Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:55 (245312): wrapper (7.7.26015): starting
00:11:55 (245312): wrapper: running run_atlas (--nthreads 9)
[2025-12-14 00:11:55] Arguments: --nthreads 9
[2025-12-14 00:11:55] Threads: 9
[2025-12-14 00:11:55] Checking for CVMFS
[2025-12-14 00:11:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:11:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:11:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:11:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:11:58] 2.13.3.0 11601 55533 352784 153984 1 634 28367597 32935936 19190 16776704 0 199317392 99.440 288627725 38711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:11:58] CVMFS is ok
[2025-12-14 00:11:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:11:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:11:58] Further information can be found at the LHC@home message board.
[2025-12-14 00:11:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:11:58] Checking for apptainer binary...
[2025-12-14 00:11:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:11:58] Running /usr/bin/apptainer --version
[2025-12-14 00:11:58] apptainer version 1.4.5-2.el9
[2025-12-14 00:11:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:11:59] c6-6-39-4.aglt2.org
[2025-12-14 00:11:59] apptainer works
[2025-12-14 00:11:59] Set ATHENA_PROC_NUMBER=9
[2025-12-14 00:11:59] Set ATHENA_CORE_NUMBER=9
[2025-12-14 00:11:59] Starting ATLAS job with PandaID=6929310038
[2025-12-14 00:11:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 07:55:30]  *** The last 200 lines of the pilot log: ***
[2025-12-14 07:55:30] 2025-12-14 12:54:52,956 | INFO     | job 6929310038 has finished - writing final server update
[2025-12-14 07:55:30] 2025-12-14 12:54:52,956 | INFO     | total number of processed events: 400 (read)
[2025-12-14 07:55:30] 2025-12-14 12:54:52,957 | INFO     | executing command: lscpu
[2025-12-14 07:55:30] 2025-12-14 12:54:53,078 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 07:55:30] 2025-12-14 12:54:54,914 | INFO     | time since job start (27701s) is within the limit (174528.0s)
[2025-12-14 07:55:30] 2025-12-14 12:54:55,347 | INFO     | monitor loop #1375: job 0:6929310038 is in state 'finished'
[2025-12-14 07:55:30] 2025-12-14 12:54:55,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 07:55:30] 2025-12-14 12:54:56,922 | INFO     | time since job start (27703s) is within the limit (174528.0s)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,580 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 07:55:30] 2025-12-14 12:54:57,584 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2964.912892857142
[2025-12-14 07:55:30] 2025-12-14 12:54:57,593 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6929310038/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,594 | INFO     | extracted standard info from prmon json
[2025-12-14 07:55:30] 2025-12-14 12:54:57,594 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 07:55:30] 2025-12-14 12:54:57,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 07:55:30] 2025-12-14 12:54:57,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 07:55:30] 2025-12-14 12:54:57,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 07:55:30] 2025-12-14 12:54:57,602 | INFO     | fitting pss+swap vs Time
[2025-12-14 07:55:30] 2025-12-14 12:54:57,603 | INFO     | sum of square deviations: 28633140814.90934
[2025-12-14 07:55:30] 2025-12-14 12:54:57,607 | INFO     | sum of deviations: 155716195671.29187
[2025-12-14 07:55:30] 2025-12-14 12:54:57,607 | INFO     | mean x: 1765703131.5951328
[2025-12-14 07:55:30] 2025-12-14 12:54:57,607 | INFO     | mean y: 2507482.132743363
[2025-12-14 07:55:30] 2025-12-14 12:54:57,607 | INFO     | intersect: -9599951993.556847
