Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:46:44 (1884349): wrapper (7.7.26015): starting
18:46:44 (1884349): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 18:46:44] Arguments: --nthreads 8
[2025-12-13 18:46:44] Threads: 8
[2025-12-13 18:46:44] Checking for CVMFS
[2025-12-13 18:46:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 18:46:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 18:46:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 18:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 18:46:48] 2.11.3.0 700522 18665 233644 153980 3 207 38609259 45568000 11303 130560 0 64156724 99.732 53822259 20038 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 18:46:48] CVMFS is ok
[2025-12-13 18:46:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 18:46:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 18:46:48] Further information can be found at the LHC@home message board.
[2025-12-13 18:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 18:46:48] Checking for apptainer binary...
[2025-12-13 18:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 18:46:48] Running /usr/bin/apptainer --version
[2025-12-13 18:46:48] apptainer version 1.4.1-1.el9
[2025-12-13 18:46:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 18:46:50] wns0006.triumf.lcg
[2025-12-13 18:46:50] apptainer works
[2025-12-13 18:46:50] Set ATHENA_PROC_NUMBER=8
[2025-12-13 18:46:50] Set ATHENA_CORE_NUMBER=8
[2025-12-13 18:46:51] Starting ATLAS job with PandaID=6929308234
[2025-12-13 18:46:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:57:14]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | wrong length of table data, x=[1765680692.0, 1765680753.0, 1765680814.0], y=[13880.0, 52737.0, 484234.0] (must be same and length>=4)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | ..............................
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . Timing measurements:
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . get job = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . initial setup = 7 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . payload setup = 76 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . stage-in = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . payload execution = 213 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . stage-out = 1 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . log creation = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | ..............................
[2025-12-13 18:57:14] 2025-12-14 02:56:39,172 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 18:57:14] 2025-12-14 02:56:39,172 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929308234/pilotlog.txt
[2025-12-13 18:57:14] 2025-12-14 02:56:39,193 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 18:57:14] - Log from pilotlog.txt -
[2025-12-13 18:57:14] 2025-12-14 02:56:39,169 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929308234/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,169 | INFO     | extracted standard info from prmon json
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | wrong length of table data, x=[1765680692.0, 1765680753.0, 1765680814.0], y=[13880.0, 52737.0, 484234.0] (must be same and length>=4)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | ..............................
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . Timing measurements:
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . get job = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . initial setup = 7 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . payload setup = 76 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . stage-in = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . payload execution = 213 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . stage-out = 1 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . log creation = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | ..............................
[2025-12-13 18:57:14] 2025-12-14 02:56:39,172 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 18:57:14] 2025-12-14 02:56:39,172 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929308234/pilotlog.txt
[2025-12-13 18:57:14] 2025-12-14 02:56:39,194 | WARNING  | 
[2025-12-13 18:57:14] [begin log extracts]
[2025-12-13 18:57:14] - Log from pilotlog.txt -
[2025-12-13 18:57:14] 2025-12-14 02:56:39,169 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929308234/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,169 | INFO     | extracted standard info from prmon json
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:57:14] 2025-12-14 02:56:39,170 | WARNING  | wrong length of table data, x=[1765680692.0, 1765680753.0, 1765680814.0], y=[13880.0, 52737.0, 484234.0] (must be same and length>=4)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | ..............................
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . Timing measurements:
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . get job = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . initial setup = 7 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . payload setup = 76 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . stage-in = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . payload execution = 213 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . stage-out = 1 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | . log creation = 0 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,171 | INFO     | ..............................
