Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:32:23 (2602116): wrapper (7.7.26015): starting
15:32:23 (2602116): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 15:32:23] Arguments: --nthreads 8
[2025-12-14 15:32:23] Threads: 8
[2025-12-14 15:32:23] Checking for CVMFS
[2025-12-14 15:32:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 15:32:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 15:32:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 15:32:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 15:32:26] 2.13.3.0 12022 56319 342928 154007 0 176 30319399 32935936 37524 16776704 0 118015304 99.516 141111819 12088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 15:32:26] CVMFS is ok
[2025-12-14 15:32:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 15:32:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 15:32:26] Further information can be found at the LHC@home message board.
[2025-12-14 15:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 15:32:26] Checking for apptainer binary...
[2025-12-14 15:32:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 15:32:26] Running /usr/bin/apptainer --version
[2025-12-14 15:32:27] apptainer version 1.4.5-2.el9
[2025-12-14 15:32:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 15:32:29] c6-12-25-4.aglt2.org
[2025-12-14 15:32:29] apptainer works
[2025-12-14 15:32:29] Set ATHENA_PROC_NUMBER=8
[2025-12-14 15:32:29] Set ATHENA_CORE_NUMBER=8
[2025-12-14 15:32:29] Starting ATLAS job with PandaID=6929363890
[2025-12-14 15:32:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 03:32:22]  *** The last 200 lines of the pilot log: ***
[2025-12-15 03:32:22] 2025-12-15 08:31:36,148 | INFO     | sum of square deviations: 107729660204.93343
[2025-12-15 03:32:22] 2025-12-15 08:31:36,357 | INFO     | sum of deviations: -137306021246.0271
[2025-12-15 03:32:22] 2025-12-15 08:31:36,357 | INFO     | mean x: 1765766001.4366999
[2025-12-15 03:32:22] 2025-12-15 08:31:36,410 | INFO     | mean y: 2462237.7297297297
[2025-12-15 03:32:22] 2025-12-15 08:31:36,410 | INFO     | intersect: 2253005900.891464
[2025-12-15 03:32:22] 2025-12-15 08:31:36,438 | INFO     | chi2: 9.331026342874777
[2025-12-15 03:32:22] 2025-12-15 08:31:36,450 | INFO     | sum of square deviations: 105447804962.53285
[2025-12-15 03:32:22] 2025-12-15 08:31:36,594 | INFO     | sum of deviations: 91848367470.59647
[2025-12-15 03:32:22] 2025-12-15 08:31:36,595 | INFO     | mean x: 1765765848.9541547
[2025-12-15 03:32:22] 2025-12-15 08:31:36,595 | INFO     | mean y: 2477551.018624642
[2025-12-15 03:32:22] 2025-12-15 08:31:36,596 | INFO     | intersect: -1535560254.6938493
[2025-12-15 03:32:22] 2025-12-15 08:31:36,602 | INFO     | chi2: 5.423532972424609
[2025-12-15 03:32:22] 2025-12-15 08:31:36,603 | INFO     | current chi2=5.423532972424609 (change=41.87635129155917 %)
[2025-12-15 03:32:22] 2025-12-15 08:31:36,610 | INFO     | sum of square deviations: 103197990037.99422
[2025-12-15 03:32:22] 2025-12-15 08:31:36,715 | INFO     | sum of deviations: 232309954653.19452
[2025-12-15 03:32:22] 2025-12-15 08:31:36,715 | INFO     | mean x: 1765765696.4574316
[2025-12-15 03:32:22] 2025-12-15 08:31:36,720 | INFO     | mean y: 2487045.311688312
[2025-12-15 03:32:22] 2025-12-15 08:31:36,720 | INFO     | intersect: -3972444527.688599
[2025-12-15 03:32:22] 2025-12-15 08:31:36,723 | INFO     | chi2: 3.061462678637398
[2025-12-15 03:32:22] 2025-12-15 08:31:36,723 | INFO     | current chi2=3.061462678637398 (change=43.55224363522657 %)
[2025-12-15 03:32:22] 2025-12-15 08:31:36,730 | INFO     | sum of square deviations: 100980196910.51201
[2025-12-15 03:32:22] 2025-12-15 08:31:36,769 | INFO     | sum of deviations: 230444229393.3723
[2025-12-15 03:32:22] 2025-12-15 08:31:36,770 | INFO     | mean x: 1765765543.9534883
