Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:07 (446881): wrapper (7.7.26015): starting
00:19:07 (446881): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 00:19:07] Arguments: --nthreads 8
[2025-12-14 00:19:07] Threads: 8
[2025-12-14 00:19:07] Checking for CVMFS
[2025-12-14 00:19:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:19:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:19:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:19:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:19:09] 2.13.3.0 9435 55406 303340 153985 2 18 28325495 32935936 26197 16776704 0 276621654 99.719 195826419 32439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:19:09] CVMFS is ok
[2025-12-14 00:19:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:19:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:19:09] Further information can be found at the LHC@home message board.
[2025-12-14 00:19:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:19:09] Checking for apptainer binary...
[2025-12-14 00:19:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:19:09] Running /usr/bin/apptainer --version
[2025-12-14 00:19:09] apptainer version 1.4.5-2.el9
[2025-12-14 00:19:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:19:10] c-8-17.aglt2.org
[2025-12-14 00:19:10] apptainer works
[2025-12-14 00:19:10] Set ATHENA_PROC_NUMBER=8
[2025-12-14 00:19:10] Set ATHENA_CORE_NUMBER=8
[2025-12-14 00:19:10] Starting ATLAS job with PandaID=6929311401
[2025-12-14 00:19:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 12:59:03]  *** The last 200 lines of the pilot log: ***
[2025-12-14 12:59:03] 2025-12-14 12:12:31,617 | INFO     | fitting pss+swap vs Time
[2025-12-14 12:59:03] 2025-12-14 12:12:31,618 | INFO     | sum of square deviations: 20149020627.594444
[2025-12-14 12:59:03] 2025-12-14 12:12:31,623 | INFO     | sum of deviations: 183696831627.81348
[2025-12-14 12:59:03] 2025-12-14 12:12:31,625 | INFO     | mean x: 1765702058.7587066
[2025-12-14 12:59:03] 2025-12-14 12:12:31,625 | INFO     | mean y: 2462939.4104477614
[2025-12-14 12:59:03] 2025-12-14 12:12:31,625 | INFO     | intersect: -16095285918.341642
[2025-12-14 12:59:03] 2025-12-14 12:12:31,626 | INFO     | chi2: 4.59065370449152
[2025-12-14 12:59:03] 2025-12-14 12:12:31,627 | INFO     | sum of square deviations: 19407169738.891735
[2025-12-14 12:59:03] 2025-12-14 12:12:31,631 | INFO     | sum of deviations: 181246015071.29218
[2025-12-14 12:59:03] 2025-12-14 12:12:31,631 | INFO     | mean x: 1765701906.3098238
[2025-12-14 12:59:03] 2025-12-14 12:12:31,632 | INFO     | mean y: 2462435.7455919394
[2025-12-14 12:59:03] 2025-12-14 12:12:31,632 | INFO     | intersect: -16487651198.964909
[2025-12-14 12:59:03] 2025-12-14 12:12:31,633 | INFO     | chi2: 4.592403640880815
[2025-12-14 12:59:03] 2025-12-14 12:12:31,633 | INFO     | current chi2=4.592403640880815 (change=-0.03811954684325388 %)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,633 | INFO     | right removable region: 396
[2025-12-14 12:59:03] 2025-12-14 12:12:31,634 | INFO     | sum of square deviations: 19406075856.372826
[2025-12-14 12:59:03] 2025-12-14 12:12:31,638 | INFO     | sum of deviations: 58938206265.22164
[2025-12-14 12:59:03] 2025-12-14 12:12:31,638 | INFO     | mean x: 1765702211.3198993
[2025-12-14 12:59:03] 2025-12-14 12:12:31,638 | INFO     | mean y: 2488533.541561713
[2025-12-14 12:59:03] 2025-12-14 12:12:31,639 | INFO     | intersect: -5360126860.933214
[2025-12-14 12:59:03] 2025-12-14 12:12:31,639 | INFO     | chi2: 0.9417877649098575
