Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:10:25 (6824): wrapper (7.7.26015): starting
12:10:25 (6824): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 12:10:25] Arguments: --nthreads 8
[2025-12-14 12:10:25] Threads: 8
[2025-12-14 12:10:25] Checking for CVMFS
[2025-12-14 12:10:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 12:10:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 12:10:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 12:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 12:10:28] 2.11.2.0 29536 113972 126336 153992 0 156 21890823 25165825 4284 130560 12 33034081 99.863 20836000 1965 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-14 12:10:28] CVMFS is ok
[2025-12-14 12:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 12:10:28] Checking for apptainer binary...
[2025-12-14 12:10:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 12:10:28] Running /usr/bin/apptainer --version
[2025-12-14 12:10:28] apptainer version 1.3.2-1.el7
[2025-12-14 12:10:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 12:10:40] cg-vwn448.simple-grid.lan
[2025-12-14 12:10:40] apptainer works
[2025-12-14 12:10:41] Set ATHENA_PROC_NUMBER=8
[2025-12-14 12:10:41] Set ATHENA_CORE_NUMBER=8
[2025-12-14 12:10:41] Starting ATLAS job with PandaID=6929714141
[2025-12-14 12:10:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 16:28:49]  *** The last 200 lines of the pilot log: ***
[2025-12-14 16:28:49] 2025-12-14 15:27:53,605 | INFO     | monitor loop #1107: job 0:6929714141 is in state 'finished'
[2025-12-14 16:28:49] 2025-12-14 15:27:53,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,371 | INFO     | time since job start (15220s) is within the limit (174528.0s)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,865 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 16:28:49] 2025-12-14 15:27:54,866 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-14 16:28:49] 2025-12-14 15:27:54,868 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6929714141/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,869 | INFO     | extracted standard info from prmon json
[2025-12-14 16:28:49] 2025-12-14 15:27:54,869 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 16:28:49] 2025-12-14 15:27:54,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 16:28:49] 2025-12-14 15:27:54,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 16:28:49] 2025-12-14 15:27:54,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 16:28:49] 2025-12-14 15:27:54,875 | INFO     | fitting pss+swap vs Time
[2025-12-14 16:28:49] 2025-12-14 15:27:54,876 | INFO     | sum of square deviations: 4286517580.0
[2025-12-14 16:28:49] 2025-12-14 15:27:54,878 | INFO     | sum of deviations: 2274172262.49996
[2025-12-14 16:28:49] 2025-12-14 15:27:54,878 | INFO     | mean x: 1765718643.5
[2025-12-14 16:28:49] 2025-12-14 15:27:54,878 | INFO     | mean y: 2499594.0208333335
[2025-12-14 16:28:49] 2025-12-14 15:27:54,879 | INFO     | intersect: -934286103.8058754
[2025-12-14 16:28:49] 2025-12-14 15:27:54,879 | INFO     | chi2: 4.910519021221732
[2025-12-14 16:28:49] 2025-12-14 15:27:54,880 | INFO     | sum of square deviations: 4024149870.0
[2025-12-14 16:28:49] 2025-12-14 15:27:54,882 | INFO     | sum of deviations: 18424989305.00001
[2025-12-14 16:28:49] 2025-12-14 15:27:54,882 | INFO     | mean x: 1765718491.0
[2025-12-14 16:28:49] 2025-12-14 15:27:54,882 | INFO     | mean y: 2508825.2638297873
[2025-12-14 16:28:49] 2025-12-14 15:27:54,882 | INFO     | intersect: -8082017189.74658
[2025-12-14 16:28:49] 2025-12-14 15:27:54,882 | INFO     | chi2: 4.1719578861723186
[2025-12-14 16:28:49] 2025-12-14 15:27:54,883 | INFO     | current chi2=4.1719578861723186 (change=15.040388436692382 %)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,883 | INFO     | right removable region: 234
[2025-12-14 16:28:49] 2025-12-14 15:27:54,883 | INFO     | sum of square deviations: 4024149870.0
[2025-12-14 16:28:49] 2025-12-14 15:27:54,885 | INFO     | sum of deviations: -72698840408.99998
[2025-12-14 16:28:49] 2025-12-14 15:27:54,885 | INFO     | mean x: 1765718796.0
[2025-12-14 16:28:49] 2025-12-14 15:27:54,885 | INFO     | mean y: 2543077.455319149
[2025-12-14 16:28:49] 2025-12-14 15:27:54,886 | INFO     | intersect: 31901382112.885082
[2025-12-14 16:28:49] 2025-12-14 15:27:54,886 | INFO     | chi2: 1.1578735589246336
[2025-12-14 16:28:49] 2025-12-14 15:27:54,886 | INFO     | current chi2=1.1578735589246336 (change=76.42054630232231 %)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,887 | INFO     | sum of square deviations: 3772712597.5
[2025-12-14 16:28:49] 2025-12-14 15:27:54,889 | INFO     | sum of deviations: -83022217681.99998
[2025-12-14 16:28:49] 2025-12-14 15:27:54,889 | INFO     | mean x: 1765718948.5
[2025-12-14 16:28:49] 2025-12-14 15:27:54,889 | INFO     | mean y: 2549296.495652174
[2025-12-14 16:28:49] 2025-12-14 15:27:54,889 | INFO     | intersect: 38858915669.25885
[2025-12-14 16:28:49] 2025-12-14 15:27:54,890 | INFO     | chi2: 1.0164923429654513
[2025-12-14 16:28:49] 2025-12-14 15:27:54,890 | INFO     | current chi2=1.0164923429654513 (change=12.210419252555438 %)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,890 | INFO     | left removable region: 20
[2025-12-14 16:28:49] 2025-12-14 15:27:54,890 | INFO     | sum of square deviations: 3038856977.5
[2025-12-14 16:28:49] 2025-12-14 15:27:54,892 | INFO     | sum of deviations: -56125412438.50004
[2025-12-14 16:28:49] 2025-12-14 15:27:54,892 | INFO     | mean x: 1765719070.5
[2025-12-14 16:28:49] 2025-12-14 15:27:54,893 | INFO     | mean y: 2553813.6775700934
[2025-12-14 16:28:49] 2025-12-14 15:27:54,893 | INFO     | intersect: 32614062619.81632
[2025-12-14 16:28:49] 2025-12-14 15:27:54,893 | INFO     | chi2: 0.20783463897542587
[2025-12-14 16:28:49] 2025-12-14 15:27:54,893 | INFO     | current memory leak: -18.47 B/s (using 214 data points, chi2=0.21)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,894 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-12-14 16:28:49] 2025-12-14 15:27:54,894 | INFO     | ..............................
[2025-12-14 16:28:49] 2025-12-14 15:27:54,894 | INFO     | . Timing measurements:
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . get job = 0 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . initial setup = 8 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . payload setup = 136 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . stage-in = 0 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . payload execution = 14782 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . stage-out = 3 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | . log creation = 0 s
[2025-12-14 16:28:49] 2025-12-14 15:27:54,895 | INFO     | ..............................
[2025-12-14 16:28:49] 2025-12-14 15:27:55,029 | INFO     | 
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | job summary report
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | --------------------------------------------------
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | PanDA job id: 6929714141
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | task id: 47899042
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | errors: (none)
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 16:28:49] 2025-12-14 15:27:55,030 | INFO     | pilot state: finished 
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | transexitcode: 0
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | exeerrorcode: 0
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | exeerrordiag: 
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | exitcode: 0
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | exitmsg: OK
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | cpuconsumptiontime: 56107 s
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | nevents: 400
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | neventsw: 0
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | pid: 17175
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | pgrp: 17175
[2025-12-14 16:28:49] 2025-12-14 15:27:55,031 | INFO     | corecount: 8
[2025-12-14 16:28:49] 2025-12-14 15:27:55,032 | INFO     | event service: False
[2025-12-14 16:28:49] 2025-12-14 15:27:55,032 | INFO     | sizes: {0: 2283764, 1: 2283963, 12: 2283963, 22: 2283991, 33: 2284019, 44: 2284075, 55: 2284231, 65: 2284259, 76: 2284287, 87: 2284343, 91: 2284633, 98: 2284941, 1
[2025-12-14 16:28:49] 2025-12-14 15:27:55,032 | INFO     | --------------------------------------------------
[2025-12-14 16:28:49] 2025-12-14 15:27:55,032 | INFO     | 
[2025-12-14 16:28:49] 2025-12-14 15:27:55,032 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-12-14 16:28:49] 2025-12-14 15:27:55,517 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | job 6929714141 has completed (purged errors)
[2025-12-14 16:28:49] 2025-12-14 15:27:55,519 | INFO     | overall cleanup function is called
[2025-12-14 16:28:49] 2025-12-14 15:27:55,578 | INFO     | PID=10627 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 16:28:49] 2025-12-14 15:27:55,578 | INFO     | .. there are 9 such processes running
[2025-12-14 16:28:49] 2025-12-14 15:27:56,531 | INFO     | --- collectZombieJob: --- 10, [17175]
[2025-12-14 16:28:49] 2025-12-14 15:27:56,531 | INFO     | zombie collector waiting for pid 17175
[2025-12-14 16:28:49] 2025-12-14 15:27:56,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 16:28:49] 2025-12-14 15:27:56,531 | INFO     | collected zombie processes
[2025-12-14 16:28:49] 2025-12-14 15:27:56,531 | INFO     | will attempt to kill all subprocesses of pid=17175
[2025-12-14 16:28:49] 2025-12-14 15:27:56,668 | INFO     | process IDs to be killed: [17175] (in reverse order)
[2025-12-14 16:28:49] 2025-12-14 15:27:57,556 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 16:28:49] 2025-12-14 15:27:57,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 16:28:49] 2025-12-14 15:27:57,560 | INFO     | did not find any defunct processes belonging to 17175
[2025-12-14 16:28:49] 2025-12-14 15:27:57,563 | INFO     | did not find any defunct processes belonging to 17175
[2025-12-14 16:28:49] 2025-12-14 15:27:57,563 | INFO     | ready for new job
[2025-12-14 16:28:49] 2025-12-14 15:27:57,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 16:28:49] 2025-12-14 15:27:57,569 | INFO     | ***************************************
[2025-12-14 16:28:49] 2025-12-14 15:27:57,569 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 16:28:49] 2025-12-14 15:27:57,569 | INFO     | ***************************************
[2025-12-14 16:28:49] 2025-12-14 15:27:57,569 | INFO     | 
[2025-12-14 16:28:49] 2025-12-14 15:27:57,570 | INFO     | pilot is running in a VM
[2025-12-14 16:28:49] 2025-12-14 15:27:57,570 | INFO     | architecture information:
[2025-12-14 16:28:49] 2025-12-14 15:27:57,574 | INFO     | executing command: cat /etc/os-release
[2025-12-14 16:28:49] 2025-12-14 15:27:57,822 | INFO     | cat /etc/os-release:
[2025-12-14 16:28:49] NAME="CentOS Linux"
[2025-12-14 16:28:49] VERSION="7 (Core)"
[2025-12-14 16:28:49] ID="centos"
[2025-12-14 16:28:49] ID_LIKE="rhel fedora"
[2025-12-14 16:28:49] VERSION_ID="7"
[2025-12-14 16:28:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 16:28:49] ANSI_COLOR="0;31"
[2025-12-14 16:28:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 16:28:49] HOME_URL="https://www.centos.org/"
[2025-12-14 16:28:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 16:28:49] 
[2025-12-14 16:28:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 16:28:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 16:28:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 16:28:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 16:28:49] 
[2025-12-14 16:28:49] 2025-12-14 15:27:57,822 | INFO     | ***************************************
[2025-12-14 16:28:49] 2025-12-14 15:27:58,325 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-12-14 16:28:49] 2025-12-14 15:27:58,502 | INFO     | sufficient remaining disk space (497505271808 B)
[2025-12-14 16:28:49] 2025-12-14 15:27:58,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 16:28:49] 2025-12-14 15:27:58,503 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 16:28:49] 2025-12-14 15:27:58,503 | INFO     | update_server=False
[2025-12-14 16:28:49] 2025-12-14 15:27:58,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 16:28:49] 2025-12-14 15:27:58,626 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 16:28:49] 2025-12-14 15:27:58,626 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 16:28:49] 2025-12-14 15:27:58,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 16:28:49] 2025-12-14 15:27:58,626 | INFO     | will abort loop
[2025-12-14 16:28:49] 2025-12-14 15:27:58,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 16:28:49] 2025-12-14 15:27:59,505 | INFO     | all data control threads have been joined
[2025-12-14 16:28:49] 2025-12-14 15:27:59,509 | INFO     | [job] retrieve thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:27:59,609 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:27:59,632 | INFO     | [job] job monitor thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:27:59,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 16:28:49] 2025-12-14 15:27:59,719 | INFO     | all job control threads have been joined
[2025-12-14 16:28:49] 2025-12-14 15:27:59,832 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:27:59,921 | INFO     | [job] validate thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:00,005 | INFO     | all payload control threads have been joined
[2025-12-14 16:28:49] 2025-12-14 15:28:00,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 16:28:49] 2025-12-14 15:28:00,100 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:00,102 | INFO     | [data] copytool_in thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:00,166 | INFO     | [payload] failed_post thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:00,511 | INFO     | [data] control thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:00,725 | INFO     | [job] control thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:00,948 | INFO     | [payload] validate_post thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:01,011 | INFO     | [payload] control thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:01,050 | INFO     | [job] queue monitor thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:01,688 | INFO     | [data] copytool_out thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:02,773 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:08,927 | INFO     | job.realtimelogging is not enabled
[2025-12-14 16:28:49] 2025-12-14 15:28:09,933 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 16:28:49] 2025-12-14 15:28:27,816 | INFO     | PID=10627 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 16:28:49] 2025-12-14 15:28:27,816 | INFO     | .. there are 9 such processes running
[2025-12-14 16:28:49] 2025-12-14 15:28:27,817 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 16:28:49] 2025-12-14 15:28:27,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 16:28:49] 2025-12-14 15:28:27,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 16:28:49] 2025-12-14 15:28:39,498 | INFO     | [monitor] cgroup control has ended
[2025-12-14 16:28:49] 2025-12-14 15:28:39,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777543071552)>', '<ExcThread(monitor, started 139776892073728)>']
[2025-12-14 16:28:49] 2025-12-14 15:28:39,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 16:28:49] 2025-12-14 15:28:39,900 | INFO     | [monitor] control thread has ended
[2025-12-14 16:28:49] 2025-12-14 15:28:44,883 | INFO     | all workflow threads have been joined
[2025-12-14 16:28:49] 2025-12-14 15:28:44,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 16:28:49] 2025-12-14 15:28:44,883 | INFO     | traces error code: 0
[2025-12-14 16:28:49] 2025-12-14 15:28:44,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 16:28:49] 2025-12-14 15:28:45,199 [wrapper] ==== pilot stdout END ====
[2025-12-14 16:28:49] 2025-12-14 15:28:45,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 16:28:49] 2025-12-14 15:28:45,370 [wrapper] pilotpid: 10627
[2025-12-14 16:28:49] 2025-12-14 15:28:45,407 [wrapper] Pilot exit status: 0
[2025-12-14 16:28:49] 2025-12-14 15:28:45,889 [wrapper] pandaids: 6929714141
[2025-12-14 16:28:49] 2025-12-14 15:28:46,749 [wrapper] cleanup supervisor_pilot 11516 10628
[2025-12-14 16:28:49] 2025-12-14 15:28:46,844 [wrapper] Test setup, not cleaning
[2025-12-14 16:28:49] 2025-12-14 15:28:46,954 [wrapper] apfmon messages muted
[2025-12-14 16:28:49] 2025-12-14 15:28:47,029 [wrapper] ==== wrapper stdout END ====
[2025-12-14 16:28:49] 2025-12-14 15:28:47,150 [wrapper] ==== wrapper stderr END ====
[2025-12-14 16:28:49]  *** Error codes and diagnostics ***
[2025-12-14 16:28:49]     "exeErrorCode": 0,
[2025-12-14 16:28:49]     "exeErrorDiag": "",
[2025-12-14 16:28:49]     "pilotErrorCode": 0,
[2025-12-14 16:28:49]     "pilotErrorDiag": "",
[2025-12-14 16:28:49]  *** Listing of results directory ***
[2025-12-14 16:28:49] total 384848
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc    579449 Dec 13 22:19 pilot3.tar.gz
[2025-12-14 16:28:49] -rwx------. 1 boinc boinc     36322 Dec 13 22:19 runpilot2-wrapper.sh
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc      5112 Dec 13 22:20 queuedata.json
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc       100 Dec 14 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 16:28:49] -rwxr-xr-x. 1 boinc boinc      7986 Dec 14 12:10 run_atlas
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc       105 Dec 14 12:10 job.xml
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc      6393 Dec 14 12:10 init_data.xml
[2025-12-14 16:28:49] -rw-r--r--. 2 boinc boinc 201453713 Dec 14 12:10 EVNT.47899040._000039.pool.root.1
[2025-12-14 16:28:49] -rw-r--r--. 2 boinc boinc     15847 Dec 14 12:10 start_atlas.sh
[2025-12-14 16:28:49] drwxrwx--x. 2 boinc boinc        68 Dec 14 12:10 shared
[2025-12-14 16:28:49] -rw-r--r--. 2 boinc boinc    592388 Dec 14 12:10 input.tar.gz
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc         0 Dec 14 12:10 boinc_lockfile
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc      2491 Dec 14 12:10 pandaJob.out
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc    991720 Dec 14 12:14 agis_schedconf.cvmfs.json
[2025-12-14 16:28:49] drwx------. 5 boinc boinc      4096 Dec 14 12:14 pilot3
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc 183744332 Dec 14 16:24 HITS.47899042._001463.pool.root.1
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc       531 Dec 14 16:25 boinc_task_state.xml
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc      1013 Dec 14 16:26 memory_monitor_summary.json
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc   1516240 Dec 14 16:26 agis_ddmendpoints.agis.ALL.json
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc    464017 Dec 14 16:26 log.47899042._001463.job.log.tgz.1
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc      7775 Dec 14 16:27 heartbeat.json
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc        95 Dec 14 16:28 pilot_heartbeat.json
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc      8192 Dec 14 16:28 boinc_mmap_file
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc        28 Dec 14 16:28 wrapper_checkpoint.txt
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc      5143 Dec 14 16:28 pilotlog.txt
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc   2025895 Dec 14 16:28 log.47899042._001463.job.log.1
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc       357 Dec 14 16:28 output.list
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc       620 Dec 14 16:28 runtime_log
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc   2508800 Dec 14 16:28 result.tar.gz
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc      8833 Dec 14 16:28 runtime_log.err
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc       657 Dec 14 16:28 M68LDmnCmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgIUKDmh0PAun.diag
[2025-12-14 16:28:49] -rw-r--r--. 1 boinc boinc     21037 Dec 14 16:28 stderr.txt
[2025-12-14 16:28:49] HITS file was successfully produced:
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc 183744332 Dec 14 16:24 shared/HITS.pool.root.1
[2025-12-14 16:28:49]  *** Contents of shared directory: ***
[2025-12-14 16:28:49] total 379224
[2025-12-14 16:28:49] -rw-r--r--. 2 boinc boinc 201453713 Dec 14 12:10 ATLAS.root_0
[2025-12-14 16:28:49] -rw-r--r--. 2 boinc boinc     15847 Dec 14 12:10 start_atlas.sh
[2025-12-14 16:28:49] -rw-r--r--. 2 boinc boinc    592388 Dec 14 12:10 input.tar.gz
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc 183744332 Dec 14 16:24 HITS.pool.root.1
[2025-12-14 16:28:49] -rw-------. 1 boinc boinc   2508800 Dec 14 16:28 result.tar.gz
16:28:51 (6824): run_atlas exited; CPU time 56327.383636
16:28:51 (6824): called boinc_finish(0)

</stderr_txt>
]]>

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