Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:03:27 (620657): wrapper (7.7.26015): starting
21:03:27 (620657): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 21:03:27] Arguments: --nthreads 12
[2025-12-13 21:03:27] Threads: 12
[2025-12-13 21:03:27] Checking for CVMFS
[2025-12-13 21:03:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 21:03:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 21:03:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 21:03:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 21:03:28] 2.11.5.0 4071029 18647 375456 153984 2 585 27943526 45568001 15068 130560 0 128699643 99.778 88279554 21087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 21:03:28] CVMFS is ok
[2025-12-13 21:03:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 21:03:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 21:03:28] Further information can be found at the LHC@home message board.
[2025-12-13 21:03:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 21:03:28] Checking for apptainer binary...
[2025-12-13 21:03:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 21:03:28] Running /usr/bin/apptainer --version
[2025-12-13 21:03:28] apptainer version 1.4.1-1.el9
[2025-12-13 21:03:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 21:03:28] wns0029.triumf.lcg
[2025-12-13 21:03:28] apptainer works
[2025-12-13 21:03:28] Set ATHENA_PROC_NUMBER=12
[2025-12-13 21:03:28] Set ATHENA_CORE_NUMBER=12
[2025-12-13 21:03:28] Starting ATLAS job with PandaID=6929716119
[2025-12-13 21:03:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:06:59]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | wrong length of table data, x=[1765688649.0], y=[1026.0] (must be same and length>=4)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | INFO     | could have reported an average CPU frequency of 2608 MHz (4 samples)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | ..............................
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . Timing measurements:
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . get job = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . initial setup = 2 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . payload setup = 6 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . stage-in = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . payload execution = 21 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . stage-out = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . log creation = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | ..............................
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929716119/pilotlog.txt
[2025-12-13 21:06:59] 2025-12-14 05:06:26,388 | INFO     | time since job start (167s) is within the limit (174528.0s)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,393 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 21:06:59] - Log from pilotlog.txt -
[2025-12-13 21:06:59] 2025-12-14 05:06:26,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | found no stored workdir sizes
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | wrong length of table data, x=[1765688649.0], y=[1026.0] (must be same and length>=4)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | INFO     | could have reported an average CPU frequency of 2608 MHz (4 samples)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | ..............................
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . Timing measurements:
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . get job = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . initial setup = 2 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . payload setup = 6 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . stage-in = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . payload execution = 21 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . stage-out = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . log creation = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | ..............................
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929716119/pilotlog.txt
[2025-12-13 21:06:59] 2025-12-14 05:06:26,388 | INFO     | time since job start (167s) is within the limit (174528.0s)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,393 | WARNING  | 
[2025-12-13 21:06:59] [begin log extracts]
[2025-12-13 21:06:59] - Log from pilotlog.txt -
[2025-12-13 21:06:59] 2025-12-14 05:06:26,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | found no stored workdir sizes
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | WARNING  | wrong length of table data, x=[1765688649.0], y=[1026.0] (must be same and length>=4)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,377 | INFO     | could have reported an average CPU frequency of 2608 MHz (4 samples)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | ..............................
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . Timing measurements:
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . get job = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . initial setup = 2 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . payload setup = 6 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . stage-in = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . payload execution = 21 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . stage-out = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | . log creation = 0 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | ..............................
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 21:06:59] 2025-12-14 05:06:26,378 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929716119/pilotlog.txt
[2025-12-13 21:06:59] 2025-12-14 05:06:26,388 | INFO     | time since job start (167s) is within the limit (174528.0s)
[2025-12-13 21:06:59] [end log extracts]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,394 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,394 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 21:06:59] 2025-12-14 05:06:26,708 | INFO     | 
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | job summary report
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | --------------------------------------------------
