Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:38 (2973244): wrapper (7.7.26015): starting
00:02:38 (2973244): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 00:02:38] Arguments: --nthreads 12
[2025-12-14 00:02:38] Threads: 12
[2025-12-14 00:02:38] Checking for CVMFS
[2025-12-14 00:02:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:02:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:02:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:02:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:02:41] 2.13.2.0 6383 59823 250564 153984 2 189 35222222 40960000 10843 16776704 0 74832922 99.733 47488755 37072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-14 00:02:41] CVMFS is ok
[2025-12-14 00:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:02:41] Further information can be found at the LHC@home message board.
[2025-12-14 00:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:02:41] Checking for apptainer binary...
[2025-12-14 00:02:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:02:41] Running /usr/bin/apptainer --version
[2025-12-14 00:02:41] apptainer version 1.4.4-1.el9
[2025-12-14 00:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:02:41] c-210-37-2.aglt2.org
[2025-12-14 00:02:41] apptainer works
[2025-12-14 00:02:41] Set ATHENA_PROC_NUMBER=12
[2025-12-14 00:02:41] Set ATHENA_CORE_NUMBER=12
[2025-12-14 00:02:42] Starting ATLAS job with PandaID=6929716087
[2025-12-14 00:02:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 02:51:19]  *** The last 200 lines of the pilot log: ***
[2025-12-14 02:51:20] 2025-12-14 07:50:17,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 02:51:20] 2025-12-14 07:50:17,584 | INFO     | time since job start (9981s) is within the limit (174528.0s)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,215 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 02:51:20] 2025-12-14 07:50:18,219 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3089.951607142856
[2025-12-14 02:51:20] 2025-12-14 07:50:18,232 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6929716087/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,233 | INFO     | extracted standard info from prmon json
[2025-12-14 02:51:20] 2025-12-14 07:50:18,233 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 02:51:20] 2025-12-14 07:50:18,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 02:51:20] 2025-12-14 07:50:18,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 02:51:20] 2025-12-14 07:50:18,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 02:51:20] 2025-12-14 07:50:18,236 | INFO     | fitting pss+swap vs Time
[2025-12-14 02:51:20] 2025-12-14 07:50:18,236 | INFO     | sum of square deviations: 1294273490.1739073
[2025-12-14 02:51:20] 2025-12-14 07:50:18,237 | INFO     | sum of deviations: 73324153411.17395
[2025-12-14 02:51:20] 2025-12-14 07:50:18,237 | INFO     | mean x: 1765693682.4782608
[2025-12-14 02:51:20] 2025-12-14 07:50:18,237 | INFO     | mean y: 2571479.9068322983
[2025-12-14 02:51:20] 2025-12-14 07:50:18,237 | INFO     | intersect: -100028832573.48259
[2025-12-14 02:51:20] 2025-12-14 07:50:18,238 | INFO     | chi2: 4.639621059379132
[2025-12-14 02:51:20] 2025-12-14 07:50:18,238 | INFO     | sum of square deviations: 1177458850.9935925
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | sum of deviations: 81610296202.1347
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | mean x: 1765693530.0064104
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | mean y: 2581935.8653846155
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | intersect: -122378571226.65828
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | chi2: 3.9323792615906505
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | current chi2=3.9323792615906505 (change=15.243525036571057 %)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,239 | INFO     | right removable region: 155
[2025-12-14 02:51:20] 2025-12-14 07:50:18,240 | INFO     | sum of square deviations: 1177352584.942304
[2025-12-14 02:51:20] 2025-12-14 07:50:18,240 | INFO     | sum of deviations: 25259249291.42305
[2025-12-14 02:51:20] 2025-12-14 07:50:18,240 | INFO     | mean x: 1765693835.0192308
[2025-12-14 02:51:20] 2025-12-14 07:50:18,240 | INFO     | mean y: 2634004.5256410255
[2025-12-14 02:51:20] 2025-12-14 07:50:18,241 | INFO     | intersect: -37879051840.04672
[2025-12-14 02:51:20] 2025-12-14 07:50:18,241 | INFO     | chi2: 1.5072237749548383
[2025-12-14 02:51:20] 2025-12-14 07:50:18,241 | INFO     | current chi2=1.5072237749548383 (change=67.51407591988702 %)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,241 | INFO     | sum of square deviations: 1067734719.6158923
[2025-12-14 02:51:20] 2025-12-14 07:50:18,242 | INFO     | sum of deviations: 6190800077.238407
[2025-12-14 02:51:20] 2025-12-14 07:50:18,242 | INFO     | mean x: 1765693987.5298014
[2025-12-14 02:51:20] 2025-12-14 07:50:18,242 | INFO     | mean y: 2660317.9470198676
[2025-12-14 02:51:20] 2025-12-14 07:50:18,242 | INFO     | intersect: -10234956080.170326
[2025-12-14 02:51:20] 2025-12-14 07:50:18,242 | INFO     | chi2: 0.9700723758644084
[2025-12-14 02:51:20] 2025-12-14 07:50:18,242 | INFO     | current chi2=0.9700723758644084 (change=35.63846377798312 %)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,243 | INFO     | sum of square deviations: 965095042.1712364
[2025-12-14 02:51:20] 2025-12-14 07:50:18,243 | INFO     | sum of deviations: -4169997131.924655
[2025-12-14 02:51:20] 2025-12-14 07:50:18,243 | INFO     | mean x: 1765694140.0753424
[2025-12-14 02:51:20] 2025-12-14 07:50:18,243 | INFO     | mean y: 2675712.993150685
[2025-12-14 02:51:20] 2025-12-14 07:50:18,243 | INFO     | intersect: 7631913433.876546
[2025-12-14 02:51:20] 2025-12-14 07:50:18,244 | INFO     | chi2: 0.8340468093063089
[2025-12-14 02:51:20] 2025-12-14 07:50:18,244 | INFO     | current chi2=0.8340468093063089 (change=14.022208027199037 %)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,244 | INFO     | left removable region: 30
[2025-12-14 02:51:20] 2025-12-14 07:50:18,244 | INFO     | sum of square deviations: 605605750.7519985
[2025-12-14 02:51:20] 2025-12-14 07:50:18,245 | INFO     | sum of deviations: -2557275057.543998
[2025-12-14 02:51:20] 2025-12-14 07:50:18,245 | INFO     | mean x: 1765694414.728
[2025-12-14 02:51:20] 2025-12-14 07:50:18,245 | INFO     | mean y: 2705185.984
[2025-12-14 02:51:20] 2025-12-14 07:50:18,245 | INFO     | intersect: 7458655332.464277
[2025-12-14 02:51:20] 2025-12-14 07:50:18,245 | INFO     | chi2: 0.006463326911818354
[2025-12-14 02:51:20] 2025-12-14 07:50:18,245 | INFO     | current memory leak: -4.22 B/s (using 125 data points, chi2=0.01)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | could have reported an average CPU frequency of 2931 MHz (9 samples)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | ..............................
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . Timing measurements:
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . get job = 0 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . initial setup = 8 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . payload setup = 51 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . stage-in = 1 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . payload execution = 9832 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . stage-out = 2 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | . log creation = 0 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,246 | INFO     | ..............................
[2025-12-14 02:51:20] 2025-12-14 07:50:18,434 | INFO     | 
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | job summary report
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | --------------------------------------------------
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | PanDA job id: 6929716087
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | task id: 47899042
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | errors: (none)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | pilot state: finished 
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | transexitcode: 0
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | exeerrorcode: 0
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | exeerrordiag: 
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | exitcode: 0
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | exitmsg: OK
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | cpuconsumptiontime: 37552 s
[2025-12-14 02:51:20] 2025-12-14 07:50:18,435 | INFO     | nevents: 400
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | neventsw: 0
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | pid: 2989078
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | pgrp: 2989078
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | corecount: 12
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | event service: False
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | sizes: {0: 2283106, 1: 2283791, 2: 2283819, 3: 2283990, 4: 2284018, 15: 2284046, 26: 2284202, 36: 2284492, 38: 2284520, 9888: 2313071, 9891: 2322069, 9892: 2322405
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | --------------------------------------------------
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | 
[2025-12-14 02:51:20] 2025-12-14 07:50:18,436 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-14 02:51:20] 2025-12-14 07:50:18,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | job 6929716087 has completed (purged errors)
[2025-12-14 02:51:20] 2025-12-14 07:50:18,543 | INFO     | overall cleanup function is called
[2025-12-14 02:51:20] 2025-12-14 07:50:19,565 | INFO     | --- collectZombieJob: --- 10, [2989078]
[2025-12-14 02:51:20] 2025-12-14 07:50:19,565 | INFO     | zombie collector waiting for pid 2989078
[2025-12-14 02:51:20] 2025-12-14 07:50:19,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 02:51:20] 2025-12-14 07:50:19,565 | INFO     | collected zombie processes
[2025-12-14 02:51:20] 2025-12-14 07:50:19,566 | INFO     | will attempt to kill all subprocesses of pid=2989078
[2025-12-14 02:51:20] 2025-12-14 07:50:21,089 | INFO     | process IDs to be killed: [2989078] (in reverse order)
[2025-12-14 02:51:20] 2025-12-14 07:50:21,223 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 02:51:20] 2025-12-14 07:50:21,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 02:51:20] 2025-12-14 07:50:21,234 | INFO     | did not find any defunct processes belonging to 2989078
[2025-12-14 02:51:20] 2025-12-14 07:50:21,243 | INFO     | did not find any defunct processes belonging to 2989078
[2025-12-14 02:51:20] 2025-12-14 07:50:21,243 | INFO     | ready for new job
[2025-12-14 02:51:20] 2025-12-14 07:50:21,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 02:51:20] 2025-12-14 07:50:21,245 | INFO     | ***************************************
[2025-12-14 02:51:20] 2025-12-14 07:50:21,246 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 02:51:20] 2025-12-14 07:50:21,247 | INFO     | ***************************************
[2025-12-14 02:51:20] 2025-12-14 07:50:21,247 | INFO     | 
[2025-12-14 02:51:20] 2025-12-14 07:50:21,250 | INFO     | architecture information:
[2025-12-14 02:51:20] 2025-12-14 07:50:21,254 | INFO     | executing command: cat /etc/os-release
[2025-12-14 02:51:20] 2025-12-14 07:50:21,292 | INFO     | cat /etc/os-release:
[2025-12-14 02:51:20] NAME="CentOS Linux"
[2025-12-14 02:51:20] VERSION="7 (Core)"
[2025-12-14 02:51:20] ID="centos"
[2025-12-14 02:51:20] ID_LIKE="rhel fedora"
[2025-12-14 02:51:20] VERSION_ID="7"
[2025-12-14 02:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 02:51:20] ANSI_COLOR="0;31"
[2025-12-14 02:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 02:51:20] HOME_URL="https://www.centos.org/"
[2025-12-14 02:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 02:51:20] 
[2025-12-14 02:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 02:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 02:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 02:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 02:51:20] 
[2025-12-14 02:51:20] 2025-12-14 07:50:21,292 | INFO     | ***************************************
[2025-12-14 02:51:20] 2025-12-14 07:50:21,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-14 02:51:20] 2025-12-14 07:50:21,814 | INFO     | sufficient remaining disk space (74097623040 B)
[2025-12-14 02:51:20] 2025-12-14 07:50:21,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 02:51:20] 2025-12-14 07:50:21,814 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 02:51:20] 2025-12-14 07:50:21,814 | INFO     | update_server=False
[2025-12-14 02:51:20] 2025-12-14 07:50:21,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 02:51:20] 2025-12-14 07:50:21,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 02:51:20] 2025-12-14 07:50:21,815 | INFO     | aborting loop
[2025-12-14 02:51:20] 2025-12-14 07:50:21,911 | INFO     | all data control threads have been joined
[2025-12-14 02:51:20] 2025-12-14 07:50:22,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 02:51:20] 2025-12-14 07:50:22,820 | INFO     | [job] retrieve thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:22,826 | INFO     | [job] job monitor thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:22,876 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:22,882 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:22,887 | INFO     | [job] validate thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:22,914 | INFO     | all payload control threads have been joined
[2025-12-14 02:51:20] 2025-12-14 07:50:22,924 | INFO     | [data] control thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:23,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 02:51:20] 2025-12-14 07:50:23,269 | INFO     | [payload] validate_post thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:23,381 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:23,387 | INFO     | [data] copytool_in thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:23,441 | INFO     | all job control threads have been joined
[2025-12-14 02:51:20] 2025-12-14 07:50:23,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 02:51:20] 2025-12-14 07:50:23,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:23,920 | INFO     | [payload] control thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:24,088 | INFO     | [payload] failed_post thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:24,450 | INFO     | [job] control thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:24,461 | INFO     | [job] queue monitor thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:24,466 | INFO     | [data] copytool_out thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:27,171 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 02:51:20] 2025-12-14 07:50:51,660 | INFO     | PID=2978855 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 02:51:20] 2025-12-14 07:50:51,660 | INFO     | .. there are 11 such processes running
[2025-12-14 02:51:20] 2025-12-14 07:50:51,661 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 02:51:20] 2025-12-14 07:50:51,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 02:51:20] 2025-12-14 07:50:51,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 02:51:20] 2025-12-14 07:51:12,459 | INFO     | [monitor] cgroup control has ended
[2025-12-14 02:51:20] 2025-12-14 07:51:12,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501102036800)>', '<ExcThread(monitor, started 140500208162560)>']
[2025-12-14 02:51:20] 2025-12-14 07:51:13,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 02:51:20] 2025-12-14 07:51:13,834 | INFO     | [monitor] control thread has ended
[2025-12-14 02:51:20] 2025-12-14 07:51:17,921 | INFO     | all workflow threads have been joined
[2025-12-14 02:51:20] 2025-12-14 07:51:17,981 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 02:51:20] 2025-12-14 07:51:17,982 | INFO     | traces error code: 0
[2025-12-14 02:51:20] 2025-12-14 07:51:17,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 02:51:20] 2025-12-14 07:51:18,135 [wrapper] ==== pilot stdout END ====
[2025-12-14 02:51:20] 2025-12-14 07:51:18,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 02:51:20] 2025-12-14 07:51:18,226 [wrapper] pilotpid: 2978855
[2025-12-14 02:51:20] 2025-12-14 07:51:18,269 [wrapper] Pilot exit status: 0
[2025-12-14 02:51:20] 2025-12-14 07:51:18,431 [wrapper] pandaids: 6929716087
[2025-12-14 02:51:20] 2025-12-14 07:51:19,138 [wrapper] cleanup supervisor_pilot 3341447 2978856
[2025-12-14 02:51:20] 2025-12-14 07:51:19,188 [wrapper] Test setup, not cleaning
[2025-12-14 02:51:20] 2025-12-14 07:51:19,237 [wrapper] apfmon messages muted
[2025-12-14 02:51:20] 2025-12-14 07:51:19,287 [wrapper] ==== wrapper stdout END ====
[2025-12-14 02:51:20] 2025-12-14 07:51:19,310 [wrapper] ==== wrapper stderr END ====
[2025-12-14 02:51:20]  *** Error codes and diagnostics ***
[2025-12-14 02:51:20]     "exeErrorCode": 0,
[2025-12-14 02:51:20]     "exeErrorDiag": "",
[2025-12-14 02:51:20]     "pilotErrorCode": 0,
[2025-12-14 02:51:20]     "pilotErrorDiag": "",
[2025-12-14 02:51:20]  *** Listing of results directory ***
[2025-12-14 02:51:20] total 370936
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-14 02:51:20] -rwx------. 1 boincer umatlas     36322 Dec 13 16:19 runpilot2-wrapper.sh
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 16:20 queuedata.json
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 02:51:20] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:02 run_atlas
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:02 job.xml
[2025-12-14 02:51:20] -rw-r--r--. 2 boincer umatlas 193831506 Dec 14 00:02 EVNT.47899040._000094.pool.root.1
[2025-12-14 02:51:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:02 start_atlas.sh
[2025-12-14 02:51:20] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:02 shared
[2025-12-14 02:51:20] -rw-r--r--. 2 boincer umatlas    592386 Dec 14 00:02 input.tar.gz
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:02 boinc_lockfile
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas      2491 Dec 14 00:02 pandaJob.out
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas        57 Dec 14 00:02 setup.sh.local
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas    991728 Dec 14 00:03 agis_schedconf.cvmfs.json
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas   1516240 Dec 14 00:03 agis_ddmendpoints.agis.ALL.json
[2025-12-14 02:51:20] drwx------. 5 boincer umatlas      4096 Dec 14 00:03 pilot3
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas      6844 Dec 14 02:46 init_data.xml
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas 178502676 Dec 14 02:49 HITS.47899042._001844.pool.root.1
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas       530 Dec 14 02:49 boinc_task_state.xml
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas      1050 Dec 14 02:49 memory_monitor_summary.json
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas    467582 Dec 14 02:50 log.47899042._001844.job.log.tgz.1
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas        95 Dec 14 02:50 pilot_heartbeat.json
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas      7816 Dec 14 02:50 heartbeat.json
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 02:51 boinc_mmap_file
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas        27 Dec 14 02:51 wrapper_checkpoint.txt
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas      4824 Dec 14 02:51 pilotlog.txt
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas   1321286 Dec 14 02:51 log.47899042._001844.job.log.1
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas       357 Dec 14 02:51 output.list
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas       620 Dec 14 02:51 runtime_log
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas   1812480 Dec 14 02:51 result.tar.gz
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas      9355 Dec 14 02:51 runtime_log.err
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas       657 Dec 14 02:51 agaNDmxCmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcKUKDmBlJlvn.diag
[2025-12-14 02:51:20] -rw-r--r--. 1 boincer umatlas     21243 Dec 14 02:51 stderr.txt
[2025-12-14 02:51:20] HITS file was successfully produced:
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas 178502676 Dec 14 02:49 shared/HITS.pool.root.1
[2025-12-14 02:51:20]  *** Contents of shared directory: ***
[2025-12-14 02:51:20] total 365984
[2025-12-14 02:51:20] -rw-r--r--. 2 boincer umatlas 193831506 Dec 14 00:02 ATLAS.root_0
[2025-12-14 02:51:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:02 start_atlas.sh
[2025-12-14 02:51:20] -rw-r--r--. 2 boincer umatlas    592386 Dec 14 00:02 input.tar.gz
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas 178502676 Dec 14 02:49 HITS.pool.root.1
[2025-12-14 02:51:20] -rw-------. 1 boincer umatlas   1812480 Dec 14 02:51 result.tar.gz
02:51:21 (2973244): run_atlas exited; CPU time 37799.580261
02:51:21 (2973244): called boinc_finish(0)

</stderr_txt>
]]>

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