Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:00 (246408): wrapper (7.7.26015): starting
00:12:00 (246408): wrapper: running run_atlas (--nthreads 9)
[2025-12-14 00:12:00] Arguments: --nthreads 9
[2025-12-14 00:12:00] Threads: 9
[2025-12-14 00:12:00] Checking for CVMFS
[2025-12-14 00:12:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:12:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:12:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:12:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:12:04] 2.13.3.0 11601 55533 353360 153984 1 655 28375090 32935937 19249 16776704 0 199318478 99.440 288630774 38710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:12:04] CVMFS is ok
[2025-12-14 00:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:12:04] Further information can be found at the LHC@home message board.
[2025-12-14 00:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:12:04] Checking for apptainer binary...
[2025-12-14 00:12:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:12:04] Running /usr/bin/apptainer --version
[2025-12-14 00:12:04] apptainer version 1.4.5-2.el9
[2025-12-14 00:12:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:12:04] c6-6-39-4.aglt2.org
[2025-12-14 00:12:04] apptainer works
[2025-12-14 00:12:04] Set ATHENA_PROC_NUMBER=9
[2025-12-14 00:12:04] Set ATHENA_CORE_NUMBER=9
[2025-12-14 00:12:05] Starting ATLAS job with PandaID=6929368376
[2025-12-14 00:12:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 07:45:16]  *** The last 200 lines of the pilot log: ***
[2025-12-14 07:45:16] 2025-12-14 12:44:09,048 | INFO     | .. there are 20 such processes running
[2025-12-14 07:45:16] 2025-12-14 12:44:09,832 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 07:45:16] 2025-12-14 12:44:09,876 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2936.844732142857
[2025-12-14 07:45:16] 2025-12-14 12:44:09,910 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6929368376/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 07:45:16] 2025-12-14 12:44:09,910 | INFO     | extracted standard info from prmon json
[2025-12-14 07:45:16] 2025-12-14 12:44:09,911 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 07:45:16] 2025-12-14 12:44:09,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 07:45:16] 2025-12-14 12:44:09,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 07:45:16] 2025-12-14 12:44:09,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 07:45:16] 2025-12-14 12:44:09,969 | INFO     | fitting pss+swap vs Time
[2025-12-14 07:45:16] 2025-12-14 12:44:09,970 | INFO     | sum of square deviations: 26412656531.724884
[2025-12-14 07:45:16] 2025-12-14 12:44:10,013 | INFO     | sum of deviations: 66620336745.85006
[2025-12-14 07:45:16] 2025-12-14 12:44:10,013 | INFO     | mean x: 1765702763.475
[2025-12-14 07:45:16] 2025-12-14 12:44:10,013 | INFO     | mean y: 2511903.713636364
[2025-12-14 07:45:16] 2025-12-14 12:44:10,013 | INFO     | intersect: -4451099665.213262
[2025-12-14 07:45:16] 2025-12-14 12:44:10,014 | INFO     | chi2: 6.067233365588508
[2025-12-14 07:45:16] 2025-12-14 12:44:10,014 | INFO     | sum of square deviations: 25522447599.8529
[2025-12-14 07:45:16] 2025-12-14 12:44:10,018 | INFO     | sum of deviations: 152623657968.6552
[2025-12-14 07:45:16] 2025-12-14 12:44:10,018 | INFO     | mean x: 1765702610.981609
[2025-12-14 07:45:16] 2025-12-14 12:44:10,018 | INFO     | mean y: 2526570.206896552
[2025-12-14 07:45:16] 2025-12-14 12:44:10,019 | INFO     | intersect: -10556335009.133629
[2025-12-14 07:45:16] 2025-12-14 12:44:10,019 | INFO     | chi2: 3.867636419396595
[2025-12-14 07:45:16] 2025-12-14 12:44:10,026 | INFO     | current chi2=3.867636419396595 (change=36.25370599171863 %)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,027 | INFO     | sum of square deviations: 24652471361.44195
[2025-12-14 07:45:16] 2025-12-14 12:44:10,067 | INFO     | time since job start (27053s) is within the limit (174528.0s)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,068 | INFO     | sum of deviations: 150681503064.8141
[2025-12-14 07:45:16] 2025-12-14 12:44:10,069 | INFO     | mean x: 1765702458.488372
[2025-12-14 07:45:16] 2025-12-14 12:44:10,069 | INFO     | mean y: 2526229.7627906976
[2025-12-14 07:45:16] 2025-12-14 12:44:10,069 | INFO     | intersect: -10789848153.699562
[2025-12-14 07:45:16] 2025-12-14 12:44:10,069 | INFO     | chi2: 3.868967777240625
[2025-12-14 07:45:16] 2025-12-14 12:44:10,070 | INFO     | current chi2=3.868967777240625 (change=-0.034423035147591374 %)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,070 | INFO     | right removable region: 429
[2025-12-14 07:45:16] 2025-12-14 12:44:10,070 | INFO     | sum of square deviations: 25522292781.852905
[2025-12-14 07:45:16] 2025-12-14 12:44:10,082 | INFO     | sum of deviations: -64581352603.33334
[2025-12-14 07:45:16] 2025-12-14 12:44:10,082 | INFO     | mean x: 1765702915.981609
[2025-12-14 07:45:16] 2025-12-14 12:44:10,083 | INFO     | mean y: 2534346.3333333335
[2025-12-14 07:45:16] 2025-12-14 12:44:10,083 | INFO     | intersect: 4470451221.372941
[2025-12-14 07:45:16] 2025-12-14 12:44:10,095 | INFO     | chi2: 2.8252233921964973
[2025-12-14 07:45:16] 2025-12-14 12:44:10,096 | INFO     | current chi2=2.8252233921964973 (change=53.43473339561488 %)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,096 | INFO     | sum of square deviations: 24652135799.462715
[2025-12-14 07:45:16] 2025-12-14 12:44:10,119 | INFO     | sum of deviations: -106392993898.37909
[2025-12-14 07:45:16] 2025-12-14 12:44:10,120 | INFO     | mean x: 1765703068.4906976
[2025-12-14 07:45:16] 2025-12-14 12:44:10,120 | INFO     | mean y: 2541662.030232558
[2025-12-14 07:45:16] 2025-12-14 12:44:10,120 | INFO     | intersect: 7622913272.849216
[2025-12-14 07:45:16] 2025-12-14 12:44:10,120 | INFO     | chi2: 2.4743323670084045
[2025-12-14 07:45:16] 2025-12-14 12:44:10,121 | INFO     | current chi2=2.4743323670084045 (change=12.419939115515009 %)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,121 | INFO     | left removable region: 20
[2025-12-14 07:45:16] 2025-12-14 12:44:10,121 | INFO     | sum of square deviations: 21213682326.880226
[2025-12-14 07:45:16] 2025-12-14 12:44:10,138 | INFO     | sum of deviations: -43679437222.75544
[2025-12-14 07:45:16] 2025-12-14 12:44:10,138 | INFO     | mean x: 1765703038.0171149
[2025-12-14 07:45:16] 2025-12-14 12:44:10,138 | INFO     | mean y: 2561467.393643032
[2025-12-14 07:45:16] 2025-12-14 12:44:10,138 | INFO     | intersect: 3638182752.5003223
[2025-12-14 07:45:16] 2025-12-14 12:44:10,139 | INFO     | chi2: 0.11160197120341069
[2025-12-14 07:45:16] 2025-12-14 12:44:10,139 | INFO     | current memory leak: -2.06 B/s (using 409 data points, chi2=0.11)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,155 | INFO     | could have reported an average CPU frequency of 2925 MHz (18 samples)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | ..............................
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . Timing measurements:
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . get job = 0 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . initial setup = 7 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . payload setup = 46 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . stage-in = 0 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . payload execution = 26861 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . stage-out = 7 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | . log creation = 2 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,156 | INFO     | ..............................
[2025-12-14 07:45:16] 2025-12-14 12:44:10,590 | INFO     | 
[2025-12-14 07:45:16] 2025-12-14 12:44:10,592 | INFO     | job summary report
[2025-12-14 07:45:16] 2025-12-14 12:44:10,592 | INFO     | --------------------------------------------------
[2025-12-14 07:45:16] 2025-12-14 12:44:10,592 | INFO     | PanDA job id: 6929368376
[2025-12-14 07:45:16] 2025-12-14 12:44:10,592 | INFO     | task id: 47898878
[2025-12-14 07:45:16] 2025-12-14 12:44:10,592 | INFO     | errors: (none)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | pilot state: finished 
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | transexitcode: 0
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | exeerrorcode: 0
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | exeerrordiag: 
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | exitcode: 0
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | exitmsg: OK
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | cpuconsumptiontime: 39356 s
[2025-12-14 07:45:16] 2025-12-14 12:44:10,593 | INFO     | nevents: 400
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | neventsw: 0
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | pid: 287459
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | pgrp: 287459
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | corecount: 9
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | event service: False
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | sizes: {0: 2283108, 1: 2283793, 3: 2283793, 4: 2283821, 5: 2283821, 6: 2284204, 17: 2284204, 28: 2284232, 40: 2284522, 51: 2284550, 26914: 2320970, 26923: 2329968,
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | --------------------------------------------------
[2025-12-14 07:45:16] 2025-12-14 12:44:10,594 | INFO     | 
[2025-12-14 07:45:16] 2025-12-14 12:44:10,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-14 07:45:16] 2025-12-14 12:44:10,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,695 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,695 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 07:45:16] 2025-12-14 12:44:10,738 | INFO     | job 6929368376 has completed (purged errors)
[2025-12-14 07:45:16] 2025-12-14 12:44:10,738 | INFO     | overall cleanup function is called
[2025-12-14 07:45:16] 2025-12-14 12:44:11,750 | INFO     | --- collectZombieJob: --- 10, [287459]
[2025-12-14 07:45:16] 2025-12-14 12:44:11,751 | INFO     | zombie collector waiting for pid 287459
[2025-12-14 07:45:16] 2025-12-14 12:44:11,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 07:45:16] 2025-12-14 12:44:11,751 | INFO     | collected zombie processes
[2025-12-14 07:45:16] 2025-12-14 12:44:11,751 | INFO     | will attempt to kill all subprocesses of pid=287459
[2025-12-14 07:45:16] 2025-12-14 12:44:13,722 | INFO     | process IDs to be killed: [287459] (in reverse order)
[2025-12-14 07:45:16] 2025-12-14 12:44:13,974 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 07:45:16] 2025-12-14 12:44:13,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 07:45:16] 2025-12-14 12:44:13,987 | INFO     | did not find any defunct processes belonging to 287459
[2025-12-14 07:45:16] 2025-12-14 12:44:14,000 | INFO     | did not find any defunct processes belonging to 287459
[2025-12-14 07:45:16] 2025-12-14 12:44:14,000 | INFO     | ready for new job
[2025-12-14 07:45:16] 2025-12-14 12:44:14,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 07:45:16] 2025-12-14 12:44:14,004 | INFO     | ***************************************
[2025-12-14 07:45:16] 2025-12-14 12:44:14,004 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 07:45:16] 2025-12-14 12:44:14,004 | INFO     | ***************************************
[2025-12-14 07:45:16] 2025-12-14 12:44:14,004 | INFO     | 
[2025-12-14 07:45:16] 2025-12-14 12:44:14,037 | INFO     | architecture information:
[2025-12-14 07:45:16] 2025-12-14 12:44:14,057 | INFO     | executing command: cat /etc/os-release
[2025-12-14 07:45:16] 2025-12-14 12:44:14,200 | INFO     | cat /etc/os-release:
[2025-12-14 07:45:16] NAME="CentOS Linux"
[2025-12-14 07:45:16] VERSION="7 (Core)"
[2025-12-14 07:45:16] ID="centos"
[2025-12-14 07:45:16] ID_LIKE="rhel fedora"
[2025-12-14 07:45:16] VERSION_ID="7"
[2025-12-14 07:45:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 07:45:16] ANSI_COLOR="0;31"
[2025-12-14 07:45:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 07:45:16] HOME_URL="https://www.centos.org/"
[2025-12-14 07:45:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 07:45:16] 
[2025-12-14 07:45:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 07:45:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 07:45:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 07:45:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 07:45:16] 
[2025-12-14 07:45:16] 2025-12-14 12:44:14,200 | INFO     | ***************************************
[2025-12-14 07:45:16] 2025-12-14 12:44:14,703 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-14 07:45:16] 2025-12-14 12:44:14,862 | INFO     | sufficient remaining disk space (75156684800 B)
[2025-12-14 07:45:16] 2025-12-14 12:44:14,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 07:45:16] 2025-12-14 12:44:14,862 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 07:45:16] 2025-12-14 12:44:14,862 | INFO     | update_server=False
[2025-12-14 07:45:16] 2025-12-14 12:44:14,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 07:45:16] 2025-12-14 12:44:14,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 07:45:16] 2025-12-14 12:44:14,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:45:16] 2025-12-14 12:44:14,864 | INFO     | aborting loop
[2025-12-14 07:45:16] 2025-12-14 12:44:14,893 | INFO     | all data control threads have been joined
[2025-12-14 07:45:16] 2025-12-14 12:44:15,102 | INFO     | all payload control threads have been joined
[2025-12-14 07:45:16] 2025-12-14 12:44:15,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 07:45:16] 2025-12-14 12:44:15,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:45:16] 2025-12-14 12:44:15,868 | INFO     | [job] retrieve thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:15,869 | INFO     | [job] job monitor thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:15,893 | INFO     | [payload] validate_post thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:15,900 | INFO     | [data] control thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,111 | INFO     | all job control threads have been joined
[2025-12-14 07:45:16] 2025-12-14 12:44:16,112 | INFO     | [payload] control thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,387 | INFO     | [data] copytool_in thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,403 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,430 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,434 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,529 | INFO     | [payload] failed_post thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,627 | INFO     | [job] queue monitor thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:16,875 | INFO     | [data] copytool_out thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:17,137 | INFO     | [job] control thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:17,325 | INFO     | [job] validate thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:17,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:19,443 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 07:45:16] 2025-12-14 12:44:46,956 | INFO     | PID=259706 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 07:45:16] 2025-12-14 12:44:46,957 | INFO     | .. there are 20 such processes running
[2025-12-14 07:45:16] 2025-12-14 12:44:46,957 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 07:45:16] 2025-12-14 12:44:46,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 07:45:16] 2025-12-14 12:44:46,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 07:45:16] 2025-12-14 12:45:07,159 | INFO     | [monitor] cgroup control has ended
[2025-12-14 07:45:16] 2025-12-14 12:45:08,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231774906176)>', '<ExcThread(monitor, started 140231126796032)>']
[2025-12-14 07:45:16] 2025-12-14 12:45:09,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 07:45:16] 2025-12-14 12:45:09,092 | INFO     | [monitor] control thread has ended
[2025-12-14 07:45:16] 2025-12-14 12:45:13,566 | INFO     | all workflow threads have been joined
[2025-12-14 07:45:16] 2025-12-14 12:45:13,566 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 07:45:16] 2025-12-14 12:45:13,567 | INFO     | traces error code: 0
[2025-12-14 07:45:16] 2025-12-14 12:45:13,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 07:45:16] 2025-12-14 12:45:15,007 [wrapper] ==== pilot stdout END ====
[2025-12-14 07:45:16] 2025-12-14 12:45:15,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 07:45:16] 2025-12-14 12:45:15,066 [wrapper] pilotpid: 259706
[2025-12-14 07:45:16] 2025-12-14 12:45:15,087 [wrapper] Pilot exit status: 0
[2025-12-14 07:45:16] 2025-12-14 12:45:15,175 [wrapper] pandaids: 6929368376
[2025-12-14 07:45:16] 2025-12-14 12:45:15,638 [wrapper] cleanup supervisor_pilot 1793993 259707
[2025-12-14 07:45:16] 2025-12-14 12:45:15,655 [wrapper] Test setup, not cleaning
[2025-12-14 07:45:16] 2025-12-14 12:45:15,670 [wrapper] apfmon messages muted
[2025-12-14 07:45:16] 2025-12-14 12:45:15,685 [wrapper] ==== wrapper stdout END ====
[2025-12-14 07:45:16] 2025-12-14 12:45:15,701 [wrapper] ==== wrapper stderr END ====
[2025-12-14 07:45:16]  *** Error codes and diagnostics ***
[2025-12-14 07:45:16]     "exeErrorCode": 0,
[2025-12-14 07:45:16]     "exeErrorDiag": "",
[2025-12-14 07:45:16]     "pilotErrorCode": 0,
[2025-12-14 07:45:16]     "pilotErrorDiag": "",
[2025-12-14 07:45:16]  *** Listing of results directory ***
[2025-12-14 07:45:16] total 372228
[2025-12-14 07:45:16] -rwx------. 1 boincer umatlas     36322 Dec 13 08:47 runpilot2-wrapper.sh
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:50 pilot3.tar.gz
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:50 queuedata.json
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 07:45:16] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:12 run_atlas
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:12 job.xml
[2025-12-14 07:45:16] -rw-r--r--. 2 boincer umatlas 195499828 Dec 14 00:12 EVNT.47898875._000005.pool.root.1
[2025-12-14 07:45:16] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:12 start_atlas.sh
[2025-12-14 07:45:16] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:12 shared
[2025-12-14 07:45:16] -rw-r--r--. 2 boincer umatlas    592385 Dec 14 00:12 input.tar.gz
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:12 boinc_lockfile
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas      2496 Dec 14 00:12 pandaJob.out
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas        57 Dec 14 00:12 setup.sh.local
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas    991728 Dec 14 00:13 agis_schedconf.cvmfs.json
[2025-12-14 07:45:16] drwx------. 5 boincer umatlas      4096 Dec 14 00:13 pilot3
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas      6842 Dec 14 07:39 init_data.xml
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas 174569212 Dec 14 07:40 HITS.47898878._000117.pool.root.1
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas       530 Dec 14 07:40 boinc_task_state.xml
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas      1040 Dec 14 07:43 memory_monitor_summary.json
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas   1516240 Dec 14 07:43 agis_ddmendpoints.agis.ALL.json
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas    604175 Dec 14 07:43 log.47898878._000117.job.log.tgz.1
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas        95 Dec 14 07:44 pilot_heartbeat.json
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas      7812 Dec 14 07:44 heartbeat.json
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 07:45 boinc_mmap_file
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas        27 Dec 14 07:45 wrapper_checkpoint.txt
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas      4823 Dec 14 07:45 pilotlog.txt
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas   2985891 Dec 14 07:45 log.47898878._000117.job.log.1
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas       357 Dec 14 07:45 output.list
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas       620 Dec 14 07:45 runtime_log
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas   3604480 Dec 14 07:45 result.tar.gz
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas      9348 Dec 14 07:45 runtime_log.err
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas       657 Dec 14 07:45 nqfLDmH9eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNcPKDmdZCELm.diag
[2025-12-14 07:45:16] -rw-r--r--. 1 boincer umatlas     21190 Dec 14 07:45 stderr.txt
[2025-12-14 07:45:16] HITS file was successfully produced:
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas 174569212 Dec 14 07:40 shared/HITS.pool.root.1
[2025-12-14 07:45:16]  *** Contents of shared directory: ***
[2025-12-14 07:45:16] total 365520
[2025-12-14 07:45:16] -rw-r--r--. 2 boincer umatlas 195499828 Dec 14 00:12 ATLAS.root_0
[2025-12-14 07:45:16] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:12 start_atlas.sh
[2025-12-14 07:45:16] -rw-r--r--. 2 boincer umatlas    592385 Dec 14 00:12 input.tar.gz
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas 174569212 Dec 14 07:40 HITS.pool.root.1
[2025-12-14 07:45:16] -rw-------. 1 boincer umatlas   3604480 Dec 14 07:45 result.tar.gz
07:45:18 (246408): run_atlas exited; CPU time 40216.852789
07:45:18 (246408): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN