Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:55 (3933285): wrapper (7.7.26015): starting
00:03:55 (3933285): wrapper: running run_atlas (--nthreads 9)
[2025-12-14 00:03:55] Arguments: --nthreads 9
[2025-12-14 00:03:55] Threads: 9
[2025-12-14 00:03:55] Checking for CVMFS
[2025-12-14 00:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:03:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:03:58] 2.13.3.0 12022 55390 370260 153984 1 410 18179204 32935937 41469 16776704 0 115282994 99.519 137665481 12156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:03:58] CVMFS is ok
[2025-12-14 00:03:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:03:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:03:58] Further information can be found at the LHC@home message board.
[2025-12-14 00:03:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:03:58] Checking for apptainer binary...
[2025-12-14 00:03:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:03:58] Running /usr/bin/apptainer --version
[2025-12-14 00:03:58] apptainer version 1.4.5-2.el9
[2025-12-14 00:03:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:04:00] c6-12-25-4.aglt2.org
[2025-12-14 00:04:00] apptainer works
[2025-12-14 00:04:01] Set ATHENA_PROC_NUMBER=9
[2025-12-14 00:04:01] Set ATHENA_CORE_NUMBER=9
[2025-12-14 00:04:01] Starting ATLAS job with PandaID=6929715956
[2025-12-14 00:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 11:10:20]  *** The last 200 lines of the pilot log: ***
[2025-12-14 11:10:20] 2025-12-14 16:08:58,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 11:10:20] 2025-12-14 16:08:59,260 | INFO     | fitting pss+swap vs Time
[2025-12-14 11:10:20] 2025-12-14 16:08:59,289 | INFO     | sum of square deviations: 83590716445.58044
[2025-12-14 11:10:20] 2025-12-14 16:08:59,552 | INFO     | sum of deviations: 478259985519.958
[2025-12-14 11:10:20] 2025-12-14 16:08:59,553 | INFO     | mean x: 1765708747.9272447
[2025-12-14 11:10:20] 2025-12-14 16:08:59,553 | INFO     | mean y: 2464612.70123839
[2025-12-14 11:10:20] 2025-12-14 16:08:59,553 | INFO     | intersect: -10099947187.60814
[2025-12-14 11:10:20] 2025-12-14 16:08:59,597 | INFO     | chi2: 11.738191518808996
[2025-12-14 11:10:20] 2025-12-14 16:08:59,602 | INFO     | sum of square deviations: 81664942927.81602
[2025-12-14 11:10:20] 2025-12-14 16:08:59,813 | INFO     | sum of deviations: 680539743140.489
[2025-12-14 11:10:20] 2025-12-14 16:08:59,813 | INFO     | mean x: 1765708595.4383776
[2025-12-14 11:10:20] 2025-12-14 16:08:59,814 | INFO     | mean y: 2480630.24024961
[2025-12-14 11:10:20] 2025-12-14 16:08:59,814 | INFO     | intersect: -14711726358.953598
[2025-12-14 11:10:20] 2025-12-14 16:08:59,841 | INFO     | chi2: 8.198313200540644
[2025-12-14 11:10:20] 2025-12-14 16:08:59,841 | INFO     | current chi2=8.198313200540644 (change=30.156931011017633 %)
[2025-12-14 11:10:20] 2025-12-14 16:08:59,853 | INFO     | sum of square deviations: 79768593753.22629
[2025-12-14 11:10:20] 2025-12-14 16:09:00,028 | INFO     | sum of deviations: 718364225463.6132
[2025-12-14 11:10:20] 2025-12-14 16:09:00,029 | INFO     | mean x: 1765708442.9339623
[2025-12-14 11:10:20] 2025-12-14 16:09:00,029 | INFO     | mean y: 2483649.966981132
[2025-12-14 11:10:20] 2025-12-14 16:09:00,030 | INFO     | intersect: -15898784234.068096
[2025-12-14 11:10:20] 2025-12-14 16:09:00,036 | INFO     | chi2: 7.385110023062198
[2025-12-14 11:10:20] 2025-12-14 16:09:00,037 | INFO     | current chi2=7.385110023062198 (change=9.919152362034895 %)
[2025-12-14 11:10:20] 2025-12-14 16:09:00,037 | INFO     | right removable region: 635
[2025-12-14 11:10:20] 2025-12-14 16:09:00,056 | INFO     | sum of square deviations: 81664498241.4321
[2025-12-14 11:10:20] 2025-12-14 16:09:00,286 | INFO     | sum of deviations: 266624538520.9407
[2025-12-14 11:10:20] 2025-12-14 16:09:00,286 | INFO     | mean x: 1765708900.4336975
[2025-12-14 11:10:20] 2025-12-14 16:09:00,287 | INFO     | mean y: 2481361.5397815914
[2025-12-14 11:10:20] 2025-12-14 16:09:00,287 | INFO     | intersect: -5762340940.418642
[2025-12-14 11:10:20] 2025-12-14 16:09:00,391 | INFO     | chi2: 7.801439869395981
[2025-12-14 11:10:20] 2025-12-14 16:09:00,391 | INFO     | current chi2=7.801439869395981 (change=33.537974253570994 %)
[2025-12-14 11:10:20] 2025-12-14 16:09:00,394 | INFO     | sum of square deviations: 79768055570.84798
[2025-12-14 11:10:20] 2025-12-14 16:09:00,606 | INFO     | sum of deviations: 113963623124.32397
[2025-12-14 11:10:20] 2025-12-14 16:09:00,607 | INFO     | mean x: 1765709052.941824
[2025-12-14 11:10:20] 2025-12-14 16:09:00,607 | INFO     | mean y: 2493632.927672956
[2025-12-14 11:10:20] 2025-12-14 16:09:00,607 | INFO     | intersect: -2520152802.6237698
[2025-12-14 11:10:20] 2025-12-14 16:09:00,675 | INFO     | chi2: 5.836680331639569
[2025-12-14 11:10:20] 2025-12-14 16:09:00,676 | INFO     | current chi2=5.836680331639569 (change=25.184575804575577 %)
[2025-12-14 11:10:20] 2025-12-14 16:09:00,684 | INFO     | sum of square deviations: 77901428083.52148
[2025-12-14 11:10:20] 2025-12-14 16:09:00,783 | INFO     | sum of deviations: 26390902613.348595
[2025-12-14 11:10:20] 2025-12-14 16:09:00,784 | INFO     | mean x: 1765709205.4405706
[2025-12-14 11:10:20] 2025-12-14 16:09:00,784 | INFO     | mean y: 2500781.1426307447
[2025-12-14 11:10:20] 2025-12-14 16:09:00,785 | INFO     | intersect: -595673871.5006404
[2025-12-14 11:10:20] 2025-12-14 16:09:00,806 | INFO     | chi2: 5.186834933874732
[2025-12-14 11:10:20] 2025-12-14 16:09:00,807 | INFO     | current chi2=5.186834933874732 (change=11.13381855508077 %)
[2025-12-14 11:10:20] 2025-12-14 16:09:00,807 | INFO     | left removable region: 30
[2025-12-14 11:10:20] 2025-12-14 16:09:00,809 | INFO     | sum of square deviations: 68662530052.413315
[2025-12-14 11:10:20] 2025-12-14 16:09:00,889 | INFO     | sum of deviations: 118679389017.85936
[2025-12-14 11:10:20] 2025-12-14 16:09:00,890 | INFO     | mean x: 1765709327.4628098
[2025-12-14 11:10:20] 2025-12-14 16:09:00,890 | INFO     | mean y: 2533757.4826446283
[2025-12-14 11:10:20] 2025-12-14 16:09:00,891 | INFO     | intersect: -3049397244.862591
[2025-12-14 11:10:20] 2025-12-14 16:09:00,893 | INFO     | chi2: 0.08595872170387642
[2025-12-14 11:10:20] 2025-12-14 16:09:00,893 | INFO     | current memory leak: 1.73 B/s (using 605 data points, chi2=0.09)
[2025-12-14 11:10:20] 2025-12-14 16:09:00,954 | INFO     | could have reported an average CPU frequency of 999 MHz (25 samples)
[2025-12-14 11:10:20] 2025-12-14 16:09:00,954 | INFO     | ..............................
[2025-12-14 11:10:20] 2025-12-14 16:09:00,955 | INFO     | . Timing measurements:
[2025-12-14 11:10:20] 2025-12-14 16:09:00,955 | INFO     | . get job = 0 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,955 | INFO     | . initial setup = 20 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,955 | INFO     | . payload setup = 82 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,955 | INFO     | . stage-in = 3 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,956 | INFO     | . payload execution = 39436 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,956 | INFO     | . stage-out = 20 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,956 | INFO     | . log creation = 1 s
[2025-12-14 11:10:20] 2025-12-14 16:09:00,956 | INFO     | ..............................
[2025-12-14 11:10:20] 2025-12-14 16:09:03,326 | INFO     | 
[2025-12-14 11:10:20] 2025-12-14 16:09:03,344 | INFO     | job summary report
[2025-12-14 11:10:20] 2025-12-14 16:09:03,344 | INFO     | --------------------------------------------------
[2025-12-14 11:10:20] 2025-12-14 16:09:03,345 | INFO     | PanDA job id: 6929715956
[2025-12-14 11:10:20] 2025-12-14 16:09:03,345 | INFO     | task id: 47899042
[2025-12-14 11:10:20] 2025-12-14 16:09:03,345 | INFO     | errors: (none)
[2025-12-14 11:10:20] 2025-12-14 16:09:03,345 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 11:10:20] 2025-12-14 16:09:03,347 | INFO     | pilot state: finished 
[2025-12-14 11:10:20] 2025-12-14 16:09:03,347 | INFO     | transexitcode: 0
[2025-12-14 11:10:20] 2025-12-14 16:09:03,347 | INFO     | exeerrorcode: 0
[2025-12-14 11:10:20] 2025-12-14 16:09:03,347 | INFO     | exeerrordiag: 
[2025-12-14 11:10:20] 2025-12-14 16:09:03,348 | INFO     | exitcode: 0
[2025-12-14 11:10:20] 2025-12-14 16:09:03,348 | INFO     | exitmsg: OK
[2025-12-14 11:10:20] 2025-12-14 16:09:03,348 | INFO     | cpuconsumptiontime: 105762 s
[2025-12-14 11:10:20] 2025-12-14 16:09:03,348 | INFO     | nevents: 400
[2025-12-14 11:10:20] 2025-12-14 16:09:03,349 | INFO     | neventsw: 0
[2025-12-14 11:10:20] 2025-12-14 16:09:03,349 | INFO     | pid: 4001507
[2025-12-14 11:10:20] 2025-12-14 16:09:03,349 | INFO     | pgrp: 4001507
[2025-12-14 11:10:20] 2025-12-14 16:09:03,349 | INFO     | corecount: 9
[2025-12-14 11:10:20] 2025-12-14 16:09:03,349 | INFO     | event service: False
[2025-12-14 11:10:20] 2025-12-14 16:09:03,350 | INFO     | sizes: {0: 2283106, 1: 2283707, 3: 2283791, 4: 2283819, 6: 2284018, 9: 2284202, 26: 2284202, 39: 2284230, 51: 2284258, 69: 2284258, 70: 2284548, 82: 2284856, 39529
[2025-12-14 11:10:20] 2025-12-14 16:09:03,350 | INFO     | --------------------------------------------------
[2025-12-14 11:10:20] 2025-12-14 16:09:03,350 | INFO     | 
[2025-12-14 11:10:20] 2025-12-14 16:09:03,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-14 11:10:20] 2025-12-14 16:09:03,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,726 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 11:10:20] 2025-12-14 16:09:03,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 11:10:20] 2025-12-14 16:09:03,777 | INFO     | job 6929715956 has completed (purged errors)
[2025-12-14 11:10:20] 2025-12-14 16:09:03,777 | INFO     | overall cleanup function is called
[2025-12-14 11:10:20] 2025-12-14 16:09:04,917 | INFO     | --- collectZombieJob: --- 10, [4001507]
[2025-12-14 11:10:20] 2025-12-14 16:09:04,917 | INFO     | zombie collector waiting for pid 4001507
[2025-12-14 11:10:20] 2025-12-14 16:09:04,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 11:10:20] 2025-12-14 16:09:04,918 | INFO     | collected zombie processes
[2025-12-14 11:10:20] 2025-12-14 16:09:04,918 | INFO     | will attempt to kill all subprocesses of pid=4001507
[2025-12-14 11:10:20] 2025-12-14 16:09:06,371 | INFO     | PID=3954090 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 11:10:20] 2025-12-14 16:09:06,371 | INFO     | .. there are 55 such processes running
[2025-12-14 11:10:20] 2025-12-14 16:09:10,351 | INFO     | process IDs to be killed: [4001507] (in reverse order)
[2025-12-14 11:10:20] 2025-12-14 16:09:11,672 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 11:10:20] 2025-12-14 16:09:11,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 11:10:20] 2025-12-14 16:09:11,905 | INFO     | did not find any defunct processes belonging to 4001507
[2025-12-14 11:10:20] 2025-12-14 16:09:12,527 | INFO     | did not find any defunct processes belonging to 4001507
[2025-12-14 11:10:20] 2025-12-14 16:09:12,532 | INFO     | ready for new job
[2025-12-14 11:10:20] 2025-12-14 16:09:12,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 11:10:20] 2025-12-14 16:09:12,576 | INFO     | ***************************************
[2025-12-14 11:10:20] 2025-12-14 16:09:12,576 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 11:10:20] 2025-12-14 16:09:12,577 | INFO     | ***************************************
[2025-12-14 11:10:20] 2025-12-14 16:09:12,577 | INFO     | 
[2025-12-14 11:10:20] 2025-12-14 16:09:12,685 | INFO     | architecture information:
[2025-12-14 11:10:20] 2025-12-14 16:09:12,709 | INFO     | executing command: cat /etc/os-release
[2025-12-14 11:10:20] 2025-12-14 16:09:12,900 | INFO     | cat /etc/os-release:
[2025-12-14 11:10:20] NAME="CentOS Linux"
[2025-12-14 11:10:20] VERSION="7 (Core)"
[2025-12-14 11:10:20] ID="centos"
[2025-12-14 11:10:20] ID_LIKE="rhel fedora"
[2025-12-14 11:10:20] VERSION_ID="7"
[2025-12-14 11:10:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 11:10:20] ANSI_COLOR="0;31"
[2025-12-14 11:10:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 11:10:20] HOME_URL="https://www.centos.org/"
[2025-12-14 11:10:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 11:10:20] 
[2025-12-14 11:10:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 11:10:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 11:10:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 11:10:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 11:10:20] 
[2025-12-14 11:10:20] 2025-12-14 16:09:12,901 | INFO     | ***************************************
[2025-12-14 11:10:20] 2025-12-14 16:09:13,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-14 11:10:20] 2025-12-14 16:09:13,486 | INFO     | sufficient remaining disk space (92427780096 B)
[2025-12-14 11:10:20] 2025-12-14 16:09:13,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 11:10:20] 2025-12-14 16:09:13,488 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 11:10:20] 2025-12-14 16:09:13,488 | INFO     | update_server=False
[2025-12-14 11:10:20] 2025-12-14 16:09:13,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 11:10:20] 2025-12-14 16:09:13,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 11:10:20] 2025-12-14 16:09:13,490 | INFO     | aborting loop
[2025-12-14 11:10:20] 2025-12-14 16:09:13,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 11:10:20] 2025-12-14 16:09:14,094 | INFO     | all payload control threads have been joined
[2025-12-14 11:10:20] 2025-12-14 16:09:14,237 | INFO     | all data control threads have been joined
[2025-12-14 11:10:20] 2025-12-14 16:09:14,495 | INFO     | [job] retrieve thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:14,497 | INFO     | [job] job monitor thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:14,733 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:14,767 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:14,816 | INFO     | [payload] failed_post thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:14,932 | INFO     | [payload] validate_post thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:15,070 | INFO     | all job control threads have been joined
[2025-12-14 11:10:20] 2025-12-14 16:09:15,100 | INFO     | [payload] control thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:15,243 | INFO     | [data] control thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:15,794 | INFO     | [data] copytool_out thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:15,980 | INFO     | [data] copytool_in thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:16,016 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:16,026 | INFO     | [job] validate thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:16,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:16,084 | INFO     | [job] control thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:16,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 11:10:20] 2025-12-14 16:09:16,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 11:10:20] 2025-12-14 16:09:17,238 | INFO     | [job] queue monitor thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:20,460 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 11:10:20] 2025-12-14 16:09:44,738 | INFO     | PID=3954090 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-14 11:10:20] 2025-12-14 16:09:44,738 | INFO     | .. there are 55 such processes running
[2025-12-14 11:10:20] 2025-12-14 16:09:44,739 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 11:10:20] 2025-12-14 16:09:44,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 11:10:20] 2025-12-14 16:09:44,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 11:10:20] 2025-12-14 16:09:51,154 | INFO     | [monitor] cgroup control has ended
[2025-12-14 11:10:20] 2025-12-14 16:09:51,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369359935296)>', '<ExcThread(monitor, started 140368641251072)>']
[2025-12-14 11:10:20] 2025-12-14 16:09:52,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 11:10:20] 2025-12-14 16:09:52,829 | INFO     | [monitor] control thread has ended
[2025-12-14 11:10:20] 2025-12-14 16:09:56,856 | INFO     | all workflow threads have been joined
[2025-12-14 11:10:20] 2025-12-14 16:09:56,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 11:10:20] 2025-12-14 16:09:56,861 | INFO     | traces error code: 0
[2025-12-14 11:10:20] 2025-12-14 16:09:56,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 11:10:20] 2025-12-14 16:09:59,712 [wrapper] ==== pilot stdout END ====
[2025-12-14 11:10:20] 2025-12-14 16:09:59,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 11:10:20] 2025-12-14 16:09:59,797 [wrapper] pilotpid: 3954090
[2025-12-14 11:10:20] 2025-12-14 16:09:59,822 [wrapper] Pilot exit status: 0
[2025-12-14 11:10:20] 2025-12-14 16:10:00,007 [wrapper] pandaids: 6929715956
[2025-12-14 11:10:20] 2025-12-14 16:10:01,349 [wrapper] cleanup supervisor_pilot 1839420 3954091
[2025-12-14 11:10:20] 2025-12-14 16:10:01,399 [wrapper] Test setup, not cleaning
[2025-12-14 11:10:20] 2025-12-14 16:10:01,441 [wrapper] apfmon messages muted
[2025-12-14 11:10:20] 2025-12-14 16:10:01,490 [wrapper] ==== wrapper stdout END ====
[2025-12-14 11:10:20] 2025-12-14 16:10:01,557 [wrapper] ==== wrapper stderr END ====
[2025-12-14 11:10:20]  *** Error codes and diagnostics ***
[2025-12-14 11:10:20]     "exeErrorCode": 0,
[2025-12-14 11:10:20]     "exeErrorDiag": "",
[2025-12-14 11:10:20]     "pilotErrorCode": 0,
[2025-12-14 11:10:20]     "pilotErrorDiag": "",
[2025-12-14 11:10:20]  *** Listing of results directory ***
[2025-12-14 11:10:20] total 374400
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-14 11:10:20] -rwx------. 1 boincer umatlas     36322 Dec 13 16:22 runpilot2-wrapper.sh
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 16:25 queuedata.json
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 11:10:20] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:03 run_atlas
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:03 job.xml
[2025-12-14 11:10:20] -rw-r--r--. 2 boincer umatlas 195811573 Dec 14 00:03 EVNT.47899040._000049.pool.root.1
[2025-12-14 11:10:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:03 start_atlas.sh
[2025-12-14 11:10:20] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:03 shared
[2025-12-14 11:10:20] -rw-r--r--. 2 boincer umatlas    592388 Dec 14 00:03 input.tar.gz
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:03 boinc_lockfile
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas      2491 Dec 14 00:04 pandaJob.out
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas        57 Dec 14 00:04 setup.sh.local
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas    991728 Dec 14 00:06 agis_schedconf.cvmfs.json
[2025-12-14 11:10:20] drwx------. 5 boincer umatlas      4096 Dec 14 00:06 pilot3
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas 177037571 Dec 14 11:00 HITS.47899042._001713.pool.root.1
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas       532 Dec 14 11:01 boinc_task_state.xml
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas      6879 Dec 14 11:04 init_data.xml
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas      1040 Dec 14 11:07 memory_monitor_summary.json
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas   1516240 Dec 14 11:07 agis_ddmendpoints.agis.ALL.json
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas    627645 Dec 14 11:08 log.47899042._001713.job.log.tgz.1
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas      7831 Dec 14 11:09 heartbeat.json
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas        96 Dec 14 11:09 pilot_heartbeat.json
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas      4825 Dec 14 11:09 pilotlog.txt
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas   2677417 Dec 14 11:10 log.47899042._001713.job.log.1
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas       357 Dec 14 11:10 output.list
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas       620 Dec 14 11:10 runtime_log
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas   3328000 Dec 14 11:10 result.tar.gz
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas       662 Dec 14 11:10 vOcNDmsFmo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsIQKDmINraKm.diag
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas      9353 Dec 14 11:10 runtime_log.err
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 11:10 boinc_mmap_file
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas        29 Dec 14 11:10 wrapper_checkpoint.txt
[2025-12-14 11:10:20] -rw-r--r--. 1 boincer umatlas     21200 Dec 14 11:10 stderr.txt
[2025-12-14 11:10:20] HITS file was successfully produced:
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas 177037571 Dec 14 11:00 shared/HITS.pool.root.1
[2025-12-14 11:10:20]  *** Contents of shared directory: ***
[2025-12-14 11:10:20] total 367968
[2025-12-14 11:10:20] -rw-r--r--. 2 boincer umatlas 195811573 Dec 14 00:03 ATLAS.root_0
[2025-12-14 11:10:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:03 start_atlas.sh
[2025-12-14 11:10:20] -rw-r--r--. 2 boincer umatlas    592388 Dec 14 00:03 input.tar.gz
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas 177037571 Dec 14 11:00 HITS.pool.root.1
[2025-12-14 11:10:20] -rw-------. 1 boincer umatlas   3328000 Dec 14 11:10 result.tar.gz
11:10:22 (3933285): run_atlas exited; CPU time 108484.923794
11:10:22 (3933285): called boinc_finish(0)

</stderr_txt>
]]>

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