[2025-12-14 07:55:30] 2025-12-14 12:54:57,608 | INFO     | chi2: 4.850115585643115
[2025-12-14 07:55:30] 2025-12-14 12:54:57,609 | INFO     | sum of square deviations: 27693387379.668774
[2025-12-14 07:55:30] 2025-12-14 12:54:57,613 | INFO     | sum of deviations: 186884036058.6489
[2025-12-14 07:55:30] 2025-12-14 12:54:57,613 | INFO     | mean x: 1765702979.098434
[2025-12-14 07:55:30] 2025-12-14 12:54:57,613 | INFO     | mean y: 2512489.2125279643
[2025-12-14 07:55:30] 2025-12-14 12:54:57,613 | INFO     | intersect: -11913028744.177834
[2025-12-14 07:55:30] 2025-12-14 12:54:57,614 | INFO     | chi2: 3.8729929477364315
[2025-12-14 07:55:30] 2025-12-14 12:54:57,614 | INFO     | current chi2=3.8729929477364315 (change=20.146378383209584 %)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,614 | INFO     | right removable region: 446
[2025-12-14 07:55:30] 2025-12-14 12:54:57,614 | INFO     | sum of square deviations: 27693250249.266308
[2025-12-14 07:55:30] 2025-12-14 12:54:57,618 | INFO     | sum of deviations: 19731816182.357895
[2025-12-14 07:55:30] 2025-12-14 12:54:57,619 | INFO     | mean x: 1765703284.1029084
[2025-12-14 07:55:30] 2025-12-14 12:54:57,619 | INFO     | mean y: 2529520.340044743
[2025-12-14 07:55:30] 2025-12-14 12:54:57,619 | INFO     | intersect: -1255558003.5477407
[2025-12-14 07:55:30] 2025-12-14 12:54:57,619 | INFO     | chi2: 1.5490086484486056
[2025-12-14 07:55:30] 2025-12-14 12:54:57,620 | INFO     | current chi2=1.5490086484486056 (change=68.06243849045897 %)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,620 | INFO     | sum of square deviations: 26774205795.50232
[2025-12-14 07:55:30] 2025-12-14 12:54:57,624 | INFO     | sum of deviations: -22179384262.97737
[2025-12-14 07:55:30] 2025-12-14 12:54:57,624 | INFO     | mean x: 1765703436.606335
[2025-12-14 07:55:30] 2025-12-14 12:54:57,624 | INFO     | mean y: 2536465.5633484162
[2025-12-14 07:55:30] 2025-12-14 12:54:57,624 | INFO     | intersect: 1465220935.6113937
[2025-12-14 07:55:30] 2025-12-14 12:54:57,625 | INFO     | chi2: 1.2389621852168264
[2025-12-14 07:55:30] 2025-12-14 12:54:57,625 | INFO     | current chi2=1.2389621852168264 (change=20.0157993657623 %)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,625 | INFO     | left removable region: 20
[2025-12-14 07:55:30] 2025-12-14 12:54:57,626 | INFO     | sum of square deviations: 23970392030.863834
[2025-12-14 07:55:30] 2025-12-14 12:54:57,629 | INFO     | sum of deviations: -23041039897.97652
[2025-12-14 07:55:30] 2025-12-14 12:54:57,630 | INFO     | mean x: 1765703558.6150234
[2025-12-14 07:55:30] 2025-12-14 12:54:57,630 | INFO     | mean y: 2547618.1525821597
[2025-12-14 07:55:30] 2025-12-14 12:54:57,630 | INFO     | intersect: 1699793374.0694802
[2025-12-14 07:55:30] 2025-12-14 12:54:57,630 | INFO     | chi2: 0.12446931735072914
[2025-12-14 07:55:30] 2025-12-14 12:54:57,631 | INFO     | current memory leak: -0.96 B/s (using 426 data points, chi2=0.12)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,631 | INFO     | could have reported an average CPU frequency of 2929 MHz (18 samples)
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | ..............................
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . Timing measurements:
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . get job = 0 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . initial setup = 8 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . payload setup = 51 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . stage-in = 0 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . payload execution = 27551 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . stage-out = 2 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | . log creation = 0 s
[2025-12-14 07:55:30] 2025-12-14 12:54:57,632 | INFO     | ..............................
