Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:30 (1862300): wrapper (7.7.26015): starting
20:48:30 (1862300): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 20:48:30] Arguments: --nthreads 12
[2025-12-13 20:48:30] Threads: 12
[2025-12-13 20:48:30] Checking for CVMFS
[2025-12-13 20:48:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:48:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:48:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:48:32] 2.11.5.0 3627452 53535 296968 153984 1 629 43961763 45568000 21977 130560 0 426755976 99.786 274461316 22663 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-13 20:48:32] CVMFS is ok
[2025-12-13 20:48:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:48:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:48:32] Further information can be found at the LHC@home message board.
[2025-12-13 20:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:48:32] Checking for apptainer binary...
[2025-12-13 20:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:48:32] Running /usr/bin/apptainer --version
[2025-12-13 20:48:32] apptainer version 1.4.1-1.el9
[2025-12-13 20:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:48:32] wns0050.triumf.lcg
[2025-12-13 20:48:32] apptainer works
[2025-12-13 20:48:32] Set ATHENA_PROC_NUMBER=12
[2025-12-13 20:48:32] Set ATHENA_CORE_NUMBER=12
[2025-12-13 20:48:32] Starting ATLAS job with PandaID=6929719097
[2025-12-13 20:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 20:53:05]  *** The last 200 lines of the pilot log: ***
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | WARNING  | wrong length of table data, x=[1765687791.0], y=[24418.0] (must be same and length>=4)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | could have reported an average CPU frequency of 2582 MHz (4 samples)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | ..............................
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . Timing measurements:
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . get job = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . initial setup = 2 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . payload setup = 15 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . stage-in = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . payload execution = 33 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . stage-out = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . log creation = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | ..............................
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929719097/pilotlog.txt
[2025-12-13 20:53:05] 2025-12-14 04:52:32,183 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 20:53:05] - Log from pilotlog.txt -
[2025-12-13 20:53:05] 2025-12-14 04:52:32,162 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929719097/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | INFO     | extracted standard info from prmon json
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | WARNING  | wrong length of table data, x=[1765687791.0], y=[24418.0] (must be same and length>=4)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | could have reported an average CPU frequency of 2582 MHz (4 samples)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | ..............................
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . Timing measurements:
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . get job = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . initial setup = 2 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . payload setup = 15 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . stage-in = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . payload execution = 33 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . stage-out = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . log creation = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | ..............................
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929719097/pilotlog.txt
[2025-12-13 20:53:05] 2025-12-14 04:52:32,183 | WARNING  | 
[2025-12-13 20:53:05] [begin log extracts]
[2025-12-13 20:53:05] - Log from pilotlog.txt -
[2025-12-13 20:53:05] 2025-12-14 04:52:32,162 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929719097/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | INFO     | extracted standard info from prmon json
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:53:05] 2025-12-14 04:52:32,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | WARNING  | wrong length of table data, x=[1765687791.0], y=[24418.0] (must be same and length>=4)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | could have reported an average CPU frequency of 2582 MHz (4 samples)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | ..............................
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . Timing measurements:
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . get job = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . initial setup = 2 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . payload setup = 15 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . stage-in = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . payload execution = 33 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . stage-out = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | . log creation = 0 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | ..............................
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 20:53:05] 2025-12-14 04:52:32,164 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929719097/pilotlog.txt
[2025-12-13 20:53:05] [end log extracts]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,184 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,184 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | 
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | job summary report
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | --------------------------------------------------
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | PanDA job id: 6929719097
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | task id: 47899042
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 20:50:07,534 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 20:53:05] 2025-12-14 04:52:32,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | pilot state: failed 
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | transexitcode: 65
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | exeerrorcode: 65
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | exitcode: 65
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | cpuconsumptiontime: 16 s
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | nevents: 0
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | neventsw: 0
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | pid: 1872796
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | pgrp: 1872796
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | corecount: 12
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | event service: False
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | sizes: {0: 2283105, 1: 2283958, 11: 2284220, 12: 2284248, 53: 2307578, 54: 2311870, 55: 2312026, 189: 2312252}
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | --------------------------------------------------
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | 
[2025-12-13 20:53:05] 2025-12-14 04:52:32,239 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 20:53:05] 2025-12-14 04:52:32,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 20:53:05] 2025-12-14 04:52:32,254 | INFO     | job 6929719097 has completed (purged errors)
[2025-12-13 20:53:05] 2025-12-14 04:52:32,254 | INFO     | overall cleanup function is called
[2025-12-13 20:53:05] 2025-12-14 04:52:33,261 | INFO     | --- collectZombieJob: --- 10, [1872796]
[2025-12-13 20:53:05] 2025-12-14 04:52:33,261 | INFO     | zombie collector waiting for pid 1872796
[2025-12-13 20:53:05] 2025-12-14 04:52:33,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 20:53:05] 2025-12-14 04:52:33,261 | INFO     | collected zombie processes
[2025-12-13 20:53:05] 2025-12-14 04:52:33,261 | INFO     | will attempt to kill all subprocesses of pid=1872796
[2025-12-13 20:53:05] 2025-12-14 04:52:34,227 | INFO     | process IDs to be killed: [1872796] (in reverse order)
[2025-12-13 20:53:05] 2025-12-14 04:52:34,309 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 20:53:05] 2025-12-14 04:52:34,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 20:53:05] 2025-12-14 04:52:34,344 | INFO     | did not find any defunct processes belonging to 1872796
[2025-12-13 20:53:05] 2025-12-14 04:52:34,357 | INFO     | did not find any defunct processes belonging to 1872796
[2025-12-13 20:53:05] 2025-12-14 04:52:34,358 | INFO     | ready for new job
[2025-12-13 20:53:05] 2025-12-14 04:52:34,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 20:53:05] 2025-12-14 04:52:34,359 | INFO     | ***************************************
[2025-12-13 20:53:05] 2025-12-14 04:52:34,359 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 20:53:05] 2025-12-14 04:52:34,359 | INFO     | ***************************************
[2025-12-13 20:53:05] 2025-12-14 04:52:34,360 | INFO     | 
[2025-12-13 20:53:05] 2025-12-14 04:52:34,361 | INFO     | architecture information:
[2025-12-13 20:53:05] 2025-12-14 04:52:34,367 | INFO     | executing command: cat /etc/os-release
[2025-12-13 20:53:05] 2025-12-14 04:52:34,411 | INFO     | cat /etc/os-release:
[2025-12-13 20:53:05] NAME="CentOS Linux"
[2025-12-13 20:53:05] VERSION="7 (Core)"
[2025-12-13 20:53:05] ID="centos"
[2025-12-13 20:53:05] ID_LIKE="rhel fedora"
[2025-12-13 20:53:05] VERSION_ID="7"
[2025-12-13 20:53:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 20:53:05] ANSI_COLOR="0;31"
[2025-12-13 20:53:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 20:53:05] HOME_URL="https://www.centos.org/"
[2025-12-13 20:53:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 20:53:05] 
[2025-12-13 20:53:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 20:53:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 20:53:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 20:53:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 20:53:05] 
[2025-12-13 20:53:05] 2025-12-14 04:52:34,411 | INFO     | ***************************************
[2025-12-13 20:53:05] 2025-12-14 04:52:34,915 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 20:53:05] 2025-12-14 04:52:34,966 | INFO     | sufficient remaining disk space (2120223817728 B)
[2025-12-13 20:53:05] 2025-12-14 04:52:34,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 20:53:05] 2025-12-14 04:52:34,966 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 20:53:05] 2025-12-14 04:52:34,966 | INFO     | update_server=False
[2025-12-13 20:53:05] 2025-12-14 04:52:34,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 20:53:05] 2025-12-14 04:52:34,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 20:53:05] 2025-12-14 04:52:35,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:53:05] 2025-12-14 04:52:35,056 | INFO     | aborting loop
[2025-12-13 20:53:05] 2025-12-14 04:52:35,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 20:53:05] 2025-12-14 04:52:35,278 | INFO     | all data control threads have been joined
[2025-12-13 20:53:05] 2025-12-14 04:52:35,973 | INFO     | [job] retrieve thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,049 | INFO     | all payload control threads have been joined
[2025-12-13 20:53:05] 2025-12-14 04:52:36,062 | INFO     | [job] job monitor thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,080 | INFO     | all job control threads have been joined
[2025-12-13 20:53:05] 2025-12-14 04:52:36,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,284 | INFO     | [data] control thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,430 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,833 | INFO     | [payload] validate_post thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,884 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:36,981 | INFO     | [data] copytool_in thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:37,055 | INFO     | [payload] control thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:37,086 | INFO     | [job] control thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:37,169 | INFO     | [job] validate thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:37,216 | INFO     | [data] copytool_out thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:37,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:53:05] 2025-12-14 04:52:37,355 | INFO     | [payload] failed_post thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:37,454 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:38,260 | INFO     | [job] queue monitor thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:38,977 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 20:53:05] 2025-12-14 04:52:54,072 | INFO     | [monitor] cgroup control has ended
[2025-12-13 20:53:05] 2025-12-14 04:52:55,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777790293824)>', '<ExcThread(monitor, started 139777395373824)>']
[2025-12-13 20:53:05] 2025-12-14 04:53:00,110 | INFO     | all workflow threads have been joined
[2025-12-13 20:53:05] 2025-12-14 04:53:00,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 20:53:05] 2025-12-14 04:53:00,110 | INFO     | traces error code: 0
[2025-12-13 20:53:05] 2025-12-14 04:53:00,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 20:53:05] 2025-12-14 04:53:04,786 | INFO     | PID=1866068 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 20:53:05] 2025-12-14 04:53:04,786 | INFO     | .. there are 42 such processes running
[2025-12-13 20:53:05] 2025-12-14 04:53:04,787 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 20:53:05] 2025-12-14 04:53:04,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 20:53:05] 2025-12-14 04:53:04,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 20:53:05] 2025-12-14 04:53:04,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 20:53:05] 2025-12-14 04:53:04,787 | INFO     | [monitor] control thread has ended
[2025-12-13 20:53:05] 2025-12-14 04:53:05,196 [wrapper] ==== pilot stdout END ====
[2025-12-13 20:53:05] 2025-12-14 04:53:05,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 20:53:05] 2025-12-14 04:53:05,249 [wrapper] pilotpid: 1866068
[2025-12-13 20:53:05] 2025-12-14 04:53:05,252 [wrapper] Pilot exit status: 0
[2025-12-13 20:53:05] 2025-12-14 04:53:05,266 [wrapper] pandaids: 6929719097
[2025-12-13 20:53:05] 2025-12-14 04:53:05,315 [wrapper] cleanup supervisor_pilot 1866074 1866069
[2025-12-13 20:53:05] 2025-12-14 04:53:05,316 [wrapper] Test setup, not cleaning
[2025-12-13 20:53:05] 2025-12-14 04:53:05,318 [wrapper] apfmon messages muted
[2025-12-13 20:53:05] 2025-12-14 04:53:05,320 [wrapper] ==== wrapper stdout END ====
[2025-12-13 20:53:05] 2025-12-14 04:53:05,321 [wrapper] ==== wrapper stderr END ====
[2025-12-13 20:53:05]  *** Error codes and diagnostics ***
[2025-12-13 20:53:05]     "exeErrorCode": 65,
[2025-12-13 20:53:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 20:53:05]     "pilotErrorCode": 1305,
[2025-12-13 20:53:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 20:53:05]  *** Listing of results directory ***
[2025-12-13 20:53:05] total 199448
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc    579449 Dec 13 13:19 pilot3.tar.gz
[2025-12-13 20:53:05] -rwx------. 1 boinc boinc     36322 Dec 13 13:19 runpilot2-wrapper.sh
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc      5112 Dec 13 13:21 queuedata.json
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc       100 Dec 13 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 20:53:05] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 20:48 run_atlas
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc       105 Dec 13 20:48 job.xml
[2025-12-13 20:53:05] -rw-r--r--. 2 boinc boinc    592384 Dec 13 20:48 input.tar.gz
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc      6595 Dec 13 20:48 init_data.xml
[2025-12-13 20:53:05] -rw-r--r--. 2 boinc boinc 200099965 Dec 13 20:48 EVNT.47899040._000103.pool.root.1
[2025-12-13 20:53:05] -rw-r--r--. 2 boinc boinc     15847 Dec 13 20:48 start_atlas.sh
[2025-12-13 20:53:05] drwxrwx--x. 2 boinc boinc      4096 Dec 13 20:48 shared
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc         0 Dec 13 20:48 boinc_lockfile
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc      2491 Dec 13 20:48 pandaJob.out
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc    991728 Dec 13 20:48 agis_schedconf.cvmfs.json
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc   1516240 Dec 13 20:48 agis_ddmendpoints.agis.ALL.json
[2025-12-13 20:53:05] drwx------. 5 boinc boinc      4096 Dec 13 20:48 pilot3
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc       979 Dec 13 20:50 memory_monitor_summary.json
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc     21173 Dec 13 20:50 log.47899042._002053.job.log.tgz.1
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc      8414 Dec 13 20:52 heartbeat.json
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc       524 Dec 13 20:52 boinc_task_state.xml
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc        22 Dec 13 20:53 wrapper_checkpoint.txt
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc        95 Dec 13 20:53 pilot_heartbeat.json
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc       823 Dec 13 20:53 pilotlog.txt
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc      8192 Dec 13 20:53 boinc_mmap_file
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc     89828 Dec 13 20:53 log.47899042._002053.job.log.1
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc       188 Dec 13 20:53 output.list
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc       620 Dec 13 20:53 runtime_log
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc    133120 Dec 13 20:53 result.tar.gz
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc      8636 Dec 13 20:53 runtime_log.err
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc       644 Dec 13 20:53 qJQKDm0Cmo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5CQKDmW6ENGo.diag
[2025-12-13 20:53:05] -rw-r--r--. 1 boinc boinc     21796 Dec 13 20:53 stderr.txt
[2025-12-13 20:53:05] No HITS result produced
[2025-12-13 20:53:05]  *** Contents of shared directory: ***
[2025-12-13 20:53:05] total 196140
[2025-12-13 20:53:05] -rw-r--r--. 2 boinc boinc    592384 Dec 13 20:48 input.tar.gz
[2025-12-13 20:53:05] -rw-r--r--. 2 boinc boinc 200099965 Dec 13 20:48 ATLAS.root_0
[2025-12-13 20:53:05] -rw-r--r--. 2 boinc boinc     15847 Dec 13 20:48 start_atlas.sh
[2025-12-13 20:53:05] -rw-------. 1 boinc boinc    133120 Dec 13 20:53 result.tar.gz
20:53:07 (1862300): run_atlas exited; CPU time 25.335415
20:53:07 (1862300): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN