Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:43 (125355): wrapper (7.7.26015): starting
20:04:43 (125355): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 20:04:43] Arguments: --nthreads 12
[2025-12-13 20:04:43] Threads: 12
[2025-12-13 20:04:43] Checking for CVMFS
[2025-12-13 20:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:04:43] 2.11.5.0 4071029 18588 365300 153982 1 374 44837924 45568001 15790 130560 0 127118428 99.777 87797709 21063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 20:04:43] CVMFS is ok
[2025-12-13 20:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:04:43] Further information can be found at the LHC@home message board.
[2025-12-13 20:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:04:43] Checking for apptainer binary...
[2025-12-13 20:04:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:04:43] Running /usr/bin/apptainer --version
[2025-12-13 20:04:43] apptainer version 1.4.1-1.el9
[2025-12-13 20:04:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:04:44] wns0029.triumf.lcg
[2025-12-13 20:04:44] apptainer works
[2025-12-13 20:04:44] Set ATHENA_PROC_NUMBER=12
[2025-12-13 20:04:44] Set ATHENA_CORE_NUMBER=12
[2025-12-13 20:04:44] Starting ATLAS job with PandaID=6929526463
[2025-12-13 20:04:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 20:10:16]  *** The last 200 lines of the pilot log: ***
[2025-12-13 20:10:16] 2025-12-14 04:09:12,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:10:16] 2025-12-14 04:09:12,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | WARNING  | wrong length of table data, x=[1765685186.0], y=[2015.0] (must be same and length>=4)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | could have reported an average CPU frequency of 2613 MHz (4 samples)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | ..............................
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . Timing measurements:
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . get job = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . initial setup = 4 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . payload setup = 16 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . stage-in = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . payload execution = 50 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . stage-out = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . log creation = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | ..............................
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 20:10:16] 2025-12-14 04:09:12,291 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929526463/pilotlog.txt
[2025-12-13 20:10:16] 2025-12-14 04:09:12,302 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 20:10:16] - Log from pilotlog.txt -
[2025-12-13 20:10:16] 2025-12-14 04:09:12,275 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929526463/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,288 | INFO     | extracted standard info from prmon json
[2025-12-13 20:10:16] 2025-12-14 04:09:12,288 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:10:16] 2025-12-14 04:09:12,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:10:16] 2025-12-14 04:09:12,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:10:16] 2025-12-14 04:09:12,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | WARNING  | wrong length of table data, x=[1765685186.0], y=[2015.0] (must be same and length>=4)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | could have reported an average CPU frequency of 2613 MHz (4 samples)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | ..............................
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . Timing measurements:
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . get job = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . initial setup = 4 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . payload setup = 16 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . stage-in = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . payload execution = 50 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . stage-out = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . log creation = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | ..............................
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 20:10:16] 2025-12-14 04:09:12,291 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929526463/pilotlog.txt
[2025-12-13 20:10:16] 2025-12-14 04:09:12,303 | WARNING  | 
[2025-12-13 20:10:16] [begin log extracts]
[2025-12-13 20:10:16] - Log from pilotlog.txt -
[2025-12-13 20:10:16] 2025-12-14 04:09:12,275 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929526463/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,288 | INFO     | extracted standard info from prmon json
[2025-12-13 20:10:16] 2025-12-14 04:09:12,288 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:10:16] 2025-12-14 04:09:12,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:10:16] 2025-12-14 04:09:12,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:10:16] 2025-12-14 04:09:12,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | WARNING  | wrong length of table data, x=[1765685186.0], y=[2015.0] (must be same and length>=4)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | could have reported an average CPU frequency of 2613 MHz (4 samples)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | ..............................
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . Timing measurements:
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . get job = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . initial setup = 4 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . payload setup = 16 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . stage-in = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . payload execution = 50 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . stage-out = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | . log creation = 0 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | ..............................
[2025-12-13 20:10:16] 2025-12-14 04:09:12,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 20:10:16] 2025-12-14 04:09:12,291 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929526463/pilotlog.txt
[2025-12-13 20:10:16] [end log extracts]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,303 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,304 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 20:10:16] 2025-12-14 04:09:12,563 | INFO     | time since job start (243s) is within the limit (174528.0s)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,628 | INFO     | 
[2025-12-13 20:10:16] 2025-12-14 04:09:12,628 | INFO     | job summary report
[2025-12-13 20:10:16] 2025-12-14 04:09:12,628 | INFO     | --------------------------------------------------
[2025-12-13 20:10:16] 2025-12-14 04:09:12,628 | INFO     | PanDA job id: 6929526463
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | task id: 47899042
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 20:06:49,953 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | pilot state: failed 
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | transexitcode: 65
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | exeerrorcode: 65
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | exitcode: 65
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | cpuconsumptiontime: 17 s
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | nevents: 0
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | neventsw: 0
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | pid: 135747
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | pgrp: 135747
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | corecount: 12
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | event service: False
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | sizes: {0: 2283759, 1: 2283958, 12: 2284248, 22: 2284248, 71: 2311901, 74: 2311901, 202: 2312195}
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | --------------------------------------------------
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | 
[2025-12-13 20:10:16] 2025-12-14 04:09:12,629 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 20:10:16] 2025-12-14 04:09:12,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | job 6929526463 has completed (purged errors)
[2025-12-13 20:10:16] 2025-12-14 04:09:12,751 | INFO     | overall cleanup function is called
[2025-12-13 20:10:16] 2025-12-14 04:09:13,758 | INFO     | --- collectZombieJob: --- 10, [135747]
[2025-12-13 20:10:16] 2025-12-14 04:09:13,758 | INFO     | zombie collector waiting for pid 135747
[2025-12-13 20:10:16] 2025-12-14 04:09:13,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 20:10:16] 2025-12-14 04:09:13,758 | INFO     | collected zombie processes
[2025-12-13 20:10:16] 2025-12-14 04:09:13,758 | INFO     | will attempt to kill all subprocesses of pid=135747
[2025-12-13 20:10:16] 2025-12-14 04:09:14,088 | INFO     | process IDs to be killed: [135747] (in reverse order)
[2025-12-13 20:10:16] 2025-12-14 04:09:14,156 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 20:10:16] 2025-12-14 04:09:14,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 20:10:16] 2025-12-14 04:09:14,169 | INFO     | did not find any defunct processes belonging to 135747
[2025-12-13 20:10:16] 2025-12-14 04:09:14,186 | INFO     | did not find any defunct processes belonging to 135747
[2025-12-13 20:10:16] 2025-12-14 04:09:14,186 | INFO     | ready for new job
[2025-12-13 20:10:16] 2025-12-14 04:09:14,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 20:10:16] 2025-12-14 04:09:14,199 | INFO     | ***************************************
[2025-12-13 20:10:16] 2025-12-14 04:09:14,199 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 20:10:16] 2025-12-14 04:09:14,199 | INFO     | ***************************************
[2025-12-13 20:10:16] 2025-12-14 04:09:14,199 | INFO     | 
[2025-12-13 20:10:16] 2025-12-14 04:09:14,201 | INFO     | architecture information:
[2025-12-13 20:10:16] 2025-12-14 04:09:14,202 | INFO     | executing command: cat /etc/os-release
[2025-12-13 20:10:16] 2025-12-14 04:09:14,267 | INFO     | cat /etc/os-release:
[2025-12-13 20:10:16] NAME="CentOS Linux"
[2025-12-13 20:10:16] VERSION="7 (Core)"
[2025-12-13 20:10:16] ID="centos"
[2025-12-13 20:10:16] ID_LIKE="rhel fedora"
[2025-12-13 20:10:16] VERSION_ID="7"
[2025-12-13 20:10:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 20:10:16] ANSI_COLOR="0;31"
[2025-12-13 20:10:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 20:10:16] HOME_URL="https://www.centos.org/"
