
[2025-12-14 04:57:58]  *** Listing of results directory ***
[2025-12-14 04:57:58] total 343336
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:19 queuedata.json
[2025-12-14 04:57:58] -rwx------ 1 boincer umatlas     36322 Dec 13 12:20 runpilot2-wrapper.sh
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas       100 Dec 14 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 04:57:58] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 01:44 run_atlas
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas       105 Dec 14 01:44 job.xml
[2025-12-14 04:57:58] -rw-r--r-- 2 boincer umatlas 194306624 Dec 14 01:44 EVNT.47886829._000236.pool.root.1
[2025-12-14 04:57:58] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 01:44 start_atlas.sh
[2025-12-14 04:57:58] drwxrwx--x 2 boincer umatlas      4096 Dec 14 01:44 shared
[2025-12-14 04:57:58] -rw-r--r-- 2 boincer umatlas    592413 Dec 14 01:44 input.tar.gz
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas         0 Dec 14 01:44 boinc_lockfile
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas      2537 Dec 14 01:44 pandaJob.out
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas        57 Dec 14 01:44 setup.sh.local
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas    991736 Dec 14 01:44 agis_schedconf.cvmfs.json
[2025-12-14 04:57:58] drwx------ 5 boincer umatlas      4096 Dec 14 01:44 pilot3
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 04:56 init_data.xml
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas 149248895 Dec 14 04:56 HITS.47886831._005908.pool.root.1
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas       530 Dec 14 04:57 boinc_task_state.xml
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas      1054 Dec 14 04:57 memory_monitor_summary.json
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas   1516240 Dec 14 04:57 agis_ddmendpoints.agis.ALL.json
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas    430038 Dec 14 04:57 log.47886831._005908.job.log.tgz.1
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas        95 Dec 14 04:57 pilot_heartbeat.json
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas      7854 Dec 14 04:57 heartbeat.json
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 04:57 boinc_mmap_file
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas        28 Dec 14 04:57 wrapper_checkpoint.txt
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas       820 Dec 14 04:57 pilotlog.txt
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas   1624446 Dec 14 04:57 log.47886831._005908.job.log.1
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas       357 Dec 14 04:57 output.list
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas       620 Dec 14 04:57 runtime_log
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas   2068480 Dec 14 04:57 result.tar.gz
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 04:57 runtime_log.err
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas       662 Dec 14 04:57 KKiLDmDTio8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8zTKDm68ipTm.diag
[2025-12-14 04:57:58] -rw-r--r-- 1 boincer umatlas     21058 Dec 14 04:57 stderr.txt
[2025-12-14 04:57:58] HITS file was successfully produced:
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas 149248895 Dec 14 04:56 shared/HITS.pool.root.1
[2025-12-14 04:57:58]  *** Contents of shared directory: ***
[2025-12-14 04:57:58] total 338132
[2025-12-14 04:57:58] -rw-r--r-- 2 boincer umatlas 194306624 Dec 14 01:44 ATLAS.root_0
[2025-12-14 04:57:58] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 01:44 start_atlas.sh
[2025-12-14 04:57:58] -rw-r--r-- 2 boincer umatlas    592413 Dec 14 01:44 input.tar.gz
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas 149248895 Dec 14 04:56 HITS.pool.root.1
[2025-12-14 04:57:58] -rw------- 1 boincer umatlas   2068480 Dec 14 04:57 result.tar.gz
04:57:59 (25392): run_atlas exited; CPU time 87384.401140
04:57:59 (25392): called boinc_finish(0)

</stderr_txt>
]]>

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