Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:48:34 (29092): wrapper (7.7.26015): starting
01:48:34 (29092): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 01:48:34] Arguments: --nthreads 8
[2025-12-14 01:48:34] Threads: 8
[2025-12-14 01:48:34] Checking for CVMFS
[2025-12-14 01:48:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 01:48:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 01:48:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 01:48:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 01:48:34] 2.11.2.0 11495 143281 137724 153986 4 188 15791649 18432000 1815 130560 0 100019069 99.977 5820186 26423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 01:48:34] CVMFS is ok
[2025-12-14 01:48:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 01:48:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 01:48:34] Further information can be found at the LHC@home message board.
[2025-12-14 01:48:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 01:48:34] Checking for apptainer binary...
[2025-12-14 01:48:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 01:48:34] Running /usr/bin/apptainer --version
[2025-12-14 01:48:34] apptainer version 1.3.2-1.el7
[2025-12-14 01:48:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 01:48:35] c-206-31.aglt2.org
[2025-12-14 01:48:35] apptainer works
[2025-12-14 01:48:35] Set ATHENA_PROC_NUMBER=8
[2025-12-14 01:48:35] Set ATHENA_CORE_NUMBER=8
[2025-12-14 01:48:35] Starting ATLAS job with PandaID=6929503267
[2025-12-14 01:48:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 04:44:10]  *** The last 200 lines of the pilot log: ***
[2025-12-14 04:44:10] 2025-12-14 09:43:37,926 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2489.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,928 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929503267/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,929 | INFO     | extracted standard info from prmon json
[2025-12-14 04:44:10] 2025-12-14 09:43:37,929 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 04:44:10] 2025-12-14 09:43:37,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 04:44:10] 2025-12-14 09:43:37,929 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 04:44:10] 2025-12-14 09:43:37,929 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 04:44:10] 2025-12-14 09:43:37,932 | INFO     | fitting pss+swap vs Time
[2025-12-14 04:44:10] 2025-12-14 09:43:37,932 | INFO     | sum of square deviations: 1577789583.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,933 | INFO     | sum of deviations: 17041641644.499998
[2025-12-14 04:44:10] 2025-12-14 09:43:37,933 | INFO     | mean x: 1765700164.5
[2025-12-14 04:44:10] 2025-12-14 09:43:37,933 | INFO     | mean y: 2444707.4709302327
[2025-12-14 04:44:10] 2025-12-14 09:43:37,933 | INFO     | intersect: -19068811548.27765
[2025-12-14 04:44:10] 2025-12-14 09:43:37,934 | INFO     | chi2: 2.141139510383817
[2025-12-14 04:44:10] 2025-12-14 09:43:37,934 | INFO     | sum of square deviations: 1444149868.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,935 | INFO     | sum of deviations: 28058501656.999996
[2025-12-14 04:44:10] 2025-12-14 09:43:37,935 | INFO     | mean x: 1765700012.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,935 | INFO     | mean y: 2456959.724550898
[2025-12-14 04:44:10] 2025-12-14 09:43:37,935 | INFO     | intersect: -34303467799.371788
[2025-12-14 04:44:10] 2025-12-14 09:43:37,935 | INFO     | chi2: 1.2854265353128504
[2025-12-14 04:44:10] 2025-12-14 09:43:37,936 | INFO     | current chi2=1.2854265353128504 (change=39.96530683409662 %)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,936 | INFO     | sum of square deviations: 1318277740.5
[2025-12-14 04:44:10] 2025-12-14 09:43:37,936 | INFO     | sum of deviations: 26985260916.500004
[2025-12-14 04:44:10] 2025-12-14 09:43:37,937 | INFO     | mean x: 1765699859.5
[2025-12-14 04:44:10] 2025-12-14 09:43:37,937 | INFO     | mean y: 2455659.1049382715
[2025-12-14 04:44:10] 2025-12-14 09:43:37,937 | INFO     | intersect: -36141575257.14408
[2025-12-14 04:44:10] 2025-12-14 09:43:37,937 | INFO     | chi2: 1.2860342049122397
[2025-12-14 04:44:10] 2025-12-14 09:43:37,937 | INFO     | current chi2=1.2860342049122397 (change=-0.04727377121100096 %)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,937 | INFO     | right removable region: 161