[2025-12-13 20:10:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 20:10:16] 
[2025-12-13 20:10:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 20:10:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 20:10:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 20:10:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 20:10:16] 
[2025-12-13 20:10:16] 2025-12-14 04:09:14,267 | INFO     | ***************************************
[2025-12-13 20:10:16] 2025-12-14 04:09:14,771 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 20:10:16] 2025-12-14 04:09:14,826 | INFO     | sufficient remaining disk space (2065341349888 B)
[2025-12-13 20:10:16] 2025-12-14 04:09:14,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 20:10:16] 2025-12-14 04:09:14,827 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 20:10:16] 2025-12-14 04:09:14,827 | INFO     | update_server=False
[2025-12-13 20:10:16] 2025-12-14 04:09:14,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 20:10:16] 2025-12-14 04:09:14,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 20:10:16] 2025-12-14 04:09:15,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:10:16] 2025-12-14 04:09:15,473 | INFO     | aborting loop
[2025-12-13 20:10:16] 2025-12-14 04:09:15,645 | INFO     | all data control threads have been joined
[2025-12-13 20:10:16] 2025-12-14 04:09:15,833 | INFO     | [job] retrieve thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:15,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:15,989 | INFO     | [payload] validate_post thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,104 | INFO     | all payload control threads have been joined
[2025-12-13 20:10:16] 2025-12-14 04:09:16,178 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,428 | INFO     | all job control threads have been joined
[2025-12-13 20:10:16] 2025-12-14 04:09:16,479 | INFO     | [job] job monitor thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 20:10:16] 2025-12-14 04:09:16,597 | INFO     | [job] validate thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,651 | INFO     | [data] control thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,823 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,852 | INFO     | [payload] failed_post thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,885 | INFO     | [data] copytool_in thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:16,901 | INFO     | [data] copytool_out thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:17,110 | INFO     | [payload] control thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:17,262 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:17,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:10:16] 2025-12-14 04:09:17,434 | INFO     | [job] control thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:18,393 | INFO     | [job] queue monitor thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:20,510 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 20:10:16] 2025-12-14 04:09:46,580 | INFO     | PID=129051 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 20:10:16] 2025-12-14 04:09:46,580 | INFO     | .. there are 28 such processes running
[2025-12-13 20:10:16] 2025-12-14 04:09:46,581 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 20:10:16] 2025-12-14 04:09:46,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 20:10:16] 2025-12-14 04:09:46,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 20:10:16] 2025-12-14 04:10:09,319 | INFO     | [monitor] cgroup control has ended
[2025-12-13 20:10:16] 2025-12-14 04:10:10,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006199404352)>', '<ExcThread(monitor, started 140005666191104)>']
[2025-12-13 20:10:16] 2025-12-14 04:10:11,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 20:10:16] 2025-12-14 04:10:11,743 | INFO     | [monitor] control thread has ended
[2025-12-13 20:10:16] 2025-12-14 04:10:16,020 | INFO     | all workflow threads have been joined
[2025-12-13 20:10:16] 2025-12-14 04:10:16,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 20:10:16] 2025-12-14 04:10:16,021 | INFO     | traces error code: 0
[2025-12-13 20:10:16] 2025-12-14 04:10:16,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 20:10:16] 2025-12-14 04:10:16,379 [wrapper] ==== pilot stdout END ====
[2025-12-13 20:10:16] 2025-12-14 04:10:16,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 20:10:16] 2025-12-14 04:10:16,383 [wrapper] pilotpid: 129051
[2025-12-13 20:10:16] 2025-12-14 04:10:16,384 [wrapper] Pilot exit status: 0
[2025-12-13 20:10:16] 2025-12-14 04:10:16,428 [wrapper] pandaids: 6929526463
[2025-12-13 20:10:16] 2025-12-14 04:10:16,625 [wrapper] cleanup supervisor_pilot  129057 129052
[2025-12-13 20:10:16] 2025-12-14 04:10:16,627 [wrapper] Test setup, not cleaning
[2025-12-13 20:10:16] 2025-12-14 04:10:16,630 [wrapper] apfmon messages muted
[2025-12-13 20:10:16] 2025-12-14 04:10:16,631 [wrapper] ==== wrapper stdout END ====
[2025-12-13 20:10:16] 2025-12-14 04:10:16,633 [wrapper] ==== wrapper stderr END ====
[2025-12-13 20:10:16]  *** Error codes and diagnostics ***
[2025-12-13 20:10:16]     "exeErrorCode": 65,
[2025-12-13 20:10:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 20:10:16]     "pilotErrorCode": 1305,
[2025-12-13 20:10:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 20:10:16]  *** Listing of results directory ***
[2025-12-13 20:10:16] total 194620
[2025-12-13 20:10:16] -rwx------. 1 boinc boinc     36322 Dec 13 13:19 runpilot2-wrapper.sh
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc    579449 Dec 13 13:19 pilot3.tar.gz
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc      5112 Dec 13 13:19 queuedata.json
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc       100 Dec 13 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 20:10:16] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 20:04 run_atlas
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc       105 Dec 13 20:04 job.xml
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc      6595 Dec 13 20:04 init_data.xml
[2025-12-13 20:10:16] -rw-r--r--. 2 boinc boinc 195141923 Dec 13 20:04 EVNT.47899040._000063.pool.root.1
[2025-12-13 20:10:16] -rw-r--r--. 2 boinc boinc     15847 Dec 13 20:04 start_atlas.sh
[2025-12-13 20:10:16] drwxrwx--x. 2 boinc boinc      4096 Dec 13 20:04 shared
[2025-12-13 20:10:16] -rw-r--r--. 2 boinc boinc    592380 Dec 13 20:04 input.tar.gz
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc         0 Dec 13 20:04 boinc_lockfile
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc      2491 Dec 13 20:04 pandaJob.out
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc    991736 Dec 13 20:05 agis_schedconf.cvmfs.json
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc   1516240 Dec 13 20:05 agis_ddmendpoints.agis.ALL.json
[2025-12-13 20:10:16] drwx------. 5 boinc boinc      4096 Dec 13 20:05 pilot3
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc       523 Dec 13 20:06 boinc_task_state.xml
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc       948 Dec 13 20:06 memory_monitor_summary.json
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc     21369 Dec 13 20:07 log.47899042._001052.job.log.tgz.1
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc        95 Dec 13 20:09 pilot_heartbeat.json
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc      8398 Dec 13 20:09 heartbeat.json
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc      8192 Dec 13 20:10 boinc_mmap_file
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc        22 Dec 13 20:10 wrapper_checkpoint.txt
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc      4822 Dec 13 20:10 pilotlog.txt
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc     92081 Dec 13 20:10 log.47899042._001052.job.log.1
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc       188 Dec 13 20:10 output.list
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc       620 Dec 13 20:10 runtime_log
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc    133120 Dec 13 20:10 result.tar.gz
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc      8636 Dec 13 20:10 runtime_log.err
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc       646 Dec 13 20:10 DKTKDmUCmo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpFUKDmMRTVhn.diag
[2025-12-13 20:10:16] -rw-r--r--. 1 boinc boinc     21788 Dec 13 20:10 stderr.txt
[2025-12-13 20:10:16] No HITS result produced
[2025-12-13 20:10:16]  *** Contents of shared directory: ***
[2025-12-13 20:10:16] total 191304
[2025-12-13 20:10:16] -rw-r--r--. 2 boinc boinc 195141923 Dec 13 20:04 ATLAS.root_0
[2025-12-13 20:10:16] -rw-r--r--. 2 boinc boinc     15847 Dec 13 20:04 start_atlas.sh
[2025-12-13 20:10:16] -rw-r--r--. 2 boinc boinc    592380 Dec 13 20:04 input.tar.gz
[2025-12-13 20:10:16] -rw-------. 1 boinc boinc    133120 Dec 13 20:10 result.tar.gz
20:10:18 (125355): run_atlas exited; CPU time 26.357293
20:10:18 (125355): called boinc_finish(0)

</stderr_txt>
]]>

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