[2025-12-15 03:32:22] 2025-12-15 08:31:36,770 | INFO     | mean y: 2486917.011627907
[2025-12-15 03:32:22] 2025-12-15 08:31:36,770 | INFO     | intersect: -4027119803.069657
[2025-12-15 03:32:22] 2025-12-15 08:31:36,773 | INFO     | chi2: 3.06175358060586
[2025-12-15 03:32:22] 2025-12-15 08:31:36,774 | INFO     | current chi2=3.06175358060586 (change=-0.009502058296895393 %)
[2025-12-15 03:32:22] 2025-12-15 08:31:36,774 | INFO     | right removable region: 687
[2025-12-15 03:32:22] 2025-12-15 08:31:36,776 | INFO     | sum of square deviations: 105446802919.43964
[2025-12-15 03:32:22] 2025-12-15 08:31:36,787 | INFO     | monitor loop #1717: job 0:6929363890 is in state 'finished'
[2025-12-15 03:32:22] 2025-12-15 08:31:36,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 03:32:22] 2025-12-15 08:31:36,817 | INFO     | sum of deviations: -322976301630.5044
[2025-12-15 03:32:22] 2025-12-15 08:31:36,817 | INFO     | mean x: 1765766153.952722
[2025-12-15 03:32:22] 2025-12-15 08:31:36,818 | INFO     | mean y: 2474628.318051576
[2025-12-15 03:32:22] 2025-12-15 08:31:36,818 | INFO     | intersect: 5410894856.89221
[2025-12-15 03:32:22] 2025-12-15 08:31:36,821 | INFO     | chi2: 6.682696988253049
[2025-12-15 03:32:22] 2025-12-15 08:31:36,821 | INFO     | current chi2=6.682696988253049 (change=28.381972757412765 %)
[2025-12-15 03:32:22] 2025-12-15 08:31:36,823 | INFO     | sum of square deviations: 103196538858.3838
[2025-12-15 03:32:22] 2025-12-15 08:31:36,867 | INFO     | sum of deviations: -366815514056.0203
[2025-12-15 03:32:22] 2025-12-15 08:31:36,868 | INFO     | mean x: 1765766306.4646466
[2025-12-15 03:32:22] 2025-12-15 08:31:36,868 | INFO     | mean y: 2477595.5093795094
[2025-12-15 03:32:22] 2025-12-15 08:31:36,869 | INFO     | intersect: 6278952393.7337675
[2025-12-15 03:32:22] 2025-12-15 08:31:36,871 | INFO     | chi2: 6.512214416359465
[2025-12-15 03:32:22] 2025-12-15 08:31:36,872 | INFO     | current chi2=6.512214416359465 (change=2.5511043249942476 %)
[2025-12-15 03:32:22] 2025-12-15 08:31:36,872 | INFO     | left removable region: 20
[2025-12-15 03:32:22] 2025-12-15 08:31:36,874 | INFO     | sum of square deviations: 92011881356.66594
[2025-12-15 03:32:22] 2025-12-15 08:31:37,073 | INFO     | sum of deviations: -5993642778.877039
[2025-12-15 03:32:22] 2025-12-15 08:31:37,074 | INFO     | mean x: 1765766123.4887557
[2025-12-15 03:32:22] 2025-12-15 08:31:37,074 | INFO     | mean y: 2503441.8830584707
[2025-12-15 03:32:22] 2025-12-15 08:31:37,075 | INFO     | intersect: 117525232.75601897
[2025-12-15 03:32:22] 2025-12-15 08:31:37,083 | INFO     | chi2: 0.13451803018926267
[2025-12-15 03:32:22] 2025-12-15 08:31:37,111 | INFO     | current memory leak: -0.07 B/s (using 667 data points, chi2=0.13)
[2025-12-15 03:32:22] 2025-12-15 08:31:37,113 | INFO     | could have reported an average CPU frequency of 1000 MHz (27 samples)
[2025-12-15 03:32:22] 2025-12-15 08:31:37,114 | INFO     | ..............................
[2025-12-15 03:32:22] 2025-12-15 08:31:37,114 | INFO     | . Timing measurements:
[2025-12-15 03:32:22] 2025-12-15 08:31:37,114 | INFO     | . get job = 0 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,114 | INFO     | . initial setup = 5 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,114 | INFO     | . payload setup = 45 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,115 | INFO     | . stage-in = 0 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,115 | INFO     | . payload execution = 42883 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,115 | INFO     | . stage-out = 7 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,115 | INFO     | . log creation = 0 s
[2025-12-15 03:32:22] 2025-12-15 08:31:37,115 | INFO     | ..............................
[2025-12-15 03:32:22] 2025-12-15 08:31:38,090 | INFO     | 
[2025-12-15 03:32:22] 2025-12-15 08:31:38,091 | INFO     | job summary report
[2025-12-15 03:32:22] 2025-12-15 08:31:38,116 | INFO     | --------------------------------------------------
[2025-12-15 03:32:22] 2025-12-15 08:31:38,116 | INFO     | PanDA job id: 6929363890
[2025-12-15 03:32:22] 2025-12-15 08:31:38,116 | INFO     | task id: 47898763
[2025-12-15 03:32:22] 2025-12-15 08:31:38,117 | INFO     | errors: (none)
[2025-12-15 03:32:22] 2025-12-15 08:31:38,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 03:32:22] 2025-12-15 08:31:38,117 | INFO     | pilot state: finished 
[2025-12-15 03:32:22] 2025-12-15 08:31:38,117 | INFO     | transexitcode: 0
[2025-12-15 03:32:22] 2025-12-15 08:31:38,117 | INFO     | exeerrorcode: 0
[2025-12-15 03:32:22] 2025-12-15 08:31:38,118 | INFO     | exeerrordiag: 
[2025-12-15 03:32:22] 2025-12-15 08:31:38,118 | INFO     | exitcode: 0
[2025-12-15 03:32:22] 2025-12-15 08:31:38,118 | INFO     | exitmsg: OK
[2025-12-15 03:32:22] 2025-12-15 08:31:38,118 | INFO     | cpuconsumptiontime: 169156 s
[2025-12-15 03:32:22] 2025-12-15 08:31:38,118 | INFO     | nevents: 400
[2025-12-15 03:32:22] 2025-12-15 08:31:38,118 | INFO     | neventsw: 0
[2025-12-15 03:32:22] 2025-12-15 08:31:38,119 | INFO     | pid: 2633183
[2025-12-15 03:32:22] 2025-12-15 08:31:38,119 | INFO     | pgrp: 2633183
[2025-12-15 03:32:22] 2025-12-15 08:31:38,119 | INFO     | corecount: 8
[2025-12-15 03:32:22] 2025-12-15 08:31:38,119 | INFO     | event service: False
[2025-12-15 03:32:22] 2025-12-15 08:31:38,121 | INFO     | sizes: {0: 2283124, 1: 2283809, 3: 2283837, 4: 2284008, 5: 2284036, 16: 2284092, 28: 2284248, 37: 2284538, 39: 2284566, 42935: 2326345, 42936: 2326344, 42944: 2335
[2025-12-15 03:32:22] 2025-12-15 08:31:38,122 | INFO     | --------------------------------------------------
[2025-12-15 03:32:22] 2025-12-15 08:31:38,122 | INFO     | 
[2025-12-15 03:32:22] 2025-12-15 08:31:38,122 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-15 03:32:22] 2025-12-15 08:31:38,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 03:32:22] 2025-12-15 08:31:38,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 03:32:22] 2025-12-15 08:31:38,305 | INFO     | job 6929363890 has completed (purged errors)
[2025-12-15 03:32:22] 2025-12-15 08:31:38,306 | INFO     | overall cleanup function is called
[2025-12-15 03:32:22] 2025-12-15 08:31:39,503 | INFO     | --- collectZombieJob: --- 10, [2633183]
[2025-12-15 03:32:22] 2025-12-15 08:31:39,503 | INFO     | zombie collector waiting for pid 2633183
[2025-12-15 03:32:22] 2025-12-15 08:31:39,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 03:32:22] 2025-12-15 08:31:39,504 | INFO     | collected zombie processes
[2025-12-15 03:32:22] 2025-12-15 08:31:39,504 | INFO     | will attempt to kill all subprocesses of pid=2633183
[2025-12-15 03:32:22] 2025-12-15 08:31:43,213 | INFO     | PID=2611292 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 03:32:22] 2025-12-15 08:31:43,214 | INFO     | .. there are 45 such processes running
[2025-12-15 03:32:22] 2025-12-15 08:31:44,317 | INFO     | process IDs to be killed: [2633183] (in reverse order)
[2025-12-15 03:32:22] 2025-12-15 08:31:44,782 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 03:32:22] 2025-12-15 08:31:44,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 03:32:22] 2025-12-15 08:31:44,951 | INFO     | did not find any defunct processes belonging to 2633183
[2025-12-15 03:32:22] 2025-12-15 08:31:45,108 | INFO     | did not find any defunct processes belonging to 2633183
[2025-12-15 03:32:22] 2025-12-15 08:31:45,109 | INFO     | ready for new job
[2025-12-15 03:32:22] 2025-12-15 08:31:45,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 03:32:22] 2025-12-15 08:31:45,137 | INFO     | ***************************************
[2025-12-15 03:32:22] 2025-12-15 08:31:45,138 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 03:32:22] 2025-12-15 08:31:45,138 | INFO     | ***************************************
[2025-12-15 03:32:22] 2025-12-15 08:31:45,138 | INFO     | 
[2025-12-15 03:32:22] 2025-12-15 08:31:45,168 | INFO     | architecture information:
[2025-12-15 03:32:22] 2025-12-15 08:31:45,175 | INFO     | executing command: cat /etc/os-release
[2025-12-15 03:32:22] 2025-12-15 08:31:45,275 | INFO     | cat /etc/os-release:
[2025-12-15 03:32:22] NAME="CentOS Linux"
[2025-12-15 03:32:22] VERSION="7 (Core)"
[2025-12-15 03:32:22] ID="centos"
[2025-12-15 03:32:22] ID_LIKE="rhel fedora"
[2025-12-15 03:32:22] VERSION_ID="7"
[2025-12-15 03:32:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 03:32:22] ANSI_COLOR="0;31"
[2025-12-15 03:32:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 03:32:22] HOME_URL="https://www.centos.org/"