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | PanDA job id: 6929716119
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | task id: 47899042
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 21:04:19,359 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | pilot state: failed 
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | transexitcode: 65
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | exeerrorcode: 65
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | exitcode: 65
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | cpuconsumptiontime: 17 s
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | nevents: 0
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | neventsw: 0
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | pid: 630890
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | pgrp: 630890
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | corecount: 12
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | event service: False
[2025-12-13 21:06:59] 2025-12-14 05:06:26,709 | INFO     | sizes: {0: 2283925, 6: 2284187, 11: 2284215, 31: 2307370, 32: 2311690, 151: 2311828}
[2025-12-13 21:06:59] 2025-12-14 05:06:26,710 | INFO     | --------------------------------------------------
[2025-12-13 21:06:59] 2025-12-14 05:06:26,710 | INFO     | 
[2025-12-13 21:06:59] 2025-12-14 05:06:26,710 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 21:06:59] 2025-12-14 05:06:26,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | job 6929716119 has completed (purged errors)
[2025-12-13 21:06:59] 2025-12-14 05:06:26,725 | INFO     | overall cleanup function is called
[2025-12-13 21:06:59] 2025-12-14 05:06:27,733 | INFO     | --- collectZombieJob: --- 10, [630890]
[2025-12-13 21:06:59] 2025-12-14 05:06:27,733 | INFO     | zombie collector waiting for pid 630890
[2025-12-13 21:06:59] 2025-12-14 05:06:27,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:06:59] 2025-12-14 05:06:27,733 | INFO     | collected zombie processes
[2025-12-13 21:06:59] 2025-12-14 05:06:27,734 | INFO     | will attempt to kill all subprocesses of pid=630890
[2025-12-13 21:06:59] 2025-12-14 05:06:27,913 | INFO     | process IDs to be killed: [630890] (in reverse order)
[2025-12-13 21:06:59] 2025-12-14 05:06:27,978 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:06:59] 2025-12-14 05:06:27,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:06:59] 2025-12-14 05:06:27,985 | INFO     | did not find any defunct processes belonging to 630890
[2025-12-13 21:06:59] 2025-12-14 05:06:27,992 | INFO     | did not find any defunct processes belonging to 630890
[2025-12-13 21:06:59] 2025-12-14 05:06:27,992 | INFO     | ready for new job
[2025-12-13 21:06:59] 2025-12-14 05:06:27,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:06:59] 2025-12-14 05:06:27,994 | INFO     | ***************************************
[2025-12-13 21:06:59] 2025-12-14 05:06:27,994 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:06:59] 2025-12-14 05:06:27,994 | INFO     | ***************************************
[2025-12-13 21:06:59] 2025-12-14 05:06:27,994 | INFO     | 
[2025-12-13 21:06:59] 2025-12-14 05:06:27,996 | INFO     | architecture information:
[2025-12-13 21:06:59] 2025-12-14 05:06:27,996 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:06:59] 2025-12-14 05:06:28,007 | INFO     | cat /etc/os-release:
[2025-12-13 21:06:59] NAME="CentOS Linux"
[2025-12-13 21:06:59] VERSION="7 (Core)"
[2025-12-13 21:06:59] ID="centos"
[2025-12-13 21:06:59] ID_LIKE="rhel fedora"
[2025-12-13 21:06:59] VERSION_ID="7"
[2025-12-13 21:06:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:06:59] ANSI_COLOR="0;31"
[2025-12-13 21:06:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:06:59] HOME_URL="https://www.centos.org/"
[2025-12-13 21:06:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:06:59] 
[2025-12-13 21:06:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:06:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:06:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:06:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:06:59] 
[2025-12-13 21:06:59] 2025-12-14 05:06:28,007 | INFO     | ***************************************
[2025-12-13 21:06:59] 2025-12-14 05:06:28,509 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 21:06:59] 2025-12-14 05:06:28,521 | INFO     | sufficient remaining disk space (2075387756544 B)
[2025-12-13 21:06:59] 2025-12-14 05:06:28,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:06:59] 2025-12-14 05:06:28,522 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:06:59] 2025-12-14 05:06:28,522 | INFO     | update_server=False
[2025-12-13 21:06:59] 2025-12-14 05:06:28,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:06:59] 2025-12-14 05:06:28,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:06:59] 2025-12-14 05:06:28,522 | INFO     | aborting loop
[2025-12-13 21:06:59] 2025-12-14 05:06:28,949 | INFO     | all data control threads have been joined
[2025-12-13 21:06:59] 2025-12-14 05:06:28,957 | INFO     | all payload control threads have been joined
[2025-12-13 21:06:59] 2025-12-14 05:06:29,104 | INFO     | all job control threads have been joined
[2025-12-13 21:06:59] 2025-12-14 05:06:29,526 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:29,527 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:29,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:06:59] 2025-12-14 05:06:29,954 | INFO     | [data] control thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:29,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:06:59] 2025-12-14 05:06:29,962 | INFO     | [payload] control thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,110 | INFO     | [job] control thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,321 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,631 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,687 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,698 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,813 | INFO     | [job] validate thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:30,989 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:31,011 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:31,026 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:31,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:06:59] 2025-12-14 05:06:31,936 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:32,479 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:33,971 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:06:59] 2025-12-14 05:06:39,394 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:06:59] 2025-12-14 05:06:40,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109531100992)>', '<ExcThread(monitor, started 140108997056256)>']
[2025-12-13 21:06:59] 2025-12-14 05:06:45,315 | INFO     | all workflow threads have been joined
[2025-12-13 21:06:59] 2025-12-14 05:06:45,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:06:59] 2025-12-14 05:06:45,316 | INFO     | traces error code: 0
[2025-12-13 21:06:59] 2025-12-14 05:06:45,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:06:59] 2025-12-14 05:06:59,676 | INFO     | PID=624316 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 21:06:59] 2025-12-14 05:06:59,676 | INFO     | .. there are 27 such processes running
[2025-12-13 21:06:59] 2025-12-14 05:06:59,677 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:06:59] 2025-12-14 05:06:59,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:06:59] 2025-12-14 05:06:59,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:06:59] 2025-12-14 05:06:59,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:06:59] 2025-12-14 05:06:59,677 | CRITICAL | thread 'MainThread' is not alive
[2025-12-13 21:06:59] 2025-12-14 05:06:59,677 | INFO     | [monitor] control thread has ended
[2025-12-13 21:06:59] 2025-12-14 05:06:59,798 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:06:59] 2025-12-14 05:06:59,802 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:06:59] 2025-12-14 05:06:59,804 [wrapper] pilotpid: 624316
[2025-12-13 21:06:59] 2025-12-14 05:06:59,806 [wrapper] Pilot exit status: 0
[2025-12-13 21:06:59] 2025-12-14 05:06:59,813 [wrapper] pandaids: 6929716119
[2025-12-13 21:06:59] 2025-12-14 05:06:59,856 [wrapper] cleanup supervisor_pilot  624322 624317
[2025-12-13 21:06:59] 2025-12-14 05:06:59,858 [wrapper] Test setup, not cleaning
[2025-12-13 21:06:59] 2025-12-14 05:06:59,860 [wrapper] apfmon messages muted
[2025-12-13 21:06:59] 2025-12-14 05:06:59,862 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:06:59] 2025-12-14 05:06:59,863 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:06:59]  *** Error codes and diagnostics ***
[2025-12-13 21:06:59]     "exeErrorCode": 65,
[2025-12-13 21:06:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 21:06:59]     "pilotErrorCode": 1305,
[2025-12-13 21:06:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 21:06:59]  *** Listing of results directory ***
[2025-12-13 21:06:59] total 195800
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc    579449 Dec 13 13:19 pilot3.tar.gz
[2025-12-13 21:06:59] -rwx------. 1 boinc boinc     36322 Dec 13 13:20 runpilot2-wrapper.sh
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc      5112 Dec 13 13:21 queuedata.json
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc       100 Dec 13 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:06:59] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 21:03 run_atlas
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc       105 Dec 13 21:03 job.xml
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc      6595 Dec 13 21:03 init_data.xml
[2025-12-13 21:06:59] -rw-r--r--. 2 boinc boinc 196384594 Dec 13 21:03 EVNT.47899040._000096.pool.root.1
[2025-12-13 21:06:59] -rw-r--r--. 2 boinc boinc     15847 Dec 13 21:03 start_atlas.sh
[2025-12-13 21:06:59] drwxrwx--x. 2 boinc boinc      4096 Dec 13 21:03 shared
[2025-12-13 21:06:59] -rw-r--r--. 2 boinc boinc    592385 Dec 13 21:03 input.tar.gz
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc         0 Dec 13 21:03 boinc_lockfile
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc      2488 Dec 13 21:03 pandaJob.out
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc    991728 Dec 13 21:03 agis_schedconf.cvmfs.json
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc   1516240 Dec 13 21:03 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:06:59] drwx------. 5 boinc boinc      4096 Dec 13 21:03 pilot3
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc       522 Dec 13 21:04 boinc_task_state.xml
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc       954 Dec 13 21:04 memory_monitor_summary.json
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc     20280 Dec 13 21:04 log.47899042._001876.job.log.tgz.1
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc      8380 Dec 13 21:06 heartbeat.json
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc      8192 Dec 13 21:06 boinc_mmap_file
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc        22 Dec 13 21:06 wrapper_checkpoint.txt
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc        95 Dec 13 21:06 pilot_heartbeat.json
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc       892 Dec 13 21:06 pilotlog.txt
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc     82338 Dec 13 21:06 log.47899042._001876.job.log.1
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc       188 Dec 13 21:06 output.list
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc       620 Dec 13 21:06 runtime_log
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc    122880 Dec 13 21:06 result.tar.gz
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc      8636 Dec 13 21:06 runtime_log.err
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc       644 Dec 13 21:06 Ae0LDmTDmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpNUKDmQbm56m.diag
[2025-12-13 21:06:59] -rw-r--r--. 1 boinc boinc     21655 Dec 13 21:06 stderr.txt
[2025-12-13 21:06:59] No HITS result produced
[2025-12-13 21:06:59]  *** Contents of shared directory: ***
[2025-12-13 21:06:59] total 192500
[2025-12-13 21:06:59] -rw-r--r--. 2 boinc boinc 196384594 Dec 13 21:03 ATLAS.root_0
[2025-12-13 21:06:59] -rw-r--r--. 2 boinc boinc     15847 Dec 13 21:03 start_atlas.sh
[2025-12-13 21:06:59] -rw-r--r--. 2 boinc boinc    592385 Dec 13 21:03 input.tar.gz
[2025-12-13 21:06:59] -rw-------. 1 boinc boinc    122880 Dec 13 21:06 result.tar.gz
21:07:00 (620657): run_atlas exited; CPU time 21.860401
21:07:00 (620657): called boinc_finish(0)

</stderr_txt>
]]>

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