Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:09:57 (3845615): wrapper (7.7.26015): starting
06:09:57 (3845615): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 06:09:57] Arguments: --nthreads 12
[2025-12-14 06:09:57] Threads: 12
[2025-12-14 06:09:57] Checking for CVMFS
[2025-12-14 06:09:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 06:09:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 06:09:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 06:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 06:09:58] 2.13.2.0 9432 59683 238976 153993 1 174 29680789 39288832 7407 16776704 0 46543975 99.682 42498944 39340 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 06:09:58] CVMFS is ok
[2025-12-14 06:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 06:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 06:09:58] Further information can be found at the LHC@home message board.
[2025-12-14 06:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 06:09:58] Checking for apptainer binary...
[2025-12-14 06:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 06:09:58] Running /usr/bin/apptainer --version
[2025-12-14 06:09:58] apptainer version 1.4.4-1.el9
[2025-12-14 06:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 06:09:58] c-211-5.aglt2.org
[2025-12-14 06:09:58] apptainer works
[2025-12-14 06:09:58] Set ATHENA_PROC_NUMBER=12
[2025-12-14 06:09:58] Set ATHENA_CORE_NUMBER=12
[2025-12-14 06:09:58] Starting ATLAS job with PandaID=6929365213
[2025-12-14 06:09:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 07:59:32]  *** The last 200 lines of the pilot log: ***
[2025-12-14 07:59:32] 2025-12-14 12:58:42,538 | INFO     | time since job start (6508s) is within the limit (174528.0s)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,548 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 07:59:32] 2025-12-14 12:58:43,592 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.164675000001
[2025-12-14 07:59:32] 2025-12-14 12:58:43,601 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929365213/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,602 | INFO     | extracted standard info from prmon json
[2025-12-14 07:59:32] 2025-12-14 12:58:43,602 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 07:59:32] 2025-12-14 12:58:43,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 07:59:32] 2025-12-14 12:58:43,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 07:59:32] 2025-12-14 12:58:43,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 07:59:32] 2025-12-14 12:58:43,606 | INFO     | fitting pss+swap vs Time
[2025-12-14 07:59:32] 2025-12-14 12:58:43,606 | INFO     | sum of square deviations: 369242323.1415091
[2025-12-14 07:59:32] 2025-12-14 12:58:43,607 | INFO     | sum of deviations: 10957468778.33019
[2025-12-14 07:59:32] 2025-12-14 12:58:43,607 | INFO     | mean x: 1765713849.6132076
[2025-12-14 07:59:32] 2025-12-14 12:58:43,607 | INFO     | mean y: 2685613.7641509436
[2025-12-14 07:59:32] 2025-12-14 12:58:43,607 | INFO     | intersect: -52395842848.49737
[2025-12-14 07:59:32] 2025-12-14 12:58:43,607 | INFO     | chi2: 1.3530228041738124
[2025-12-14 07:59:32] 2025-12-14 12:58:43,608 | INFO     | sum of square deviations: 319412490.5742575
[2025-12-14 07:59:32] 2025-12-14 12:58:43,608 | INFO     | sum of deviations: 10701288550.85149
[2025-12-14 07:59:32] 2025-12-14 12:58:43,608 | INFO     | mean x: 1765713697.1188118
[2025-12-14 07:59:32] 2025-12-14 12:58:43,609 | INFO     | mean y: 2684832.7623762377
[2025-12-14 07:59:32] 2025-12-14 12:58:43,609 | INFO     | intersect: -59154086829.76083
[2025-12-14 07:59:32] 2025-12-14 12:58:43,609 | INFO     | chi2: 1.3552767739638043
[2025-12-14 07:59:32] 2025-12-14 12:58:43,609 | INFO     | current chi2=1.3552767739638043 (change=-0.16658771626308655 %)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,609 | INFO     | right removable region: 100
[2025-12-14 07:59:32] 2025-12-14 12:58:43,609 | INFO     | sum of square deviations: 319405170.5742575
[2025-12-14 07:59:32] 2025-12-14 12:58:43,610 | INFO     | sum of deviations: -4924470824.811875
[2025-12-14 07:59:32] 2025-12-14 12:58:43,610 | INFO     | mean x: 1765714002.1188118
[2025-12-14 07:59:32] 2025-12-14 12:58:43,610 | INFO     | mean y: 2733102.900990099
[2025-12-14 07:59:32] 2025-12-14 12:58:43,610 | INFO     | intersect: 27225858742.23494
[2025-12-14 07:59:32] 2025-12-14 12:58:43,611 | INFO     | chi2: 0.010733653086355328
[2025-12-14 07:59:32] 2025-12-14 12:58:43,611 | INFO     | current chi2=0.010733653086355328 (change=99.20669089587817 %)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,611 | INFO     | sum of square deviations: 274290661.3333326
[2025-12-14 07:59:32] 2025-12-14 12:58:43,612 | INFO     | sum of deviations: -5346414128.166666
[2025-12-14 07:59:32] 2025-12-14 12:58:43,612 | INFO     | mean x: 1765714154.5833333
[2025-12-14 07:59:32] 2025-12-14 12:58:43,612 | INFO     | mean y: 2734459.8958333335
[2025-12-14 07:59:32] 2025-12-14 12:58:43,612 | INFO     | intersect: 34419652106.595856
[2025-12-14 07:59:32] 2025-12-14 12:58:43,612 | INFO     | chi2: 0.004753443829172503
[2025-12-14 07:59:32] 2025-12-14 12:58:43,612 | INFO     | current chi2=0.004753443829172503 (change=55.71457554171278 %)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,613 | INFO     | sum of square deviations: 233617691.29670343
[2025-12-14 07:59:32] 2025-12-14 12:58:43,613 | INFO     | sum of deviations: -4632092848.725272
[2025-12-14 07:59:32] 2025-12-14 12:58:43,613 | INFO     | mean x: 1765714307.087912
[2025-12-14 07:59:32] 2025-12-14 12:58:43,613 | INFO     | mean y: 2731761.340659341
[2025-12-14 07:59:32] 2025-12-14 12:58:43,613 | INFO     | intersect: 35012719957.68078
[2025-12-14 07:59:32] 2025-12-14 12:58:43,614 | INFO     | chi2: 0.004628167098646104
[2025-12-14 07:59:32] 2025-12-14 12:58:43,614 | INFO     | current chi2=0.004628167098646104 (change=2.635494076054061 %)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,614 | INFO     | left removable region: 30
[2025-12-14 07:59:32] 2025-12-14 12:58:43,614 | INFO     | sum of square deviations: 106317244.98571433
[2025-12-14 07:59:32] 2025-12-14 12:58:43,614 | INFO     | sum of deviations: -1265076839.242857
[2025-12-14 07:59:32] 2025-12-14 12:58:43,615 | INFO     | mean x: 1765714581.5857143
[2025-12-14 07:59:32] 2025-12-14 12:58:43,615 | INFO     | mean y: 2718186.9571428574
[2025-12-14 07:59:32] 2025-12-14 12:58:43,615 | INFO     | intersect: 21013087879.828945
[2025-12-14 07:59:32] 2025-12-14 12:58:43,615 | INFO     | chi2: 0.0006684069784666414
[2025-12-14 07:59:32] 2025-12-14 12:58:43,615 | INFO     | current memory leak: -11.90 B/s (using 70 data points, chi2=0.00)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | ..............................
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | . Timing measurements:
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | . get job = 0 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | . initial setup = 3 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | . payload setup = 7 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,616 | INFO     | . stage-in = 0 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,617 | INFO     | . payload execution = 6467 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,617 | INFO     | . stage-out = 1 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,617 | INFO     | . log creation = 0 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,617 | INFO     | ..............................
[2025-12-14 07:59:32] 2025-12-14 12:58:43,845 | INFO     | 
[2025-12-14 07:59:32] 2025-12-14 12:58:43,846 | INFO     | job summary report
[2025-12-14 07:59:32] 2025-12-14 12:58:43,846 | INFO     | --------------------------------------------------
[2025-12-14 07:59:32] 2025-12-14 12:58:43,846 | INFO     | PanDA job id: 6929365213
[2025-12-14 07:59:32] 2025-12-14 12:58:43,846 | INFO     | task id: 47899042
[2025-12-14 07:59:32] 2025-12-14 12:58:43,846 | INFO     | errors: (none)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | pilot state: finished 
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | transexitcode: 0
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | exeerrorcode: 0
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | exeerrordiag: 
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | exitcode: 0
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | exitmsg: OK
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | cpuconsumptiontime: 45193 s
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | nevents: 400
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | neventsw: 0
[2025-12-14 07:59:32] 2025-12-14 12:58:43,847 | INFO     | pid: 3857919
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | pgrp: 3857919
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | corecount: 12
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | event service: False
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | sizes: {0: 2283759, 1: 2283958, 7: 2284220, 12: 2284248, 6478: 2311200, 6479: 2311199, 6480: 2320381, 6482: 2320437, 6492: 2320631}
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | --------------------------------------------------
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | 
[2025-12-14 07:59:32] 2025-12-14 12:58:43,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 07:59:32] 2025-12-14 12:58:43,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,869 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 07:59:32] 2025-12-14 12:58:43,871 | INFO     | job 6929365213 has completed (purged errors)
[2025-12-14 07:59:32] 2025-12-14 12:58:43,872 | INFO     | overall cleanup function is called
[2025-12-14 07:59:32] 2025-12-14 12:58:44,885 | INFO     | --- collectZombieJob: --- 10, [3857919]
[2025-12-14 07:59:32] 2025-12-14 12:58:44,886 | INFO     | zombie collector waiting for pid 3857919
[2025-12-14 07:59:32] 2025-12-14 12:58:44,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 07:59:32] 2025-12-14 12:58:44,886 | INFO     | collected zombie processes
[2025-12-14 07:59:32] 2025-12-14 12:58:44,886 | INFO     | will attempt to kill all subprocesses of pid=3857919
[2025-12-14 07:59:32] 2025-12-14 12:58:45,229 | INFO     | process IDs to be killed: [3857919] (in reverse order)
[2025-12-14 07:59:32] 2025-12-14 12:58:45,293 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 07:59:32] 2025-12-14 12:58:45,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 07:59:32] 2025-12-14 12:58:45,301 | INFO     | did not find any defunct processes belonging to 3857919
[2025-12-14 07:59:32] 2025-12-14 12:58:45,307 | INFO     | did not find any defunct processes belonging to 3857919
[2025-12-14 07:59:32] 2025-12-14 12:58:45,307 | INFO     | ready for new job
[2025-12-14 07:59:32] 2025-12-14 12:58:45,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 07:59:32] 2025-12-14 12:58:45,309 | INFO     | ***************************************
[2025-12-14 07:59:32] 2025-12-14 12:58:45,309 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 07:59:32] 2025-12-14 12:58:45,309 | INFO     | ***************************************
[2025-12-14 07:59:32] 2025-12-14 12:58:45,310 | INFO     | 
[2025-12-14 07:59:32] 2025-12-14 12:58:45,311 | INFO     | architecture information:
[2025-12-14 07:59:32] 2025-12-14 12:58:45,312 | INFO     | executing command: cat /etc/os-release
[2025-12-14 07:59:32] 2025-12-14 12:58:45,323 | INFO     | cat /etc/os-release:
[2025-12-14 07:59:32] NAME="CentOS Linux"
[2025-12-14 07:59:32] VERSION="7 (Core)"
[2025-12-14 07:59:32] ID="centos"
[2025-12-14 07:59:32] ID_LIKE="rhel fedora"
[2025-12-14 07:59:32] VERSION_ID="7"
[2025-12-14 07:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 07:59:32] ANSI_COLOR="0;31"
[2025-12-14 07:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 07:59:32] HOME_URL="https://www.centos.org/"
[2025-12-14 07:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 07:59:32] 
[2025-12-14 07:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 07:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 07:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 07:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 07:59:32] 
[2025-12-14 07:59:32] 2025-12-14 12:58:45,324 | INFO     | ***************************************
[2025-12-14 07:59:32] 2025-12-14 12:58:45,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 07:59:32] 2025-12-14 12:58:45,843 | INFO     | sufficient remaining disk space (53198454784 B)
[2025-12-14 07:59:32] 2025-12-14 12:58:45,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 07:59:32] 2025-12-14 12:58:45,843 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 07:59:32] 2025-12-14 12:58:45,843 | INFO     | update_server=False
[2025-12-14 07:59:32] 2025-12-14 12:58:45,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 07:59:32] 2025-12-14 12:58:45,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:59:32] 2025-12-14 12:58:45,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 07:59:32] 2025-12-14 12:58:45,844 | INFO     | aborting loop
[2025-12-14 07:59:32] 2025-12-14 12:58:45,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 07:59:32] 2025-12-14 12:58:46,260 | INFO     | all payload control threads have been joined
[2025-12-14 07:59:32] 2025-12-14 12:58:46,596 | INFO     | all data control threads have been joined
[2025-12-14 07:59:32] 2025-12-14 12:58:46,725 | INFO     | all job control threads have been joined
[2025-12-14 07:59:32] 2025-12-14 12:58:46,861 | INFO     | [job] retrieve thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:46,862 | INFO     | [job] queue monitor thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:46,862 | INFO     | [job] job monitor thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,267 | INFO     | [payload] control thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,396 | INFO     | [payload] failed_post thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,489 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,603 | INFO     | [data] control thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,669 | INFO     | [data] copytool_in thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,732 | INFO     | [job] control thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,774 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:47,851 | INFO     | [data] copytool_out thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:48,055 | INFO     | [payload] validate_post thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:48,226 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:48,276 | INFO     | [job] validate thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:49,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 07:59:32] 2025-12-14 12:58:53,221 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:58:56,835 | INFO     | job.realtimelogging is not enabled
[2025-12-14 07:59:32] 2025-12-14 12:58:57,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 07:59:32] 2025-12-14 12:59:15,928 | INFO     | PID=3851150 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 07:59:32] 2025-12-14 12:59:15,928 | INFO     | .. there are 7 such processes running
[2025-12-14 07:59:32] 2025-12-14 12:59:15,928 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 07:59:32] 2025-12-14 12:59:15,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 07:59:32] 2025-12-14 12:59:15,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 07:59:32] 2025-12-14 12:59:24,862 | INFO     | [monitor] cgroup control has ended
[2025-12-14 07:59:32] 2025-12-14 12:59:26,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240985851712)>', '<ExcThread(monitor, started 140240639469312)>']
[2025-12-14 07:59:32] 2025-12-14 12:59:27,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 07:59:32] 2025-12-14 12:59:27,008 | INFO     | [monitor] control thread has ended
[2025-12-14 07:59:32] 2025-12-14 12:59:31,634 | INFO     | all workflow threads have been joined
[2025-12-14 07:59:32] 2025-12-14 12:59:31,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 07:59:32] 2025-12-14 12:59:31,635 | INFO     | traces error code: 0
[2025-12-14 07:59:32] 2025-12-14 12:59:31,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 07:59:32] 2025-12-14 12:59:31,955 [wrapper] ==== pilot stdout END ====
[2025-12-14 07:59:32] 2025-12-14 12:59:31,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 07:59:32] 2025-12-14 12:59:31,985 [wrapper] pilotpid: 3851150
[2025-12-14 07:59:32] 2025-12-14 12:59:31,988 [wrapper] Pilot exit status: 0
[2025-12-14 07:59:32] 2025-12-14 12:59:32,016 [wrapper] pandaids: 6929365213
[2025-12-14 07:59:32] 2025-12-14 12:59:32,076 [wrapper] cleanup supervisor_pilot 4064271 3851151
[2025-12-14 07:59:32] 2025-12-14 12:59:32,080 [wrapper] Test setup, not cleaning
[2025-12-14 07:59:32] 2025-12-14 12:59:32,082 [wrapper] apfmon messages muted
[2025-12-14 07:59:32] 2025-12-14 12:59:32,084 [wrapper] ==== wrapper stdout END ====
[2025-12-14 07:59:32] 2025-12-14 12:59:32,087 [wrapper] ==== wrapper stderr END ====
[2025-12-14 07:59:32]  *** Error codes and diagnostics ***
[2025-12-14 07:59:32]     "exeErrorCode": 0,
[2025-12-14 07:59:32]     "exeErrorDiag": "",
[2025-12-14 07:59:32]     "pilotErrorCode": 0,
[2025-12-14 07:59:32]     "pilotErrorDiag": "",
[2025-12-14 07:59:32]  *** Listing of results directory ***
[2025-12-14 07:59:32] total 365888
[2025-12-14 07:59:32] -rwx------. 1 boincer umatlas     36322 Dec 13 08:47 runpilot2-wrapper.sh
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 08:50 pilot3.tar.gz
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 08:50 queuedata.json
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas       100 Dec 14 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 07:59:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 06:09 run_atlas
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas       105 Dec 14 06:09 job.xml
[2025-12-14 07:59:32] -rw-r--r--. 2 boincer umatlas 196157213 Dec 14 06:09 EVNT.47899040._000010.pool.root.1
[2025-12-14 07:59:32] -rw-r--r--. 2 boincer umatlas    592387 Dec 14 06:09 input.tar.gz
[2025-12-14 07:59:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 06:09 start_atlas.sh
[2025-12-14 07:59:32] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 06:09 shared
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas         0 Dec 14 06:09 boinc_lockfile
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas      2490 Dec 14 06:09 pandaJob.out
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas        57 Dec 14 06:09 setup.sh.local
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas    991720 Dec 14 06:10 agis_schedconf.cvmfs.json
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas   1516240 Dec 14 06:10 agis_ddmendpoints.agis.ALL.json
[2025-12-14 07:59:32] drwx------. 5 boincer umatlas      4096 Dec 14 06:10 pilot3
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas 171880924 Dec 14 07:57 HITS.47899042._000169.pool.root.1
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas       529 Dec 14 07:57 boinc_task_state.xml
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas      6658 Dec 14 07:57 init_data.xml
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas        95 Dec 14 07:58 pilot_heartbeat.json
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas      1044 Dec 14 07:58 memory_monitor_summary.json
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas    424369 Dec 14 07:58 log.47899042._000169.job.log.tgz.1
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas      7817 Dec 14 07:58 heartbeat.json
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas        27 Dec 14 07:59 wrapper_checkpoint.txt
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas      4895 Dec 14 07:59 pilotlog.txt
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas    930379 Dec 14 07:59 log.47899042._000169.job.log.1
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas       357 Dec 14 07:59 output.list
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas       620 Dec 14 07:59 runtime_log
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas   1372160 Dec 14 07:59 result.tar.gz
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas      9339 Dec 14 07:59 runtime_log.err
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas       652 Dec 14 07:59 hBwKDmR9eo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmadPKDmhIdDkm.diag
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 07:59 boinc_mmap_file
[2025-12-14 07:59:32] -rw-r--r--. 1 boincer umatlas     21183 Dec 14 07:59 stderr.txt
[2025-12-14 07:59:32] HITS file was successfully produced:
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas 171880924 Dec 14 07:57 shared/HITS.pool.root.1
[2025-12-14 07:59:32]  *** Contents of shared directory: ***
[2025-12-14 07:59:32] total 361360
[2025-12-14 07:59:32] -rw-r--r--. 2 boincer umatlas 196157213 Dec 14 06:09 ATLAS.root_0
[2025-12-14 07:59:32] -rw-r--r--. 2 boincer umatlas    592387 Dec 14 06:09 input.tar.gz
[2025-12-14 07:59:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 06:09 start_atlas.sh
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas 171880924 Dec 14 07:57 HITS.pool.root.1
[2025-12-14 07:59:32] -rw-------. 1 boincer umatlas   1372160 Dec 14 07:59 result.tar.gz
07:59:33 (3845615): run_atlas exited; CPU time 45301.986017
07:59:33 (3845615): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN