Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:58 (559529): wrapper (7.7.26015): starting
00:02:58 (559529): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 00:02:58] Arguments: --nthreads 8
[2025-12-14 00:02:58] Threads: 8
[2025-12-14 00:02:58] Checking for CVMFS
[2025-12-14 00:02:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:02:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:02:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:03:00] 2.13.3.0 13172 55526 386872 153984 0 488 23174216 32935937 33668 16776704 0 283926380 99.464 372163101 34163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:03:00] CVMFS is ok
[2025-12-14 00:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:03:00] Further information can be found at the LHC@home message board.
[2025-12-14 00:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:03:00] Checking for apptainer binary...
[2025-12-14 00:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:03:00] Running /usr/bin/apptainer --version
[2025-12-14 00:03:00] apptainer version 1.4.5-2.el9
[2025-12-14 00:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:03:00] c6-6-8-3.aglt2.org
[2025-12-14 00:03:00] apptainer works
[2025-12-14 00:03:00] Set ATHENA_PROC_NUMBER=8
[2025-12-14 00:03:00] Set ATHENA_CORE_NUMBER=8
[2025-12-14 00:03:00] Starting ATLAS job with PandaID=6929716176
[2025-12-14 00:03:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 03:46:22]  *** The last 200 lines of the pilot log: ***
[2025-12-14 03:46:22] 2025-12-14 08:45:19,803 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 03:46:22] 2025-12-14 08:45:19,828 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2654.195760416667
[2025-12-14 03:46:22] 2025-12-14 08:45:19,846 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6929716176/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 03:46:22] 2025-12-14 08:45:19,848 | INFO     | extracted standard info from prmon json
[2025-12-14 03:46:22] 2025-12-14 08:45:19,848 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 03:46:22] 2025-12-14 08:45:19,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 03:46:22] 2025-12-14 08:45:19,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 03:46:22] 2025-12-14 08:45:19,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 03:46:22] 2025-12-14 08:45:19,899 | INFO     | fitting pss+swap vs Time
[2025-12-14 03:46:22] 2025-12-14 08:45:19,900 | INFO     | sum of square deviations: 3124931943.833344
[2025-12-14 03:46:22] 2025-12-14 08:45:19,947 | INFO     | sum of deviations: 136077755369.61115
[2025-12-14 03:46:22] 2025-12-14 08:45:19,947 | INFO     | mean x: 1765695302.6388888
[2025-12-14 03:46:22] 2025-12-14 08:45:19,947 | INFO     | mean y: 2391656.3796296297
[2025-12-14 03:46:22] 2025-12-14 08:45:19,947 | INFO     | intersect: -76886275926.89757
[2025-12-14 03:46:22] 2025-12-14 08:45:19,947 | INFO     | chi2: 5.106486297234212
[2025-12-14 03:46:22] 2025-12-14 08:45:19,948 | INFO     | sum of square deviations: 2912918513.734601
[2025-12-14 03:46:22] 2025-12-14 08:45:19,977 | INFO     | sum of deviations: 145668885171.60666
[2025-12-14 03:46:22] 2025-12-14 08:45:19,978 | INFO     | mean x: 1765695150.1421802
[2025-12-14 03:46:22] 2025-12-14 08:45:19,978 | INFO     | mean y: 2398370.2464454975
[2025-12-14 03:46:22] 2025-12-14 08:45:19,978 | INFO     | intersect: -88296276261.87146
[2025-12-14 03:46:22] 2025-12-14 08:45:19,978 | INFO     | chi2: 4.4051194869882595
[2025-12-14 03:46:22] 2025-12-14 08:45:19,978 | INFO     | current chi2=4.4051194869882595 (change=13.734822134465109 %)
[2025-12-14 03:46:22] 2025-12-14 08:45:19,979 | INFO     | right removable region: 210
[2025-12-14 03:46:22] 2025-12-14 08:45:19,979 | INFO     | sum of square deviations: 2912900213.734601
[2025-12-14 03:46:22] 2025-12-14 08:45:20,019 | INFO     | sum of deviations: 74272357754.00949
[2025-12-14 03:46:22] 2025-12-14 08:45:20,019 | INFO     | mean x: 1765695455.1421802
[2025-12-14 03:46:22] 2025-12-14 08:45:20,019 | INFO     | mean y: 2436033.066350711
[2025-12-14 03:46:22] 2025-12-14 08:45:20,020 | INFO     | intersect: -45018798786.650406
[2025-12-14 03:46:22] 2025-12-14 08:45:20,020 | INFO     | chi2: 1.887533532177793
[2025-12-14 03:46:22] 2025-12-14 08:45:20,020 | INFO     | current chi2=1.887533532177793 (change=63.036549550713104 %)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,020 | INFO     | sum of square deviations: 2710682621.131087
[2025-12-14 03:46:22] 2025-12-14 08:45:20,022 | INFO     | sum of deviations: 41909807460.71849
[2025-12-14 03:46:22] 2025-12-14 08:45:20,022 | INFO     | mean x: 1765695607.645631
[2025-12-14 03:46:22] 2025-12-14 08:45:20,022 | INFO     | mean y: 2460338.2427184465
[2025-12-14 03:46:22] 2025-12-14 08:45:20,055 | INFO     | monitor loop #737: job 0:6929716176 is in state 'finished'
[2025-12-14 03:46:22] 2025-12-14 08:45:20,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,073 | INFO     | intersect: -27296922619.319008
[2025-12-14 03:46:22] 2025-12-14 08:45:20,074 | INFO     | chi2: 1.0484854019645982
[2025-12-14 03:46:22] 2025-12-14 08:45:20,074 | INFO     | current chi2=1.0484854019645982 (change=44.45209136206022 %)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,074 | INFO     | sum of square deviations: 2518046603.5223813
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | sum of deviations: 25628848284.85073
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | mean x: 1765695760.1492538
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | mean y: 2473203.3383084578
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | intersect: -17968897418.145576
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | chi2: 0.8764431211600889
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | current chi2=0.8764431211600889 (change=16.408648177852093 %)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,076 | INFO     | left removable region: 30
[2025-12-14 03:46:22] 2025-12-14 08:45:20,077 | INFO     | sum of square deviations: 1808379618.0000024
[2025-12-14 03:46:22] 2025-12-14 08:45:20,110 | INFO     | sum of deviations: 10963369653.666666
[2025-12-14 03:46:22] 2025-12-14 08:45:20,110 | INFO     | mean x: 1765696034.6666667
[2025-12-14 03:46:22] 2025-12-14 08:45:20,110 | INFO     | mean y: 2506192.0944444444
[2025-12-14 03:46:22] 2025-12-14 08:45:20,110 | INFO     | intersect: -10702092627.412971
[2025-12-14 03:46:22] 2025-12-14 08:45:20,111 | INFO     | chi2: 0.0030298742364345283
[2025-12-14 03:46:22] 2025-12-14 08:45:20,111 | INFO     | current memory leak: 6.06 B/s (using 180 data points, chi2=0.00)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | could have reported an average CPU frequency of 2626 MHz (11 samples)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | ..............................
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . Timing measurements:
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . get job = 0 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . initial setup = 8 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . payload setup = 30 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . stage-in = 0 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . payload execution = 13157 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . stage-out = 5 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | . log creation = 0 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,112 | INFO     | ..............................
[2025-12-14 03:46:22] 2025-12-14 08:45:20,369 | INFO     | 
[2025-12-14 03:46:22] 2025-12-14 08:45:20,371 | INFO     | job summary report
[2025-12-14 03:46:22] 2025-12-14 08:45:20,371 | INFO     | --------------------------------------------------
[2025-12-14 03:46:22] 2025-12-14 08:45:20,371 | INFO     | PanDA job id: 6929716176
[2025-12-14 03:46:22] 2025-12-14 08:45:20,371 | INFO     | task id: 47899042
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | errors: (none)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | pilot state: finished 
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | transexitcode: 0
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | exeerrorcode: 0
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | exeerrordiag: 
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | exitcode: 0
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | exitmsg: OK
[2025-12-14 03:46:22] 2025-12-14 08:45:20,394 | INFO     | cpuconsumptiontime: 41963 s
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | nevents: 400
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | neventsw: 0
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | pid: 594868
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | pgrp: 594868
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | corecount: 8
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | event service: False
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | sizes: {0: 2283106, 1: 2283791, 2: 2283990, 3: 2284018, 14: 2284018, 25: 2284046, 27: 2284464, 36: 2284492, 13193: 2314457, 13194: 2314456, 13199: 2323510, 13200: 
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | --------------------------------------------------
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | 
[2025-12-14 03:46:22] 2025-12-14 08:45:20,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-14 03:46:22] 2025-12-14 08:45:20,568 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,568 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,568 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 03:46:22] 2025-12-14 08:45:20,596 | INFO     | job 6929716176 has completed (purged errors)
[2025-12-14 03:46:22] 2025-12-14 08:45:20,596 | INFO     | overall cleanup function is called
[2025-12-14 03:46:22] 2025-12-14 08:45:21,611 | INFO     | --- collectZombieJob: --- 10, [594868]
[2025-12-14 03:46:22] 2025-12-14 08:45:21,612 | INFO     | zombie collector waiting for pid 594868
[2025-12-14 03:46:22] 2025-12-14 08:45:21,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 03:46:22] 2025-12-14 08:45:21,612 | INFO     | collected zombie processes
[2025-12-14 03:46:22] 2025-12-14 08:45:21,612 | INFO     | will attempt to kill all subprocesses of pid=594868
[2025-12-14 03:46:22] 2025-12-14 08:45:23,082 | INFO     | process IDs to be killed: [594868] (in reverse order)
[2025-12-14 03:46:22] 2025-12-14 08:45:23,368 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 03:46:22] 2025-12-14 08:45:23,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 03:46:22] 2025-12-14 08:45:23,402 | INFO     | did not find any defunct processes belonging to 594868
[2025-12-14 03:46:22] 2025-12-14 08:45:23,420 | INFO     | did not find any defunct processes belonging to 594868
[2025-12-14 03:46:22] 2025-12-14 08:45:23,421 | INFO     | ready for new job
[2025-12-14 03:46:22] 2025-12-14 08:45:23,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 03:46:22] 2025-12-14 08:45:23,423 | INFO     | ***************************************
[2025-12-14 03:46:22] 2025-12-14 08:45:23,423 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 03:46:22] 2025-12-14 08:45:23,424 | INFO     | ***************************************
[2025-12-14 03:46:22] 2025-12-14 08:45:23,424 | INFO     | 
[2025-12-14 03:46:22] 2025-12-14 08:45:23,429 | INFO     | architecture information:
[2025-12-14 03:46:22] 2025-12-14 08:45:23,429 | INFO     | executing command: cat /etc/os-release
[2025-12-14 03:46:22] 2025-12-14 08:45:23,475 | INFO     | cat /etc/os-release:
[2025-12-14 03:46:22] NAME="CentOS Linux"
[2025-12-14 03:46:22] VERSION="7 (Core)"
[2025-12-14 03:46:22] ID="centos"
[2025-12-14 03:46:22] ID_LIKE="rhel fedora"
[2025-12-14 03:46:22] VERSION_ID="7"
[2025-12-14 03:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 03:46:22] ANSI_COLOR="0;31"
[2025-12-14 03:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 03:46:22] HOME_URL="https://www.centos.org/"
[2025-12-14 03:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 03:46:22] 
[2025-12-14 03:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 03:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 03:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 03:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 03:46:22] 
[2025-12-14 03:46:22] 2025-12-14 08:45:23,476 | INFO     | ***************************************
[2025-12-14 03:46:22] 2025-12-14 08:45:23,980 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-14 03:46:22] 2025-12-14 08:45:24,113 | INFO     | sufficient remaining disk space (93864329216 B)
[2025-12-14 03:46:22] 2025-12-14 08:45:24,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 03:46:22] 2025-12-14 08:45:24,114 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 03:46:22] 2025-12-14 08:45:24,114 | INFO     | update_server=False
[2025-12-14 03:46:22] 2025-12-14 08:45:24,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 03:46:22] 2025-12-14 08:45:24,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 03:46:22] 2025-12-14 08:45:24,115 | INFO     | aborting loop
[2025-12-14 03:46:22] 2025-12-14 08:45:24,192 | INFO     | all payload control threads have been joined
[2025-12-14 03:46:22] 2025-12-14 08:45:24,632 | INFO     | all data control threads have been joined
[2025-12-14 03:46:22] 2025-12-14 08:45:25,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 03:46:22] 2025-12-14 08:45:25,120 | INFO     | [job] retrieve thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,127 | INFO     | [job] job monitor thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,144 | INFO     | all job control threads have been joined
[2025-12-14 03:46:22] 2025-12-14 08:45:25,164 | INFO     | [payload] validate_post thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,187 | INFO     | [payload] failed_post thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,198 | INFO     | [payload] control thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 03:46:22] 2025-12-14 08:45:25,639 | INFO     | [data] control thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,672 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,746 | INFO     | [job] validate thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:25,826 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:26,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:26,150 | INFO     | [job] control thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:26,329 | INFO     | [data] copytool_in thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:26,425 | INFO     | [job] queue monitor thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:26,590 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:27,122 | INFO     | [data] copytool_out thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:27,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 03:46:22] 2025-12-14 08:45:31,596 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 03:46:22] 2025-12-14 08:45:53,308 | INFO     | PID=563746 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 03:46:22] 2025-12-14 08:45:53,308 | INFO     | .. there are 29 such processes running
[2025-12-14 03:46:22] 2025-12-14 08:45:53,309 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 03:46:22] 2025-12-14 08:45:53,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 03:46:22] 2025-12-14 08:45:53,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 03:46:22] 2025-12-14 08:46:16,266 | INFO     | [monitor] cgroup control has ended
[2025-12-14 03:46:22] 2025-12-14 08:46:16,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687826417472)>', '<ExcThread(monitor, started 139687461103360)>']
[2025-12-14 03:46:22] 2025-12-14 08:46:17,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 03:46:22] 2025-12-14 08:46:17,455 | INFO     | [monitor] control thread has ended
[2025-12-14 03:46:22] 2025-12-14 08:46:21,550 | INFO     | all workflow threads have been joined
[2025-12-14 03:46:22] 2025-12-14 08:46:21,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 03:46:22] 2025-12-14 08:46:21,553 | INFO     | traces error code: 0
[2025-12-14 03:46:22] 2025-12-14 08:46:21,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 03:46:22] 2025-12-14 08:46:22,001 [wrapper] ==== pilot stdout END ====
[2025-12-14 03:46:22] 2025-12-14 08:46:22,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 03:46:22] 2025-12-14 08:46:22,007 [wrapper] pilotpid: 563746
[2025-12-14 03:46:22] 2025-12-14 08:46:22,010 [wrapper] Pilot exit status: 0
[2025-12-14 03:46:22] 2025-12-14 08:46:22,067 [wrapper] pandaids: 6929716176
[2025-12-14 03:46:22] 2025-12-14 08:46:22,175 [wrapper] cleanup supervisor_pilot 1362032 563747
[2025-12-14 03:46:22] 2025-12-14 08:46:22,178 [wrapper] Test setup, not cleaning
[2025-12-14 03:46:22] 2025-12-14 08:46:22,191 [wrapper] apfmon messages muted
[2025-12-14 03:46:22] 2025-12-14 08:46:22,211 [wrapper] ==== wrapper stdout END ====
[2025-12-14 03:46:22] 2025-12-14 08:46:22,232 [wrapper] ==== wrapper stderr END ====
[2025-12-14 03:46:22]  *** Error codes and diagnostics ***
[2025-12-14 03:46:22]     "exeErrorCode": 0,
[2025-12-14 03:46:22]     "exeErrorDiag": "",
[2025-12-14 03:46:22]     "pilotErrorCode": 0,
[2025-12-14 03:46:22]     "pilotErrorDiag": "",
[2025-12-14 03:46:22]  *** Listing of results directory ***
[2025-12-14 03:46:22] total 381368
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 16:19 pilot3.tar.gz
[2025-12-14 03:46:22] -rwx------. 1 boincer umatlas     36322 Dec 13 16:19 runpilot2-wrapper.sh
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 16:21 queuedata.json
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 03:46:22] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:02 run_atlas
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:02 job.xml
[2025-12-14 03:46:22] -rw-r--r--. 2 boincer umatlas 197356158 Dec 14 00:02 EVNT.47899040._000098.pool.root.1
[2025-12-14 03:46:22] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:02 shared
[2025-12-14 03:46:22] -rw-r--r--. 2 boincer umatlas    592388 Dec 14 00:02 input.tar.gz
[2025-12-14 03:46:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:02 start_atlas.sh
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:02 boinc_lockfile
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas      2491 Dec 14 00:03 pandaJob.out
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas        57 Dec 14 00:03 setup.sh.local
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas    991728 Dec 14 00:03 agis_schedconf.cvmfs.json
[2025-12-14 03:46:22] drwx------. 5 boincer umatlas      4096 Dec 14 00:03 pilot3
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas 185229188 Dec 14 03:43 HITS.47899042._001933.pool.root.1
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas       530 Dec 14 03:43 boinc_task_state.xml
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas      1044 Dec 14 03:44 memory_monitor_summary.json
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas   1516240 Dec 14 03:44 agis_ddmendpoints.agis.ALL.json
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas    426662 Dec 14 03:44 log.47899042._001933.job.log.tgz.1
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas      7823 Dec 14 03:45 heartbeat.json
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas        95 Dec 14 03:45 pilot_heartbeat.json
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas      6878 Dec 14 03:46 init_data.xml
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas        28 Dec 14 03:46 wrapper_checkpoint.txt
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas      4823 Dec 14 03:46 pilotlog.txt
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas   1579550 Dec 14 03:46 log.47899042._001933.job.log.1
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 03:46 boinc_mmap_file
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas       357 Dec 14 03:46 output.list
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas       620 Dec 14 03:46 runtime_log
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas   2027520 Dec 14 03:46 result.tar.gz
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas      9343 Dec 14 03:46 runtime_log.err
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas       655 Dec 14 03:46 qwZNDmzCmo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKCQKDmJMPa7n.diag
[2025-12-14 03:46:22] -rw-r--r--. 1 boincer umatlas     21239 Dec 14 03:46 stderr.txt
[2025-12-14 03:46:22] HITS file was successfully produced:
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas 185229188 Dec 14 03:43 shared/HITS.pool.root.1
[2025-12-14 03:46:22]  *** Contents of shared directory: ***
[2025-12-14 03:46:22] total 376204
[2025-12-14 03:46:22] -rw-r--r--. 2 boincer umatlas 197356158 Dec 14 00:02 ATLAS.root_0
[2025-12-14 03:46:22] -rw-r--r--. 2 boincer umatlas    592388 Dec 14 00:02 input.tar.gz
[2025-12-14 03:46:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:02 start_atlas.sh
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas 185229188 Dec 14 03:43 HITS.pool.root.1
[2025-12-14 03:46:22] -rw-------. 1 boincer umatlas   2027520 Dec 14 03:46 result.tar.gz
03:46:24 (559529): run_atlas exited; CPU time 42677.608629
03:46:24 (559529): called boinc_finish(0)

</stderr_txt>
]]>

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