[2025-12-14 07:55:30] 2025-12-14 12:54:58,025 | INFO     | 
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | job summary report
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | --------------------------------------------------
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | PanDA job id: 6929310038
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | task id: 47886831
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | errors: (none)
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | pilot state: finished 
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | transexitcode: 0
[2025-12-14 07:55:30] 2025-12-14 12:54:58,027 | INFO     | exeerrorcode: 0
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | exeerrordiag: 
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | exitcode: 0
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | exitmsg: OK
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | cpuconsumptiontime: 44457 s
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | nevents: 400
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | neventsw: 0
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | pid: 287703
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | pgrp: 287703
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | corecount: 9
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | event service: False
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | sizes: {0: 2283160, 1: 2283761, 2: 2283845, 3: 2283873, 4: 2283873, 5: 2284256, 17: 2284256, 28: 2284284, 39: 2284312, 41: 2284602, 51: 2284630, 27607: 2321253, 27
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | --------------------------------------------------
[2025-12-14 07:55:30] 2025-12-14 12:54:58,028 | INFO     | 
[2025-12-14 07:55:30] 2025-12-14 12:54:58,029 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-14 07:55:30] 2025-12-14 12:54:58,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,051 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,051 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 07:55:30] 2025-12-14 12:54:58,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 07:55:30] 2025-12-14 12:54:58,053 | INFO     | job 6929310038 has completed (purged errors)
[2025-12-14 07:55:30] 2025-12-14 12:54:58,053 | INFO     | overall cleanup function is called
[2025-12-14 07:55:30] 2025-12-14 12:54:59,061 | INFO     | --- collectZombieJob: --- 10, [287703]
[2025-12-14 07:55:30] 2025-12-14 12:54:59,062 | INFO     | zombie collector waiting for pid 287703
[2025-12-14 07:55:30] 2025-12-14 12:54:59,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 07:55:30] 2025-12-14 12:54:59,062 | INFO     | collected zombie processes
[2025-12-14 07:55:30] 2025-12-14 12:54:59,062 | INFO     | will attempt to kill all subprocesses of pid=287703
[2025-12-14 07:55:30] 2025-12-14 12:54:59,850 | INFO     | process IDs to be killed: [287703] (in reverse order)
[2025-12-14 07:55:30] 2025-12-14 12:55:00,077 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 07:55:30] 2025-12-14 12:55:00,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 07:55:30] 2025-12-14 12:55:00,128 | INFO     | did not find any defunct processes belonging to 287703
[2025-12-14 07:55:30] 2025-12-14 12:55:00,149 | INFO     | did not find any defunct processes belonging to 287703
[2025-12-14 07:55:30] 2025-12-14 12:55:00,149 | INFO     | ready for new job
[2025-12-14 07:55:30] 2025-12-14 12:55:00,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 07:55:30] 2025-12-14 12:55:00,156 | INFO     | ***************************************
[2025-12-14 07:55:30] 2025-12-14 12:55:00,156 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 07:55:30] 2025-12-14 12:55:00,156 | INFO     | ***************************************
[2025-12-14 07:55:30] 2025-12-14 12:55:00,156 | INFO     | 
[2025-12-14 07:55:30] 2025-12-14 12:55:00,167 | INFO     | architecture information:
[2025-12-14 07:55:30] 2025-12-14 12:55:00,176 | INFO     | executing command: cat /etc/os-release
[2025-12-14 07:55:30] 2025-12-14 12:55:00,238 | INFO     | cat /etc/os-release:
[2025-12-14 07:55:30] NAME="CentOS Linux"
[2025-12-14 07:55:30] VERSION="7 (Core)"
[2025-12-14 07:55:30] ID="centos"
[2025-12-14 07:55:30] ID_LIKE="rhel fedora"
[2025-12-14 07:55:30] VERSION_ID="7"
[2025-12-14 07:55:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 07:55:30] ANSI_COLOR="0;31"
[2025-12-14 07:55:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 07:55:30] HOME_URL="https://www.centos.org/"
[2025-12-14 07:55:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 07:55:30] 
[2025-12-14 07:55:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 07:55:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 07:55:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 07:55:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 07:55:30] 
[2025-12-14 07:55:30] 2025-12-14 12:55:00,238 | INFO     | ***************************************
[2025-12-14 07:55:30] 2025-12-14 12:55:00,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-14 07:55:30] 2025-12-14 12:55:00,817 | INFO     | sufficient remaining disk space (75977719808 B)
[2025-12-14 07:55:30] 2025-12-14 12:55:00,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 07:55:30] 2025-12-14 12:55:00,817 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 07:55:30] 2025-12-14 12:55:00,817 | INFO     | update_server=False
[2025-12-14 07:55:30] 2025-12-14 12:55:00,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 07:55:30] 2025-12-14 12:55:00,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 07:55:30] 2025-12-14 12:55:00,820 | INFO     | all payload control threads have been joined
[2025-12-14 07:55:30] 2025-12-14 12:55:00,879 | INFO     | all job control threads have been joined
[2025-12-14 07:55:30] 2025-12-14 12:55:01,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:55:30] 2025-12-14 12:55:01,378 | INFO     | aborting loop
[2025-12-14 07:55:30] 2025-12-14 12:55:01,627 | INFO     | all data control threads have been joined
[2025-12-14 07:55:30] 2025-12-14 12:55:01,822 | INFO     | [job] retrieve thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:01,825 | INFO     | [payload] control thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:01,885 | INFO     | [job] control thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,304 | INFO     | [payload] failed_post thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,307 | INFO     | [payload] validate_post thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,383 | INFO     | [job] job monitor thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,387 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,506 | INFO     | [data] copytool_in thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,632 | INFO     | [data] control thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,641 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:02,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:55:30] 2025-12-14 12:55:02,823 | INFO     | [data] copytool_out thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:03,021 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:03,187 | INFO     | [job] validate thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:03,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 07:55:30] 2025-12-14 12:55:03,765 | INFO     | [job] queue monitor thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:05,341 | INFO     | [monitor] cgroup control has ended
[2025-12-14 07:55:30] 2025-12-14 12:55:07,433 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:11,049 | INFO     | job.realtimelogging is not enabled
[2025-12-14 07:55:30] 2025-12-14 12:55:12,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 07:55:30] 2025-12-14 12:55:12,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673112028992)>', '<ExcThread(monitor, started 139672378394368)>']
[2025-12-14 07:55:30] 2025-12-14 12:55:17,411 | INFO     | all workflow threads have been joined
[2025-12-14 07:55:30] 2025-12-14 12:55:17,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 07:55:30] 2025-12-14 12:55:17,413 | INFO     | traces error code: 0
[2025-12-14 07:55:30] 2025-12-14 12:55:17,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 07:55:30] 2025-12-14 12:55:30,412 | INFO     | PID=258278 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 07:55:30] 2025-12-14 12:55:30,414 | INFO     | .. there are 18 such processes running
[2025-12-14 07:55:30] 2025-12-14 12:55:30,415 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 07:55:30] 2025-12-14 12:55:30,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 07:55:30] 2025-12-14 12:55:30,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 07:55:30] 2025-12-14 12:55:30,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 07:55:30] 2025-12-14 12:55:30,415 | INFO     | [monitor] control thread has ended
[2025-12-14 07:55:30] 2025-12-14 12:55:30,629 [wrapper] ==== pilot stdout END ====
[2025-12-14 07:55:30] 2025-12-14 12:55:30,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 07:55:30] 2025-12-14 12:55:30,660 [wrapper] pilotpid: 258278
[2025-12-14 07:55:30] 2025-12-14 12:55:30,663 [wrapper] Pilot exit status: 0
[2025-12-14 07:55:30] 2025-12-14 12:55:30,680 [wrapper] pandaids: 6929310038
[2025-12-14 07:55:30] 2025-12-14 12:55:30,783 [wrapper] cleanup supervisor_pilot 1793988 258279
[2025-12-14 07:55:30] 2025-12-14 12:55:30,788 [wrapper] Test setup, not cleaning
[2025-12-14 07:55:30] 2025-12-14 12:55:30,791 [wrapper] apfmon messages muted
[2025-12-14 07:55:30] 2025-12-14 12:55:30,795 [wrapper] ==== wrapper stdout END ====
[2025-12-14 07:55:30] 2025-12-14 12:55:30,798 [wrapper] ==== wrapper stderr END ====
[2025-12-14 07:55:30]  *** Error codes and diagnostics ***
[2025-12-14 07:55:30]     "exeErrorCode": 0,
[2025-12-14 07:55:30]     "exeErrorDiag": "",
[2025-12-14 07:55:30]     "pilotErrorCode": 0,
[2025-12-14 07:55:30]     "pilotErrorDiag": "",
[2025-12-14 07:55:30]  *** Listing of results directory ***
[2025-12-14 07:55:30] total 343536
[2025-12-14 07:55:30] -rwx------. 1 boincer umatlas     36322 Dec 13 08:47 runpilot2-wrapper.sh
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:50 pilot3.tar.gz
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:52 queuedata.json
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 07:55:30] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:11 run_atlas
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:11 job.xml
[2025-12-14 07:55:30] -rw-r--r--. 2 boincer umatlas 192246038 Dec 14 00:11 EVNT.47886829._000193.pool.root.1
[2025-12-14 07:55:30] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:11 start_atlas.sh
[2025-12-14 07:55:30] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:11 shared
[2025-12-14 07:55:30] -rw-r--r--. 2 boincer umatlas    592415 Dec 14 00:11 input.tar.gz
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:11 boinc_lockfile
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas      2537 Dec 14 00:11 pandaJob.out
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas        57 Dec 14 00:12 setup.sh.local
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas    991728 Dec 14 00:13 agis_schedconf.cvmfs.json
[2025-12-14 07:55:30] drwx------. 5 boincer umatlas      4096 Dec 14 00:13 pilot3
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas      6843 Dec 14 07:47 init_data.xml
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas 148275781 Dec 14 07:54 HITS.47886831._004811.pool.root.1
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas       531 Dec 14 07:54 boinc_task_state.xml
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas      1039 Dec 14 07:54 memory_monitor_summary.json
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas   1516240 Dec 14 07:54 agis_ddmendpoints.agis.ALL.json
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas    598285 Dec 14 07:54 log.47886831._004811.job.log.tgz.1
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas      7822 Dec 14 07:54 heartbeat.json
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas        95 Dec 14 07:54 pilot_heartbeat.json
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 07:55 boinc_mmap_file
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas        28 Dec 14 07:55 wrapper_checkpoint.txt
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas       822 Dec 14 07:55 pilotlog.txt
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas   3069121 Dec 14 07:55 log.47886831._004811.job.log.1
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas       357 Dec 14 07:55 output.list
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas       620 Dec 14 07:55 runtime_log
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas   3686400 Dec 14 07:55 result.tar.gz
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas       657 Dec 14 07:55 StFNDmc9eo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqnTKDmjBSern.diag
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas      9348 Dec 14 07:55 runtime_log.err
[2025-12-14 07:55:30] -rw-r--r--. 1 boincer umatlas     21437 Dec 14 07:55 stderr.txt
[2025-12-14 07:55:30] HITS file was successfully produced:
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas 148275781 Dec 14 07:54 shared/HITS.pool.root.1
[2025-12-14 07:55:30]  *** Contents of shared directory: ***
[2025-12-14 07:55:30] total 336752
[2025-12-14 07:55:30] -rw-r--r--. 2 boincer umatlas 192246038 Dec 14 00:11 ATLAS.root_0
[2025-12-14 07:55:30] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:11 start_atlas.sh
[2025-12-14 07:55:30] -rw-r--r--. 2 boincer umatlas    592415 Dec 14 00:11 input.tar.gz
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas 148275781 Dec 14 07:54 HITS.pool.root.1
[2025-12-14 07:55:30] -rw-------. 1 boincer umatlas   3686400 Dec 14 07:55 result.tar.gz
07:55:32 (245312): run_atlas exited; CPU time 45290.903137
07:55:32 (245312): called boinc_finish(0)

</stderr_txt>
]]>

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