[2025-12-15 03:32:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 03:32:22] 
[2025-12-15 03:32:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 03:32:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 03:32:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 03:32:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 03:32:22] 
[2025-12-15 03:32:22] 2025-12-15 08:31:45,276 | INFO     | ***************************************
[2025-12-15 03:32:22] 2025-12-15 08:31:45,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-15 03:32:22] 2025-12-15 08:31:45,951 | INFO     | sufficient remaining disk space (93255106560 B)
[2025-12-15 03:32:22] 2025-12-15 08:31:45,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 03:32:22] 2025-12-15 08:31:45,968 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 03:32:22] 2025-12-15 08:31:45,968 | INFO     | update_server=False
[2025-12-15 03:32:22] 2025-12-15 08:31:45,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 03:32:22] 2025-12-15 08:31:45,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 03:32:22] 2025-12-15 08:31:45,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:32:22] 2025-12-15 08:31:45,992 | INFO     | aborting loop
[2025-12-15 03:32:22] 2025-12-15 08:31:46,034 | INFO     | all job control threads have been joined
[2025-12-15 03:32:22] 2025-12-15 08:31:46,194 | INFO     | all data control threads have been joined
[2025-12-15 03:32:22] 2025-12-15 08:31:46,975 | INFO     | [job] retrieve thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:46,999 | INFO     | [job] job monitor thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,040 | INFO     | [job] control thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 03:32:22] 2025-12-15 08:31:47,202 | INFO     | [data] control thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,260 | INFO     | all payload control threads have been joined
[2025-12-15 03:32:22] 2025-12-15 08:31:47,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 03:32:22] 2025-12-15 08:31:47,448 | INFO     | [payload] validate_post thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,521 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,651 | INFO     | [data] copytool_in thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,652 | INFO     | [job] validate thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:47,986 | INFO     | [data] copytool_out thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:48,145 | INFO     | [job] queue monitor thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:48,179 | INFO     | [payload] failed_post thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:48,264 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:48,272 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:48,295 | INFO     | [payload] control thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:31:51,387 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 03:32:22] 2025-12-15 08:32:13,103 | INFO     | [monitor] cgroup control has ended
[2025-12-15 03:32:22] 2025-12-15 08:32:15,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662216869696)>', '<ExcThread(monitor, started 140660917139200)>']
[2025-12-15 03:32:22] 2025-12-15 08:32:18,235 | INFO     | PID=2611292 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 03:32:22] 2025-12-15 08:32:18,235 | INFO     | .. there are 45 such processes running
[2025-12-15 03:32:22] 2025-12-15 08:32:18,238 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 03:32:22] 2025-12-15 08:32:18,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 03:32:22] 2025-12-15 08:32:18,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 03:32:22] 2025-12-15 08:32:18,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 03:32:22] 2025-12-15 08:32:18,240 | INFO     | [monitor] control thread has ended
[2025-12-15 03:32:22] 2025-12-15 08:32:20,085 | INFO     | all workflow threads have been joined
[2025-12-15 03:32:22] 2025-12-15 08:32:20,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 03:32:22] 2025-12-15 08:32:20,086 | INFO     | traces error code: 0
[2025-12-15 03:32:22] 2025-12-15 08:32:20,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 03:32:22] 2025-12-15 08:32:20,504 [wrapper] ==== pilot stdout END ====
[2025-12-15 03:32:22] 2025-12-15 08:32:20,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 03:32:22] 2025-12-15 08:32:20,514 [wrapper] pilotpid: 2611292
[2025-12-15 03:32:22] 2025-12-15 08:32:20,519 [wrapper] Pilot exit status: 0
[2025-12-15 03:32:22] 2025-12-15 08:32:20,619 [wrapper] pandaids: 6929363890
[2025-12-15 03:32:22] 2025-12-15 08:32:21,666 [wrapper] cleanup supervisor_pilot  758617 2611293
