Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:25 (3936766): wrapper (7.7.26015): starting
00:04:25 (3936766): wrapper: running run_atlas (--nthreads 9)
[2025-12-14 00:04:25] Arguments: --nthreads 9
[2025-12-14 00:04:25] Threads: 9
[2025-12-14 00:04:25] Checking for CVMFS
[2025-12-14 00:04:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:04:30] 2.13.3.0 12022 55391 371796 153984 0 410 18194423 32935937 41809 16776704 0 115291098 99.519 137665486 12156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:04:30] CVMFS is ok
[2025-12-14 00:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:04:30] Further information can be found at the LHC@home message board.
[2025-12-14 00:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:04:30] Checking for apptainer binary...
[2025-12-14 00:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:04:30] Running /usr/bin/apptainer --version
[2025-12-14 00:04:30] apptainer version 1.4.5-2.el9
[2025-12-14 00:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:04:32] c6-12-25-4.aglt2.org
[2025-12-14 00:04:32] apptainer works
[2025-12-14 00:04:32] Set ATHENA_PROC_NUMBER=9
[2025-12-14 00:04:32] Set ATHENA_CORE_NUMBER=9
[2025-12-14 00:04:32] Starting ATLAS job with PandaID=6929716243
[2025-12-14 00:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 15:31:59]  *** The last 200 lines of the pilot log: ***
[2025-12-14 15:31:59] 2025-12-14 16:13:38,467 | INFO     | extracted standard info from prmon json
[2025-12-14 15:31:59] 2025-12-14 16:13:38,468 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 15:31:59] 2025-12-14 16:13:38,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 15:31:59] 2025-12-14 16:13:38,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 15:31:59] 2025-12-14 16:13:38,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 15:31:59] 2025-12-14 16:13:38,646 | INFO     | time since job start (40019s) is within the limit (174528.0s)
[2025-12-14 15:31:59] 2025-12-14 16:13:38,956 | INFO     | fitting pss+swap vs Time
[2025-12-14 15:31:59] 2025-12-14 16:13:39,060 | INFO     | sum of square deviations: 85546900427.78198
[2025-12-14 15:31:59] 2025-12-14 16:13:39,490 | INFO     | sum of deviations: 621466578019.2416
[2025-12-14 15:31:59] 2025-12-14 16:13:39,491 | INFO     | mean x: 1765708895.703533
[2025-12-14 15:31:59] 2025-12-14 16:13:39,491 | INFO     | mean y: 2473295.503840246
[2025-12-14 15:31:59] 2025-12-14 16:13:39,491 | INFO     | intersect: -12824748493.99121
[2025-12-14 15:31:59] 2025-12-14 16:13:39,555 | INFO     | chi2: 9.232073169104842
[2025-12-14 15:31:59] 2025-12-14 16:13:39,558 | INFO     | sum of square deviations: 83590899216.20436
[2025-12-14 15:31:59] 2025-12-14 16:13:40,175 | INFO     | sum of deviations: 746606687959.5685
[2025-12-14 15:31:59] 2025-12-14 16:13:40,176 | INFO     | mean x: 1765708743.2074304
[2025-12-14 15:31:59] 2025-12-14 16:13:40,176 | INFO     | mean y: 2483022.047987616
[2025-12-14 15:31:59] 2025-12-14 16:13:40,176 | INFO     | intersect: -15768252417.197021
[2025-12-14 15:31:59] 2025-12-14 16:13:40,200 | INFO     | chi2: 6.967435254461142
[2025-12-14 15:31:59] 2025-12-14 16:13:40,200 | INFO     | current chi2=6.967435254461142 (change=24.5301122853133 %)
[2025-12-14 15:31:59] 2025-12-14 16:13:40,201 | INFO     | right removable region: 645
[2025-12-14 15:31:59] 2025-12-14 16:13:40,270 | INFO     | sum of square deviations: 83590579149.94603
[2025-12-14 15:31:59] 2025-12-14 16:13:40,619 | INFO     | sum of deviations: 412328221838.2968
[2025-12-14 15:31:59] 2025-12-14 16:13:40,620 | INFO     | mean x: 1765709048.2120743
[2025-12-14 15:31:59] 2025-12-14 16:13:40,620 | INFO     | mean y: 2489591.8080495354
[2025-12-14 15:31:59] 2025-12-14 16:13:40,621 | INFO     | intersect: -8707243963.537775
[2025-12-14 15:31:59] 2025-12-14 16:13:40,672 | INFO     | chi2: 5.463294198955771
[2025-12-14 15:31:59] 2025-12-14 16:13:40,673 | INFO     | current chi2=5.463294198955771 (change=40.822672233158855 %)
[2025-12-14 15:31:59] 2025-12-14 16:13:40,726 | INFO     | monitor loop #1009: job 0:6929716243 is in state 'finished'
[2025-12-14 15:31:59] 2025-12-14 16:13:40,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 15:31:59] 2025-12-14 16:13:40,675 | INFO     | sum of square deviations: 81664226496.12497
[2025-12-14 15:31:59] 2025-12-14 16:13:40,826 | INFO     | sum of deviations: 262931882674.64557
[2025-12-14 15:31:59] 2025-12-14 16:13:40,827 | INFO     | mean x: 1765709200.7238688
[2025-12-14 15:31:59] 2025-12-14 16:13:40,827 | INFO     | mean y: 2501414.546021841
[2025-12-14 15:31:59] 2025-12-14 16:13:40,828 | INFO     | intersect: -5682500015.355479
[2025-12-14 15:31:59] 2025-12-14 16:13:40,857 | INFO     | chi2: 3.634209776370058
[2025-12-14 15:31:59] 2025-12-14 16:13:40,885 | INFO     | current chi2=3.634209776370058 (change=33.47951539815147 %)
[2025-12-14 15:31:59] 2025-12-14 16:13:40,888 | INFO     | sum of square deviations: 79767883747.94186
[2025-12-14 15:31:59] 2025-12-14 16:13:41,119 | INFO     | sum of deviations: 182712143000.0218
[2025-12-14 15:31:59] 2025-12-14 16:13:41,119 | INFO     | mean x: 1765709353.2279875
[2025-12-14 15:31:59] 2025-12-14 16:13:41,120 | INFO     | mean y: 2507863.751572327
[2025-12-14 15:31:59] 2025-12-14 16:13:41,120 | INFO     | intersect: -4041933641.84111
[2025-12-14 15:31:59] 2025-12-14 16:13:41,133 | INFO     | time since job start (40022s) is within the limit (174528.0s)
[2025-12-14 15:31:59] 2025-12-14 16:13:41,154 | INFO     | chi2: 3.139106591452025
[2025-12-14 15:31:59] 2025-12-14 16:13:41,154 | INFO     | current chi2=3.139106591452025 (change=13.623406885789475 %)
[2025-12-14 15:31:59] 2025-12-14 16:13:41,155 | INFO     | left removable region: 30
[2025-12-14 15:31:59] 2025-12-14 16:13:41,157 | INFO     | sum of square deviations: 72123975415.40807
[2025-12-14 15:31:59] 2025-12-14 16:13:41,703 | INFO     | sum of deviations: 156673864759.8523
[2025-12-14 15:31:59] 2025-12-14 16:13:41,704 | INFO     | mean x: 1765709627.7430894
[2025-12-14 15:31:59] 2025-12-14 16:13:41,704 | INFO     | mean y: 2530793.4357723575
[2025-12-14 15:31:59] 2025-12-14 16:13:41,809 | INFO     | intersect: -3833094597.827538
[2025-12-14 15:31:59] 2025-12-14 16:13:41,812 | INFO     | chi2: 0.22427310024125285
[2025-12-14 15:31:59] 2025-12-14 16:13:41,812 | INFO     | current memory leak: 2.17 B/s (using 615 data points, chi2=0.22)
[2025-12-14 15:31:59] 2025-12-14 16:13:41,826 | INFO     | could have reported an average CPU frequency of 999 MHz (25 samples)
[2025-12-14 15:31:59] 2025-12-14 16:13:41,827 | INFO     | ..............................
[2025-12-14 15:31:59] 2025-12-14 16:13:41,827 | INFO     | . Timing measurements:
[2025-12-14 15:31:59] 2025-12-14 16:13:41,827 | INFO     | . get job = 1 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,828 | INFO     | . initial setup = 8 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,828 | INFO     | . payload setup = 84 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,828 | INFO     | . stage-in = 0 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,828 | INFO     | . payload execution = 39732 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,828 | INFO     | . stage-out = 17 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,829 | INFO     | . log creation = 8 s
[2025-12-14 15:31:59] 2025-12-14 16:13:41,829 | INFO     | ..............................
[2025-12-14 15:31:59] 2025-12-14 16:13:43,218 | INFO     | time since job start (40024s) is within the limit (174528.0s)
[2025-12-14 15:31:59] 2025-12-14 16:13:45,034 | INFO     | 
[2025-12-14 15:31:59] 2025-12-14 16:13:45,035 | INFO     | job summary report
[2025-12-14 15:31:59] 2025-12-14 16:13:45,035 | INFO     | --------------------------------------------------
[2025-12-14 15:31:59] 2025-12-14 16:13:45,035 | INFO     | PanDA job id: 6929716243
[2025-12-14 15:31:59] 2025-12-14 16:13:45,035 | INFO     | task id: 47899042
[2025-12-14 15:31:59] 2025-12-14 16:13:45,036 | INFO     | errors: (none)
[2025-12-14 15:31:59] 2025-12-14 16:13:45,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 15:31:59] 2025-12-14 16:13:45,036 | INFO     | pilot state: finished 
[2025-12-14 15:31:59] 2025-12-14 16:13:45,036 | INFO     | transexitcode: 0
[2025-12-14 15:31:59] 2025-12-14 16:13:45,037 | INFO     | exeerrorcode: 0
[2025-12-14 15:31:59] 2025-12-14 16:13:45,037 | INFO     | exeerrordiag: 
[2025-12-14 15:31:59] 2025-12-14 16:13:45,037 | INFO     | exitcode: 0
[2025-12-14 15:31:59] 2025-12-14 16:13:45,037 | INFO     | exitmsg: OK
[2025-12-14 15:31:59] 2025-12-14 16:13:45,037 | INFO     | cpuconsumptiontime: 107695 s
[2025-12-14 15:31:59] 2025-12-14 16:13:45,047 | INFO     | nevents: 400
[2025-12-14 15:31:59] 2025-12-14 16:13:45,047 | INFO     | neventsw: 0
[2025-12-14 15:31:59] 2025-12-14 16:13:45,047 | INFO     | pid: 4000686
[2025-12-14 15:31:59] 2025-12-14 16:13:45,048 | INFO     | pgrp: 4000686
[2025-12-14 15:31:59] 2025-12-14 16:13:45,048 | INFO     | corecount: 9
[2025-12-14 15:31:59] 2025-12-14 16:13:45,048 | INFO     | event service: False
[2025-12-14 15:31:59] 2025-12-14 16:13:45,048 | INFO     | sizes: {0: 2283107, 2: 2283792, 3: 2283792, 4: 2284019, 5: 2284019, 17: 2284075, 31: 2284231, 43: 2284259, 56: 2284287, 64: 2284577, 68: 2284633, 39824: 2317720, 3
[2025-12-14 15:31:59] 2025-12-14 16:13:45,049 | INFO     | --------------------------------------------------
[2025-12-14 15:31:59] 2025-12-14 16:13:45,049 | INFO     | 
[2025-12-14 15:31:59] 2025-12-14 16:13:45,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-12-14 15:31:59] 2025-12-14 16:13:45,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 15:31:59] 2025-12-14 16:13:45,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 15:31:59] 2025-12-14 16:13:45,319 | INFO     | job 6929716243 has completed (purged errors)
[2025-12-14 15:31:59] 2025-12-14 16:13:45,319 | INFO     | overall cleanup function is called
[2025-12-14 15:31:59] 2025-12-14 16:13:46,399 | INFO     | --- collectZombieJob: --- 10, [4000686]
[2025-12-14 15:31:59] 2025-12-14 16:13:46,399 | INFO     | zombie collector waiting for pid 4000686
[2025-12-14 15:31:59] 2025-12-14 16:13:46,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 15:31:59] 2025-12-14 16:13:46,400 | INFO     | collected zombie processes
[2025-12-14 15:31:59] 2025-12-14 16:13:46,400 | INFO     | will attempt to kill all subprocesses of pid=4000686
[2025-12-14 15:31:59] 2025-12-14 16:13:52,533 | INFO     | process IDs to be killed: [4000686] (in reverse order)
[2025-12-14 15:31:59] 2025-12-14 16:13:57,900 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 15:31:59] 2025-12-14 16:13:57,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 15:31:59] 2025-12-14 16:13:58,287 | INFO     | did not find any defunct processes belonging to 4000686
[2025-12-14 15:31:59] 2025-12-14 16:13:58,589 | INFO     | did not find any defunct processes belonging to 4000686
[2025-12-14 15:31:59] 2025-12-14 16:13:58,589 | INFO     | ready for new job
[2025-12-14 15:31:59] 2025-12-14 16:13:58,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 15:31:59] 2025-12-14 16:13:58,635 | INFO     | ***************************************
[2025-12-14 15:31:59] 2025-12-14 16:13:58,635 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 15:31:59] 2025-12-14 16:13:58,636 | INFO     | ***************************************
[2025-12-14 15:31:59] 2025-12-14 16:13:58,636 | INFO     | 
[2025-12-14 15:31:59] 2025-12-14 16:13:58,748 | INFO     | architecture information:
[2025-12-14 15:31:59] 2025-12-14 16:13:58,757 | INFO     | executing command: cat /etc/os-release
[2025-12-14 15:31:59] 2025-12-14 16:13:59,018 | INFO     | cat /etc/os-release:
[2025-12-14 15:31:59] NAME="CentOS Linux"
[2025-12-14 15:31:59] VERSION="7 (Core)"
[2025-12-14 15:31:59] ID="centos"
[2025-12-14 15:31:59] ID_LIKE="rhel fedora"
[2025-12-14 15:31:59] VERSION_ID="7"
[2025-12-14 15:31:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 15:31:59] ANSI_COLOR="0;31"
[2025-12-14 15:31:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 15:31:59] HOME_URL="https://www.centos.org/"