[2025-12-14 12:59:03] 2025-12-14 12:12:31,639 | INFO     | current chi2=0.9417877649098575 (change=79.48466981971637 %)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,640 | INFO     | sum of square deviations: 18681693561.62258
[2025-12-14 12:59:03] 2025-12-14 12:12:31,644 | INFO     | sum of deviations: 5666046815.443874
[2025-12-14 12:59:03] 2025-12-14 12:12:31,644 | INFO     | mean x: 1765702363.872449
[2025-12-14 12:59:03] 2025-12-14 12:12:31,644 | INFO     | mean y: 2499722.0688775512
[2025-12-14 12:59:03] 2025-12-14 12:12:31,645 | INFO     | intersect: -533027328.66882193
[2025-12-14 12:59:03] 2025-12-14 12:12:31,645 | INFO     | chi2: 0.19758551876561561
[2025-12-14 12:59:03] 2025-12-14 12:12:31,645 | INFO     | current chi2=0.19758551876561561 (change=79.02016503850766 %)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,646 | INFO     | sum of square deviations: 17975424689.322998
[2025-12-14 12:59:03] 2025-12-14 12:12:31,650 | INFO     | sum of deviations: -12673326232.31524
[2025-12-14 12:59:03] 2025-12-14 12:12:31,650 | INFO     | mean x: 1765702516.4392765
[2025-12-14 12:59:03] 2025-12-14 12:12:31,650 | INFO     | mean y: 2503672.73126615
[2025-12-14 12:59:03] 2025-12-14 12:12:31,650 | INFO     | intersect: 1247387974.8722079
[2025-12-14 12:59:03] 2025-12-14 12:12:31,651 | INFO     | chi2: 0.10728001418074488
[2025-12-14 12:59:03] 2025-12-14 12:12:31,651 | INFO     | current chi2=0.10728001418074488 (change=45.704515770710394 %)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,651 | INFO     | sum of square deviations: 17287227118.0
[2025-12-14 12:59:03] 2025-12-14 12:12:31,655 | INFO     | sum of deviations: -21761095930.999977
[2025-12-14 12:59:03] 2025-12-14 12:12:31,655 | INFO     | mean x: 1765702669.0
[2025-12-14 12:59:03] 2025-12-14 12:12:31,655 | INFO     | mean y: 2505688.044502618
[2025-12-14 12:59:03] 2025-12-14 12:12:31,656 | INFO     | intersect: 2225165511.0142503
[2025-12-14 12:59:03] 2025-12-14 12:12:31,656 | INFO     | chi2: 0.08478743212895175
[2025-12-14 12:59:03] 2025-12-14 12:12:31,656 | INFO     | current chi2=0.08478743212895175 (change=20.966237023326393 %)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,656 | INFO     | left removable region: 40
[2025-12-14 12:59:03] 2025-12-14 12:12:31,657 | INFO     | sum of square deviations: 13992314731.76397
[2025-12-14 12:59:03] 2025-12-14 12:12:31,660 | INFO     | sum of deviations: -2594931479.9101195
[2025-12-14 12:59:03] 2025-12-14 12:12:31,660 | INFO     | mean x: 1765703096.1853933
[2025-12-14 12:59:03] 2025-12-14 12:12:31,661 | INFO     | mean y: 2500974.786516854
[2025-12-14 12:59:03] 2025-12-14 12:12:31,661 | INFO     | intersect: 329957770.6278022
[2025-12-14 12:59:03] 2025-12-14 12:12:31,661 | INFO     | chi2: 0.041615538996897086
[2025-12-14 12:59:03] 2025-12-14 12:12:31,661 | INFO     | current memory leak: -0.19 B/s (using 356 data points, chi2=0.04)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,662 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,662 | INFO     | ..............................
[2025-12-14 12:59:03] 2025-12-14 12:12:31,662 | INFO     | . Timing measurements:
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . get job = 0 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . initial setup = 8 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . payload setup = 51 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . stage-in = 0 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . payload execution = 24566 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . stage-out = 3 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | . log creation = 0 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,663 | INFO     | ..............................
[2025-12-14 12:59:03] 2025-12-14 12:12:31,797 | INFO     | 
[2025-12-14 12:59:03] 2025-12-14 12:12:31,797 | INFO     | job summary report
[2025-12-14 12:59:03] 2025-12-14 12:12:31,797 | INFO     | --------------------------------------------------
[2025-12-14 12:59:03] 2025-12-14 12:12:31,797 | INFO     | PanDA job id: 6929311401
[2025-12-14 12:59:03] 2025-12-14 12:12:31,797 | INFO     | task id: 47886831
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | errors: (none)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | pilot state: finished 
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | transexitcode: 0
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | exeerrorcode: 0
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | exeerrordiag: 
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | exitcode: 0
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | exitmsg: OK
[2025-12-14 12:59:03] 2025-12-14 12:12:31,798 | INFO     | cpuconsumptiontime: 53273 s
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | nevents: 400
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | neventsw: 0
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | pid: 498547
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | pgrp: 498547
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | corecount: 8
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | event service: False
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | sizes: {0: 2283817, 1: 2283845, 2: 2284044, 13: 2284044, 24: 2284100, 35: 2284128, 39: 2284546, 46: 2284574, 24621: 2319384, 24625: 2328410, 24626: 2328466, 24638:
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | --------------------------------------------------
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | 
[2025-12-14 12:59:03] 2025-12-14 12:12:31,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-14 12:59:03] 2025-12-14 12:12:31,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,828 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,828 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,828 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 12:59:03] 2025-12-14 12:12:31,831 | INFO     | job 6929311401 has completed (purged errors)
[2025-12-14 12:59:03] 2025-12-14 12:12:31,832 | INFO     | overall cleanup function is called
[2025-12-14 12:59:03] 2025-12-14 12:12:32,842 | INFO     | --- collectZombieJob: --- 10, [498547]
[2025-12-14 12:59:03] 2025-12-14 12:12:32,842 | INFO     | zombie collector waiting for pid 498547
[2025-12-14 12:59:03] 2025-12-14 12:12:32,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 12:59:03] 2025-12-14 12:12:32,842 | INFO     | collected zombie processes
[2025-12-14 12:59:03] 2025-12-14 12:12:32,846 | INFO     | will attempt to kill all subprocesses of pid=498547
[2025-12-14 12:59:03] 2025-12-14 12:12:33,468 | INFO     | process IDs to be killed: [498547] (in reverse order)
[2025-12-14 12:59:03] 2025-12-14 12:12:33,662 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 12:59:03] 2025-12-14 12:12:33,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 12:59:03] 2025-12-14 12:12:33,682 | INFO     | did not find any defunct processes belonging to 498547
[2025-12-14 12:59:03] 2025-12-14 12:12:33,697 | INFO     | did not find any defunct processes belonging to 498547
[2025-12-14 12:59:03] 2025-12-14 12:12:33,697 | INFO     | ready for new job
[2025-12-14 12:59:03] 2025-12-14 12:12:33,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 12:59:03] 2025-12-14 12:12:33,700 | INFO     | ***************************************
[2025-12-14 12:59:03] 2025-12-14 12:12:33,702 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 12:59:03] 2025-12-14 12:12:33,702 | INFO     | ***************************************
[2025-12-14 12:59:03] 2025-12-14 12:12:33,702 | INFO     | 
[2025-12-14 12:59:03] 2025-12-14 12:12:33,704 | INFO     | architecture information:
[2025-12-14 12:59:03] 2025-12-14 12:12:33,705 | INFO     | executing command: cat /etc/os-release
[2025-12-14 12:59:03] 2025-12-14 12:12:33,730 | INFO     | cat /etc/os-release:
[2025-12-14 12:59:03] NAME="CentOS Linux"
[2025-12-14 12:59:03] VERSION="7 (Core)"
[2025-12-14 12:59:03] ID="centos"
[2025-12-14 12:59:03] ID_LIKE="rhel fedora"
[2025-12-14 12:59:03] VERSION_ID="7"
[2025-12-14 12:59:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 12:59:03] ANSI_COLOR="0;31"
[2025-12-14 12:59:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 12:59:03] HOME_URL="https://www.centos.org/"
[2025-12-14 12:59:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 12:59:03] 
[2025-12-14 12:59:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 12:59:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 12:59:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 12:59:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 12:59:03] 
[2025-12-14 12:59:03] 2025-12-14 12:12:33,738 | INFO     | ***************************************
[2025-12-14 12:59:03] 2025-12-14 12:12:34,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-14 12:59:03] 2025-12-14 12:12:34,320 | INFO     | sufficient remaining disk space (75114741760 B)
[2025-12-14 12:59:03] 2025-12-14 12:12:34,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 12:59:03] 2025-12-14 12:12:34,326 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 12:59:03] 2025-12-14 12:12:34,326 | INFO     | update_server=False
[2025-12-14 12:59:03] 2025-12-14 12:12:34,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 12:59:03] 2025-12-14 12:12:34,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 12:59:03] 2025-12-14 12:12:34,705 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 12:59:03] 2025-12-14 12:12:34,706 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 12:59:03] 2025-12-14 12:12:34,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 12:59:03] 2025-12-14 12:12:34,706 | INFO     | will abort loop
[2025-12-14 12:59:03] 2025-12-14 12:12:35,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 12:59:03] 2025-12-14 12:12:35,312 | INFO     | all data control threads have been joined
[2025-12-14 12:59:03] 2025-12-14 12:12:35,337 | INFO     | [job] retrieve thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:35,588 | INFO     | all job control threads have been joined
[2025-12-14 12:59:03] 2025-12-14 12:12:35,632 | INFO     | all payload control threads have been joined
[2025-12-14 12:59:03] 2025-12-14 12:12:35,714 | INFO     | [job] job monitor thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,050 | INFO     | [payload] validate_post thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,202 | INFO     | [data] copytool_in thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,230 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,305 | INFO     | [job] validate thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,318 | INFO     | [data] control thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,368 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,594 | INFO     | [job] control thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,614 | INFO     | [data] copytool_out thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,620 | INFO     | [payload] failed_post thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,638 | INFO     | [payload] control thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,708 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:36,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 12:59:03] 2025-12-14 12:12:37,809 | INFO     | [job] queue monitor thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:39,297 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:12:44,811 | INFO     | job.realtimelogging is not enabled
[2025-12-14 12:59:03] 2025-12-14 12:12:45,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 12:59:03] 2025-12-14 12:13:04,520 | INFO     | PID=456437 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 12:59:03] 2025-12-14 12:13:04,520 | INFO     | .. there are 29 such processes running
[2025-12-14 12:59:03] 2025-12-14 12:13:04,521 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 12:59:03] 2025-12-14 12:13:04,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 12:59:03] 2025-12-14 12:13:04,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 12:59:03] 2025-12-14 12:13:12,102 | INFO     | [monitor] cgroup control has ended
[2025-12-14 12:59:03] 2025-12-14 12:13:13,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941407737664)>', '<ExcThread(monitor, started 139940654454528)>']
[2025-12-14 12:59:03] 2025-12-14 12:13:13,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 12:59:03] 2025-12-14 12:13:13,608 | INFO     | [monitor] control thread has ended
[2025-12-14 12:59:03] 2025-12-14 12:13:18,268 | INFO     | all workflow threads have been joined
[2025-12-14 12:59:03] 2025-12-14 12:13:18,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 12:59:03] 2025-12-14 12:13:18,268 | INFO     | traces error code: 0
[2025-12-14 12:59:03] 2025-12-14 12:13:18,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 12:59:03] 2025-12-14 12:13:18,423 [wrapper] ==== pilot stdout END ====
[2025-12-14 12:59:03] 2025-12-14 12:13:18,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 12:59:03] 2025-12-14 12:13:18,452 [wrapper] pilotpid: 456437
[2025-12-14 12:59:03] 2025-12-14 12:13:18,486 [wrapper] Pilot exit status: 0
[2025-12-14 12:59:03] 2025-12-14 12:13:18,549 [wrapper] pandaids: 6929311401
[2025-12-14 12:59:03] 2025-12-14 12:13:18,655 [wrapper] cleanup supervisor_pilot 1828631 456438
[2025-12-14 12:59:03] 2025-12-14 12:13:18,662 [wrapper] Test setup, not cleaning
[2025-12-14 12:59:03] 2025-12-14 12:13:18,680 [wrapper] apfmon messages muted
[2025-12-14 12:59:03] 2025-12-14 12:13:18,683 [wrapper] ==== wrapper stdout END ====
[2025-12-14 12:59:03] 2025-12-14 12:13:18,686 [wrapper] ==== wrapper stderr END ====
[2025-12-14 12:59:03]  *** Error codes and diagnostics ***
[2025-12-14 12:59:03]     "exeErrorCode": 0,
[2025-12-14 12:59:03]     "exeErrorDiag": "",
[2025-12-14 12:59:03]     "pilotErrorCode": 0,
[2025-12-14 12:59:03]     "pilotErrorDiag": "",
[2025-12-14 12:59:03]  *** Listing of results directory ***
[2025-12-14 12:59:03] total 343728
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:45 pilot3.tar.gz
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:45 queuedata.json
[2025-12-14 12:59:03] -rwx------. 1 boincer umatlas     36322 Dec 13 08:45 runpilot2-wrapper.sh
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 12:59:03] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:19 run_atlas
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:19 job.xml
[2025-12-14 12:59:03] -rw-r--r--. 2 boincer umatlas 191936390 Dec 14 00:19 EVNT.47886829._000217.pool.root.1
[2025-12-14 12:59:03] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:19 start_atlas.sh
[2025-12-14 12:59:03] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:19 shared
[2025-12-14 12:59:03] -rw-r--r--. 2 boincer umatlas    592412 Dec 14 00:19 input.tar.gz
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:19 boinc_lockfile
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas      2537 Dec 14 00:19 pandaJob.out
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas        57 Dec 14 00:19 setup.sh.local
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas    991736 Dec 14 00:20 agis_schedconf.cvmfs.json
[2025-12-14 12:59:03] drwx------. 5 boincer umatlas      4096 Dec 14 00:20 pilot3
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas 149330989 Dec 14 07:11 HITS.47886831._005412.pool.root.1
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas       529 Dec 14 07:11 boinc_task_state.xml
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas      1039 Dec 14 07:12 memory_monitor_summary.json
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas   1516240 Dec 14 07:12 agis_ddmendpoints.agis.ALL.json
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas    554134 Dec 14 07:12 log.47886831._005412.job.log.tgz.1
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas      7814 Dec 14 07:12 heartbeat.json
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas        95 Dec 14 07:13 pilot_heartbeat.json
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas      5081 Dec 14 07:13 pilotlog.txt
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas   2839871 Dec 14 07:13 log.47886831._005412.job.log.1
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas       357 Dec 14 07:13 output.list
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas       620 Dec 14 07:13 runtime_log
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas   3409920 Dec 14 07:13 result.tar.gz
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas      9333 Dec 14 07:13 runtime_log.err
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas       656 Dec 14 07:13 9cGLDmk7eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBeTKDmDF2Cwn.diag
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas      6658 Dec 14 12:55 init_data.xml
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 12:59 boinc_mmap_file
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas        26 Dec 14 12:59 wrapper_checkpoint.txt
[2025-12-14 12:59:03] -rw-r--r--. 1 boincer umatlas     21060 Dec 14 12:59 stderr.txt
[2025-12-14 12:59:03] HITS file was successfully produced:
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas 149330989 Dec 14 07:11 shared/HITS.pool.root.1
[2025-12-14 12:59:03]  *** Contents of shared directory: ***
[2025-12-14 12:59:03] total 337208
[2025-12-14 12:59:03] -rw-r--r--. 2 boincer umatlas 191936390 Dec 14 00:19 ATLAS.root_0
[2025-12-14 12:59:03] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:19 start_atlas.sh
[2025-12-14 12:59:03] -rw-r--r--. 2 boincer umatlas    592412 Dec 14 00:19 input.tar.gz
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas 149330989 Dec 14 07:11 HITS.pool.root.1
[2025-12-14 12:59:03] -rw-------. 1 boincer umatlas   3409920 Dec 14 07:13 result.tar.gz
12:59:05 (446881): run_atlas exited; CPU time 54190.305400
12:59:05 (446881): called boinc_finish(0)

</stderr_txt>
]]>

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