[2025-12-15 03:32:22] 2025-12-15 08:32:21,702 [wrapper] Test setup, not cleaning
[2025-12-15 03:32:22] 2025-12-15 08:32:21,725 [wrapper] apfmon messages muted
[2025-12-15 03:32:22] 2025-12-15 08:32:21,761 [wrapper] ==== wrapper stdout END ====
[2025-12-15 03:32:22] 2025-12-15 08:32:21,794 [wrapper] ==== wrapper stderr END ====
[2025-12-15 03:32:22]  *** Error codes and diagnostics ***
[2025-12-15 03:32:22]     "exeErrorCode": 0,
[2025-12-15 03:32:22]     "exeErrorDiag": "",
[2025-12-15 03:32:22]     "pilotErrorCode": 0,
[2025-12-15 03:32:22]     "pilotErrorDiag": "",
[2025-12-15 03:32:22]  *** Listing of results directory ***
[2025-12-15 03:32:22] total 450080
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-15 03:32:22] -rwx------. 1 boincer umatlas     36322 Dec 13 16:23 runpilot2-wrapper.sh
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 16:25 queuedata.json
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas       100 Dec 14 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 03:32:22] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 15:32 run_atlas
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas       105 Dec 14 15:32 job.xml
[2025-12-15 03:32:22] -rw-r--r--. 2 boincer umatlas 223394672 Dec 14 15:32 EVNT.47898761._000160.pool.root.1
[2025-12-15 03:32:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 15:32 start_atlas.sh
[2025-12-15 03:32:22] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 15:32 shared
[2025-12-15 03:32:22] -rw-r--r--. 2 boincer umatlas    592401 Dec 14 15:32 input.tar.gz
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas         0 Dec 14 15:32 boinc_lockfile
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas      2504 Dec 14 15:32 pandaJob.out
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas        57 Dec 14 15:32 setup.sh.local
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas    991024 Dec 14 15:33 agis_schedconf.cvmfs.json
[2025-12-15 03:32:22] drwx------. 5 boincer umatlas      4096 Dec 14 15:33 pilot3
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas 223899435 Dec 15 03:21 HITS.47898763._007107.pool.root.1
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas       532 Dec 15 03:22 boinc_task_state.xml
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas      6879 Dec 15 03:29 init_data.xml
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas      1057 Dec 15 03:30 memory_monitor_summary.json
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas   1516240 Dec 15 03:30 agis_ddmendpoints.agis.ALL.json
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas    727499 Dec 15 03:30 log.47898763._007107.job.log.tgz.1
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas      7832 Dec 15 03:31 heartbeat.json
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas        95 Dec 15 03:32 pilot_heartbeat.json
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 03:32 boinc_mmap_file
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas        29 Dec 15 03:32 wrapper_checkpoint.txt
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas      4824 Dec 15 03:32 pilotlog.txt
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas   4112372 Dec 15 03:32 log.47898763._007107.job.log.1
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas       357 Dec 15 03:32 output.list
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas       620 Dec 15 03:32 runtime_log
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas   4853760 Dec 15 03:32 result.tar.gz
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas      9353 Dec 15 03:32 runtime_log.err
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas       662 Dec 15 03:32 KE0LDmCGmo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwLQKDmqHkfhn.diag
[2025-12-15 03:32:22] -rw-r--r--. 1 boincer umatlas     21241 Dec 15 03:32 stderr.txt
[2025-12-15 03:32:22] HITS file was successfully produced:
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas 223899435 Dec 15 03:21 shared/HITS.pool.root.1
[2025-12-15 03:32:22]  *** Contents of shared directory: ***
[2025-12-15 03:32:22] total 442156
[2025-12-15 03:32:22] -rw-r--r--. 2 boincer umatlas 223394672 Dec 14 15:32 ATLAS.root_0
[2025-12-15 03:32:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 15:32 start_atlas.sh
[2025-12-15 03:32:22] -rw-r--r--. 2 boincer umatlas    592401 Dec 14 15:32 input.tar.gz
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas 223899435 Dec 15 03:21 HITS.pool.root.1
[2025-12-15 03:32:22] -rw-------. 1 boincer umatlas   4853760 Dec 15 03:32 result.tar.gz
03:32:24 (2602116): run_atlas exited; CPU time 173402.841701
03:32:24 (2602116): called boinc_finish(0)

</stderr_txt>
]]>

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