[2025-12-14 15:31:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 15:31:59] 
[2025-12-14 15:31:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 15:31:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 15:31:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 15:31:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 15:31:59] 
[2025-12-14 15:31:59] 2025-12-14 16:13:59,019 | INFO     | ***************************************
[2025-12-14 15:31:59] 2025-12-14 16:13:59,523 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-12-14 15:31:59] 2025-12-14 16:13:59,727 | INFO     | sufficient remaining disk space (92811558912 B)
[2025-12-14 15:31:59] 2025-12-14 16:13:59,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 15:31:59] 2025-12-14 16:13:59,728 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 15:31:59] 2025-12-14 16:13:59,728 | INFO     | update_server=False
[2025-12-14 15:31:59] 2025-12-14 16:13:59,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 15:31:59] 2025-12-14 16:13:59,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 15:31:59] 2025-12-14 16:13:59,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 15:31:59] 2025-12-14 16:13:59,758 | INFO     | all data control threads have been joined
[2025-12-14 15:31:59] 2025-12-14 16:13:59,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:31:59] 2025-12-14 16:13:59,759 | INFO     | aborting loop
[2025-12-14 15:31:59] 2025-12-14 16:14:00,510 | INFO     | all payload control threads have been joined
[2025-12-14 15:31:59] 2025-12-14 16:14:00,735 | INFO     | [job] retrieve thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:00,764 | INFO     | [data] control thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:00,769 | INFO     | [job] job monitor thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:01,223 | INFO     | all job control threads have been joined
[2025-12-14 15:31:59] 2025-12-14 16:14:01,360 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:01,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:01,362 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:01,418 | INFO     | [job] validate thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:01,516 | INFO     | [payload] control thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:01,755 | INFO     | [data] copytool_out thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:02,028 | INFO     | [data] copytool_in thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:02,099 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:02,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:31:59] 2025-12-14 16:14:02,203 | INFO     | [payload] validate_post thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:02,254 | INFO     | [job] control thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:02,316 | INFO     | [payload] failed_post thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:03,194 | INFO     | [job] queue monitor thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:03,428 | INFO     | [monitor] cgroup control has ended
[2025-12-14 15:31:59] 2025-12-14 16:14:03,760 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 15:31:59] 2025-12-14 16:14:04,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939539269440)>', '<ExcThread(monitor, started 139938817369856)>']
[2025-12-14 15:31:59] 2025-12-14 16:14:09,819 | INFO     | all workflow threads have been joined
[2025-12-14 15:31:59] 2025-12-14 16:14:09,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 15:31:59] 2025-12-14 16:14:09,820 | INFO     | traces error code: 0
[2025-12-14 15:31:59] 2025-12-14 16:14:09,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 15:31:59] 2025-12-14 16:14:22,224 | INFO     | PID=3957445 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 15:31:59] 2025-12-14 16:14:22,224 | INFO     | .. there are 53 such processes running
[2025-12-14 15:31:59] 2025-12-14 16:14:22,230 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 15:31:59] 2025-12-14 16:14:22,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 15:31:59] 2025-12-14 16:14:22,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 15:31:59] 2025-12-14 16:14:22,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 15:31:59] 2025-12-14 16:14:22,231 | INFO     | [monitor] control thread has ended
[2025-12-14 15:31:59] 2025-12-14 16:14:28,894 [wrapper] ==== pilot stdout END ====
[2025-12-14 15:31:59] 2025-12-14 16:14:29,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 15:31:59] 2025-12-14 16:14:29,027 [wrapper] pilotpid: 3957445
[2025-12-14 15:31:59] 2025-12-14 16:14:29,061 [wrapper] Pilot exit status: 0
[2025-12-14 15:31:59] 2025-12-14 16:14:29,240 [wrapper] pandaids: 6929716243
[2025-12-14 15:31:59] 2025-12-14 16:14:29,998 [wrapper] cleanup supervisor_pilot 1842129 3957446
[2025-12-14 15:31:59] 2025-12-14 16:14:30,015 [wrapper] Test setup, not cleaning
[2025-12-14 15:31:59] 2025-12-14 16:14:30,029 [wrapper] apfmon messages muted
[2025-12-14 15:31:59] 2025-12-14 16:14:30,046 [wrapper] ==== wrapper stdout END ====
[2025-12-14 15:31:59] 2025-12-14 16:14:30,061 [wrapper] ==== wrapper stderr END ====
[2025-12-14 15:31:59]  *** Error codes and diagnostics ***
[2025-12-14 15:31:59]     "exeErrorCode": 0,
[2025-12-14 15:31:59]     "exeErrorDiag": "",
[2025-12-14 15:31:59]     "pilotErrorCode": 0,
[2025-12-14 15:31:59]     "pilotErrorDiag": "",
[2025-12-14 15:31:59]  *** Listing of results directory ***
[2025-12-14 15:31:59] total 371508
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-14 15:31:59] -rwx------. 1 boincer umatlas     36322 Dec 13 16:22 runpilot2-wrapper.sh
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 16:25 queuedata.json
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 15:31:59] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:04 run_atlas
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:04 job.xml
[2025-12-14 15:31:59] -rw-r--r--. 2 boincer umatlas 197091125 Dec 14 00:04 EVNT.47899040._000100.pool.root.1
[2025-12-14 15:31:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:04 start_atlas.sh
[2025-12-14 15:31:59] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:04 shared
[2025-12-14 15:31:59] -rw-r--r--. 2 boincer umatlas    592391 Dec 14 00:04 input.tar.gz
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:04 boinc_lockfile
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas      2492 Dec 14 00:04 pandaJob.out
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas        57 Dec 14 00:04 setup.sh.local
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas    991728 Dec 14 00:06 agis_schedconf.cvmfs.json
[2025-12-14 15:31:59] drwx------. 5 boincer umatlas      4096 Dec 14 00:06 pilot3
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas 172459816 Dec 14 11:09 HITS.47899042._002000.pool.root.1
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas       531 Dec 14 11:09 boinc_task_state.xml
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas      1040 Dec 14 11:12 memory_monitor_summary.json
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas   1516240 Dec 14 11:12 agis_ddmendpoints.agis.ALL.json
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas    658375 Dec 14 11:12 log.47899042._002000.job.log.tgz.1
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas      6220 Dec 14 11:13 heartbeat.json
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas        96 Dec 14 11:14 pilot_heartbeat.json
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas       823 Dec 14 11:14 pilotlog.txt
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas   2821244 Dec 14 11:14 log.47899042._002000.job.log.1
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas       357 Dec 14 11:14 output.list
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas       620 Dec 14 11:14 runtime_log
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas   3502080 Dec 14 11:14 result.tar.gz
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas       661 Dec 14 11:14 wT7NDmxFmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCTUKDmhH0wHo.diag
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas      9353 Dec 14 11:14 runtime_log.err
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas      6878 Dec 14 15:30 init_data.xml
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas        28 Dec 14 15:31 wrapper_checkpoint.txt
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 15:31 boinc_mmap_file
[2025-12-14 15:31:59] -rw-r--r--. 1 boincer umatlas     21202 Dec 14 15:31 stderr.txt
[2025-12-14 15:31:59] HITS file was successfully produced:
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas 172459816 Dec 14 11:09 shared/HITS.pool.root.1
[2025-12-14 15:31:59]  *** Contents of shared directory: ***
[2025-12-14 15:31:59] total 364912
[2025-12-14 15:31:59] -rw-r--r--. 2 boincer umatlas 197091125 Dec 14 00:04 ATLAS.root_0
[2025-12-14 15:31:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:04 start_atlas.sh
[2025-12-14 15:31:59] -rw-r--r--. 2 boincer umatlas    592391 Dec 14 00:04 input.tar.gz
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas 172459816 Dec 14 11:09 HITS.pool.root.1
[2025-12-14 15:31:59] -rw-------. 1 boincer umatlas   3502080 Dec 14 11:14 result.tar.gz
15:32:00 (3936766): run_atlas exited; CPU time 110505.525109
15:32:00 (3936766): called boinc_finish(0)

</stderr_txt>
]]>

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