[2025-12-14 04:44:10] 2025-12-14 09:43:37,938 | INFO     | sum of square deviations: 1444149868.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,938 | INFO     | sum of deviations: -6737549247.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,938 | INFO     | mean x: 1765700317.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,939 | INFO     | mean y: 2471500.4251497006
[2025-12-14 04:44:10] 2025-12-14 09:43:37,939 | INFO     | intersect: 8240184984.903349
[2025-12-14 04:44:10] 2025-12-14 09:43:37,939 | INFO     | chi2: 0.9061193232434487
[2025-12-14 04:44:10] 2025-12-14 09:43:37,939 | INFO     | current chi2=0.9061193232434487 (change=57.680509894424425 %)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,939 | INFO     | sum of square deviations: 1318277740.5
[2025-12-14 04:44:10] 2025-12-14 09:43:37,940 | INFO     | sum of deviations: -8936102402.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,940 | INFO     | mean x: 1765700469.5
[2025-12-14 04:44:10] 2025-12-14 09:43:37,940 | INFO     | mean y: 2474097.7283950616
[2025-12-14 04:44:10] 2025-12-14 09:43:37,940 | INFO     | intersect: 11971484665.051617
[2025-12-14 04:44:10] 2025-12-14 09:43:37,941 | INFO     | chi2: 0.884063055690177
[2025-12-14 04:44:10] 2025-12-14 09:43:37,941 | INFO     | current chi2=0.884063055690177 (change=2.4341460321496564 %)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,941 | INFO     | left removable region: 20
[2025-12-14 04:44:10] 2025-12-14 09:43:37,941 | INFO     | sum of square deviations: 869188390.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,942 | INFO     | sum of deviations: 3023069232.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,942 | INFO     | mean x: 1765700439.0
[2025-12-14 04:44:10] 2025-12-14 09:43:37,942 | INFO     | mean y: 2485935.631205674
[2025-12-14 04:44:10] 2025-12-14 09:43:37,942 | INFO     | intersect: -6138685220.681401
[2025-12-14 04:44:10] 2025-12-14 09:43:37,942 | INFO     | chi2: 0.00019441822666288155
[2025-12-14 04:44:10] 2025-12-14 09:43:37,942 | INFO     | current memory leak: 3.48 B/s (using 141 data points, chi2=0.00)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | could have reported an average CPU frequency of 2345 MHz (9 samples)
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | ..............................
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | . Timing measurements:
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | . get job = 0 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | . initial setup = 2 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | . payload setup = 4 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | . stage-in = 0 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,943 | INFO     | . payload execution = 10457 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,944 | INFO     | . stage-out = 0 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,944 | INFO     | . log creation = 0 s
[2025-12-14 04:44:10] 2025-12-14 09:43:37,944 | INFO     | ..............................
[2025-12-14 04:44:10] 2025-12-14 09:43:38,437 | INFO     | 
[2025-12-14 04:44:10] 2025-12-14 09:43:38,438 | INFO     | job summary report
[2025-12-14 04:44:10] 2025-12-14 09:43:38,438 | INFO     | --------------------------------------------------
[2025-12-14 04:44:10] 2025-12-14 09:43:38,438 | INFO     | PanDA job id: 6929503267
[2025-12-14 04:44:10] 2025-12-14 09:43:38,438 | INFO     | task id: 47898878
[2025-12-14 04:44:10] 2025-12-14 09:43:38,438 | INFO     | errors: (none)
[2025-12-14 04:44:10] 2025-12-14 09:43:38,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 04:44:10] 2025-12-14 09:43:38,439 | INFO     | pilot state: finished 
[2025-12-14 04:44:10] 2025-12-14 09:43:38,439 | INFO     | transexitcode: 0
[2025-12-14 04:44:10] 2025-12-14 09:43:38,439 | INFO     | exeerrorcode: 0
[2025-12-14 04:44:10] 2025-12-14 09:43:38,439 | INFO     | exeerrordiag: 
[2025-12-14 04:44:10] 2025-12-14 09:43:38,439 | INFO     | exitcode: 0
[2025-12-14 04:44:10] 2025-12-14 09:43:38,440 | INFO     | exitmsg: OK
[2025-12-14 04:44:10] 2025-12-14 09:43:38,440 | INFO     | cpuconsumptiontime: 79223 s
[2025-12-14 04:44:10] 2025-12-14 09:43:38,440 | INFO     | nevents: 400
[2025-12-14 04:44:10] 2025-12-14 09:43:38,440 | INFO     | neventsw: 0
[2025-12-14 04:44:10] 2025-12-14 09:43:38,440 | INFO     | pid: 7041
[2025-12-14 04:44:10] 2025-12-14 09:43:38,440 | INFO     | pgrp: 7041
[2025-12-14 04:44:10] 2025-12-14 09:43:38,441 | INFO     | corecount: 8
[2025-12-14 04:44:10] 2025-12-14 09:43:38,441 | INFO     | event service: False
[2025-12-14 04:44:10] 2025-12-14 09:43:38,441 | INFO     | sizes: {0: 2283767, 1: 2283966, 4: 2284228, 11: 2284256, 10465: 2313032, 10466: 2322030, 10470: 2322214, 10477: 2322472}
[2025-12-14 04:44:10] 2025-12-14 09:43:38,441 | INFO     | --------------------------------------------------
[2025-12-14 04:44:10] 2025-12-14 09:43:38,441 | INFO     | 
[2025-12-14 04:44:10] 2025-12-14 09:43:38,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-14 04:44:10] 2025-12-14 09:43:38,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 04:44:10] 2025-12-14 09:43:38,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 04:44:10] 2025-12-14 09:43:38,464 | INFO     | job 6929503267 has completed (purged errors)
[2025-12-14 04:44:10] 2025-12-14 09:43:38,464 | INFO     | overall cleanup function is called
[2025-12-14 04:44:10] 2025-12-14 09:43:39,472 | INFO     | --- collectZombieJob: --- 10, [7041]
[2025-12-14 04:44:10] 2025-12-14 09:43:39,472 | INFO     | zombie collector waiting for pid 7041
[2025-12-14 04:44:10] 2025-12-14 09:43:39,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 04:44:10] 2025-12-14 09:43:39,472 | INFO     | collected zombie processes
[2025-12-14 04:44:10] 2025-12-14 09:43:39,472 | INFO     | will attempt to kill all subprocesses of pid=7041
[2025-12-14 04:44:10] 2025-12-14 09:43:39,608 | INFO     | process IDs to be killed: [7041] (in reverse order)
[2025-12-14 04:44:10] 2025-12-14 09:43:39,648 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 04:44:10] 2025-12-14 09:43:39,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 04:44:10] 2025-12-14 09:43:39,652 | INFO     | did not find any defunct processes belonging to 7041
[2025-12-14 04:44:10] 2025-12-14 09:43:39,654 | INFO     | did not find any defunct processes belonging to 7041
[2025-12-14 04:44:10] 2025-12-14 09:43:39,654 | INFO     | ready for new job
[2025-12-14 04:44:10] 2025-12-14 09:43:39,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 04:44:10] 2025-12-14 09:43:39,656 | INFO     | ***************************************
[2025-12-14 04:44:10] 2025-12-14 09:43:39,656 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 04:44:10] 2025-12-14 09:43:39,656 | INFO     | ***************************************
[2025-12-14 04:44:10] 2025-12-14 09:43:39,656 | INFO     | 
[2025-12-14 04:44:10] 2025-12-14 09:43:39,657 | INFO     | architecture information:
[2025-12-14 04:44:10] 2025-12-14 09:43:39,657 | INFO     | executing command: cat /etc/os-release
[2025-12-14 04:44:10] 2025-12-14 09:43:39,666 | INFO     | cat /etc/os-release:
[2025-12-14 04:44:10] NAME="CentOS Linux"
[2025-12-14 04:44:10] VERSION="7 (Core)"
[2025-12-14 04:44:10] ID="centos"
[2025-12-14 04:44:10] ID_LIKE="rhel fedora"
[2025-12-14 04:44:10] VERSION_ID="7"
[2025-12-14 04:44:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 04:44:10] ANSI_COLOR="0;31"
[2025-12-14 04:44:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 04:44:10] HOME_URL="https://www.centos.org/"
[2025-12-14 04:44:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 04:44:10] 
[2025-12-14 04:44:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 04:44:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 04:44:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 04:44:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 04:44:10] 
[2025-12-14 04:44:10] 2025-12-14 09:43:39,666 | INFO     | ***************************************
[2025-12-14 04:44:10] 2025-12-14 09:43:40,170 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-14 04:44:10] 2025-12-14 09:43:40,185 | INFO     | sufficient remaining disk space (28285337600 B)
[2025-12-14 04:44:10] 2025-12-14 09:43:40,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 04:44:10] 2025-12-14 09:43:40,186 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 04:44:10] 2025-12-14 09:43:40,186 | INFO     | update_server=False
[2025-12-14 04:44:10] 2025-12-14 09:43:40,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 04:44:10] 2025-12-14 09:43:40,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 04:44:10] 2025-12-14 09:43:40,360 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 04:44:10] 2025-12-14 09:43:40,360 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 04:44:10] 2025-12-14 09:43:40,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 04:44:10] 2025-12-14 09:43:40,361 | INFO     | will abort loop
[2025-12-14 04:44:10] 2025-12-14 09:43:40,573 | INFO     | all data control threads have been joined
[2025-12-14 04:44:10] 2025-12-14 09:43:40,785 | INFO     | all payload control threads have been joined
[2025-12-14 04:44:10] 2025-12-14 09:43:41,187 | INFO     | [job] retrieve thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,366 | INFO     | [job] job monitor thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 04:44:10] 2025-12-14 09:43:41,399 | INFO     | all job control threads have been joined
[2025-12-14 04:44:10] 2025-12-14 09:43:41,416 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,430 | INFO     | [job] validate thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,434 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,578 | INFO     | [data] control thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,758 | INFO     | [payload] validate_post thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,791 | INFO     | [payload] control thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:41,949 | INFO     | [data] copytool_in thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:42,131 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:42,326 | INFO     | [data] copytool_out thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:42,404 | INFO     | [job] control thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:42,761 | INFO     | [payload] failed_post thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:43,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 04:44:10] 2025-12-14 09:43:44,076 | INFO     | [job] queue monitor thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:45,380 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:43:50,227 | INFO     | job.realtimelogging is not enabled
[2025-12-14 04:44:10] 2025-12-14 09:43:51,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 04:44:10] 2025-12-14 09:44:02,996 | INFO     | [monitor] cgroup control has ended
[2025-12-14 04:44:10] 2025-12-14 09:44:03,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624731498304)>', '<ExcThread(monitor, started 140624426669824)>']
[2025-12-14 04:44:10] 2025-12-14 09:44:09,008 | INFO     | all workflow threads have been joined
[2025-12-14 04:44:10] 2025-12-14 09:44:09,015 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 04:44:10] 2025-12-14 09:44:09,015 | INFO     | traces error code: 0
[2025-12-14 04:44:10] 2025-12-14 09:44:09,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 04:44:10] 2025-12-14 09:44:10,038 | INFO     | PID=410 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-14 04:44:10] 2025-12-14 09:44:10,038 | INFO     | .. there are 3 such processes running
[2025-12-14 04:44:10] 2025-12-14 09:44:10,038 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 04:44:10] 2025-12-14 09:44:10,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 04:44:10] 2025-12-14 09:44:10,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 04:44:10] 2025-12-14 09:44:10,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 04:44:10] 2025-12-14 09:44:10,039 | INFO     | [monitor] control thread has ended
[2025-12-14 04:44:10] 2025-12-14 09:44:10,135 [wrapper] ==== pilot stdout END ====
[2025-12-14 04:44:10] 2025-12-14 09:44:10,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 04:44:10] 2025-12-14 09:44:10,140 [wrapper] pilotpid: 410
[2025-12-14 04:44:10] 2025-12-14 09:44:10,142 [wrapper] Pilot exit status: 0
[2025-12-14 04:44:10] 2025-12-14 09:44:10,151 [wrapper] pandaids: 6929503267
[2025-12-14 04:44:10] 2025-12-14 09:44:10,177 [wrapper] cleanup supervisor_pilot 18390 411
[2025-12-14 04:44:10] 2025-12-14 09:44:10,180 [wrapper] Test setup, not cleaning
[2025-12-14 04:44:10] 2025-12-14 09:44:10,182 [wrapper] apfmon messages muted
[2025-12-14 04:44:10] 2025-12-14 09:44:10,183 [wrapper] ==== wrapper stdout END ====
[2025-12-14 04:44:10] 2025-12-14 09:44:10,185 [wrapper] ==== wrapper stderr END ====
[2025-12-14 04:44:10]  *** Error codes and diagnostics ***
[2025-12-14 04:44:10]     "exeErrorCode": 0,
[2025-12-14 04:44:10]     "exeErrorDiag": "",
[2025-12-14 04:44:10]     "pilotErrorCode": 0,
[2025-12-14 04:44:10]     "pilotErrorDiag": "",
[2025-12-14 04:44:10]  *** Listing of results directory ***
[2025-12-14 04:44:10] total 373132
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:19 queuedata.json
[2025-12-14 04:44:10] -rwx------ 1 boincer umatlas     36322 Dec 13 12:20 runpilot2-wrapper.sh
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas       100 Dec 14 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 04:44:10] -rwxr-xr-x 1 boincer umatlas      7986 Dec 14 01:48 run_atlas
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas       105 Dec 14 01:48 job.xml
[2025-12-14 04:44:10] -rw-r--r-- 2 boincer umatlas 197337843 Dec 14 01:48 EVNT.47898875._000025.pool.root.1
[2025-12-14 04:44:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 01:48 start_atlas.sh
[2025-12-14 04:44:10] drwxrwx--x 2 boincer umatlas      4096 Dec 14 01:48 shared
[2025-12-14 04:44:10] -rw-r--r-- 2 boincer umatlas    592392 Dec 14 01:48 input.tar.gz
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas         0 Dec 14 01:48 boinc_lockfile
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas      2497 Dec 14 01:48 pandaJob.out
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas        57 Dec 14 01:48 setup.sh.local
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas    991736 Dec 14 01:48 agis_schedconf.cvmfs.json
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas   1516240 Dec 14 01:48 agis_ddmendpoints.agis.ALL.json
[2025-12-14 04:44:10] drwx------ 5 boincer umatlas      4096 Dec 14 01:48 pilot3
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 04:39 init_data.xml
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas 177043290 Dec 14 04:42 HITS.47898878._000620.pool.root.1
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas       531 Dec 14 04:42 boinc_task_state.xml
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas      1046 Dec 14 04:43 memory_monitor_summary.json
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas    420984 Dec 14 04:43 log.47898878._000620.job.log.tgz.1
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas        95 Dec 14 04:43 pilot_heartbeat.json
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas      7835 Dec 14 04:43 heartbeat.json
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 04:44 boinc_mmap_file
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas        28 Dec 14 04:44 wrapper_checkpoint.txt
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas       818 Dec 14 04:44 pilotlog.txt
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas   1473704 Dec 14 04:44 log.47898878._000620.job.log.1
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas       357 Dec 14 04:44 output.list
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas       620 Dec 14 04:44 runtime_log
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas   1914880 Dec 14 04:44 result.tar.gz
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas       661 Dec 14 04:44 tKRNDm0Sio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKqPKDmzzHd5n.diag
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 04:44 runtime_log.err
[2025-12-14 04:44:10] -rw-r--r-- 1 boincer umatlas     21040 Dec 14 04:44 stderr.txt
[2025-12-14 04:44:10] HITS file was successfully produced:
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas 177043290 Dec 14 04:42 shared/HITS.pool.root.1
[2025-12-14 04:44:10]  *** Contents of shared directory: ***
[2025-12-14 04:44:10] total 368084
[2025-12-14 04:44:10] -rw-r--r-- 2 boincer umatlas 197337843 Dec 14 01:48 ATLAS.root_0
[2025-12-14 04:44:10] -rw-r--r-- 2 boincer umatlas     15847 Dec 14 01:48 start_atlas.sh
[2025-12-14 04:44:10] -rw-r--r-- 2 boincer umatlas    592392 Dec 14 01:48 input.tar.gz
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas 177043290 Dec 14 04:42 HITS.pool.root.1
[2025-12-14 04:44:10] -rw------- 1 boincer umatlas   1914880 Dec 14 04:44 result.tar.gz
04:44:11 (29092): run_atlas exited; CPU time 79371.785608
04:44:11 (29092): called boinc_finish(0)

</stderr_txt>
]]>

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