[2025-12-13 18:57:14] 2025-12-14 02:56:39,172 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 18:57:14] 2025-12-14 02:56:39,172 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929308234/pilotlog.txt
[2025-12-13 18:57:14] [end log extracts]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,194 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,195 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 18:57:14] 2025-12-14 02:56:39,295 | INFO     | time since job start (515s) is within the limit (174528.0s)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,633 | INFO     | 
[2025-12-13 18:57:14] 2025-12-14 02:56:39,633 | INFO     | job summary report
[2025-12-13 18:57:14] 2025-12-14 02:56:39,633 | INFO     | --------------------------------------------------
[2025-12-13 18:57:14] 2025-12-14 02:56:39,633 | INFO     | PanDA job id: 6929308234
[2025-12-13 18:57:14] 2025-12-14 02:56:39,633 | INFO     | task id: 47898836
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 18:54:10,686 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | pilot state: failed 
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | transexitcode: 65
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | exeerrorcode: 65
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | exitcode: 65
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | cpuconsumptiontime: 20 s
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | nevents: 0
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | neventsw: 0
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | pid: 1895912
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | pgrp: 1895912
[2025-12-13 18:57:14] 2025-12-14 02:56:39,634 | INFO     | corecount: 8
[2025-12-13 18:57:14] 2025-12-14 02:56:39,635 | INFO     | event service: False
[2025-12-13 18:57:14] 2025-12-14 02:56:39,635 | INFO     | sizes: {0: 2283177, 1: 2283775, 2: 2284058, 14: 2284058, 25: 2284086, 33: 2284376, 36: 2284560, 293: 2307918, 295: 2312210, 297: 2312266, 429: 2312460}
[2025-12-13 18:57:14] 2025-12-14 02:56:39,635 | INFO     | --------------------------------------------------
[2025-12-13 18:57:14] 2025-12-14 02:56:39,635 | INFO     | 
[2025-12-13 18:57:14] 2025-12-14 02:56:39,635 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 18:57:14] 2025-12-14 02:56:39,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | job 6929308234 has completed (purged errors)
[2025-12-13 18:57:14] 2025-12-14 02:56:39,762 | INFO     | overall cleanup function is called
[2025-12-13 18:57:14] 2025-12-14 02:56:40,769 | INFO     | --- collectZombieJob: --- 10, [1895912]
[2025-12-13 18:57:14] 2025-12-14 02:56:40,769 | INFO     | zombie collector waiting for pid 1895912
[2025-12-13 18:57:14] 2025-12-14 02:56:40,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:57:14] 2025-12-14 02:56:40,769 | INFO     | collected zombie processes
[2025-12-13 18:57:14] 2025-12-14 02:56:40,769 | INFO     | will attempt to kill all subprocesses of pid=1895912
[2025-12-13 18:57:14] 2025-12-14 02:56:41,156 | INFO     | process IDs to be killed: [1895912] (in reverse order)
[2025-12-13 18:57:14] 2025-12-14 02:56:41,602 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:57:14] 2025-12-14 02:56:41,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:57:14] 2025-12-14 02:56:41,614 | INFO     | did not find any defunct processes belonging to 1895912
[2025-12-13 18:57:14] 2025-12-14 02:56:41,620 | INFO     | did not find any defunct processes belonging to 1895912
[2025-12-13 18:57:14] 2025-12-14 02:56:41,620 | INFO     | ready for new job
[2025-12-13 18:57:14] 2025-12-14 02:56:41,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:57:14] 2025-12-14 02:56:41,621 | INFO     | ***************************************
[2025-12-13 18:57:14] 2025-12-14 02:56:41,621 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:57:14] 2025-12-14 02:56:41,621 | INFO     | ***************************************
[2025-12-13 18:57:14] 2025-12-14 02:56:41,621 | INFO     | 
[2025-12-13 18:57:14] 2025-12-14 02:56:41,623 | INFO     | architecture information:
[2025-12-13 18:57:14] 2025-12-14 02:56:41,626 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:57:14] 2025-12-14 02:56:41,636 | INFO     | cat /etc/os-release:
[2025-12-13 18:57:14] NAME="CentOS Linux"
[2025-12-13 18:57:14] VERSION="7 (Core)"
[2025-12-13 18:57:14] ID="centos"
[2025-12-13 18:57:14] ID_LIKE="rhel fedora"
[2025-12-13 18:57:14] VERSION_ID="7"
[2025-12-13 18:57:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:57:14] ANSI_COLOR="0;31"
[2025-12-13 18:57:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:57:14] HOME_URL="https://www.centos.org/"
[2025-12-13 18:57:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:57:14] 
[2025-12-13 18:57:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:57:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:57:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:57:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:57:14] 
[2025-12-13 18:57:14] 2025-12-14 02:56:41,636 | INFO     | ***************************************
[2025-12-13 18:57:14] 2025-12-14 02:56:42,139 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 18:57:14] 2025-12-14 02:56:42,187 | INFO     | sufficient remaining disk space (1448707358720 B)
[2025-12-13 18:57:14] 2025-12-14 02:56:42,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:57:14] 2025-12-14 02:56:42,188 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:57:14] 2025-12-14 02:56:42,188 | INFO     | update_server=False
[2025-12-13 18:57:14] 2025-12-14 02:56:42,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:57:14] 2025-12-14 02:56:42,273 | INFO     | all data control threads have been joined
[2025-12-13 18:57:14] 2025-12-14 02:56:42,721 | INFO     | all payload control threads have been joined
[2025-12-13 18:57:14] 2025-12-14 02:56:42,780 | INFO     | all job control threads have been joined
[2025-12-13 18:57:14] 2025-12-14 02:56:42,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:57:14] 2025-12-14 02:56:42,846 | INFO     | aborting loop
[2025-12-13 18:57:14] 2025-12-14 02:56:43,194 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:43,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:43,279 | INFO     | [data] control thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:43,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:57:14] 2025-12-14 02:56:43,594 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:43,727 | INFO     | [payload] control thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:43,786 | INFO     | [job] control thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:43,852 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:44,012 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:44,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:57:14] 2025-12-14 02:56:44,204 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:44,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:57:14] 2025-12-14 02:56:44,319 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:44,391 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:44,418 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:44,684 | INFO     | [job] validate thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:45,285 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:45,491 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:56:48,107 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:57:14] 2025-12-14 02:57:03,808 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:57:14] 2025-12-14 02:57:03,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101919344448)>', '<ExcThread(monitor, started 140101145319168)>']
[2025-12-13 18:57:14] 2025-12-14 02:57:08,914 | INFO     | all workflow threads have been joined
[2025-12-13 18:57:14] 2025-12-14 02:57:08,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:57:14] 2025-12-14 02:57:08,915 | INFO     | traces error code: 0
[2025-12-13 18:57:14] 2025-12-14 02:57:08,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:57:14] 2025-12-14 02:57:13,345 | INFO     | PID=1888527 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 18:57:14] 2025-12-14 02:57:13,346 | INFO     | .. there are 33 such processes running
[2025-12-13 18:57:14] 2025-12-14 02:57:13,346 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:57:14] 2025-12-14 02:57:13,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:57:14] 2025-12-14 02:57:13,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:57:14] 2025-12-14 02:57:13,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:57:14] 2025-12-14 02:57:13,347 | CRITICAL | thread 'MainThread' is not alive
[2025-12-13 18:57:14] 2025-12-14 02:57:13,347 | INFO     | [monitor] control thread has ended
[2025-12-13 18:57:14] 2025-12-14 02:57:13,439 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:57:14] 2025-12-14 02:57:13,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:57:14] 2025-12-14 02:57:13,449 [wrapper] pilotpid: 1888527
[2025-12-13 18:57:14] 2025-12-14 02:57:13,453 [wrapper] Pilot exit status: 0
[2025-12-13 18:57:14] 2025-12-14 02:57:13,472 [wrapper] pandaids: 6929308234
[2025-12-13 18:57:14] 2025-12-14 02:57:13,516 [wrapper] cleanup supervisor_pilot 1888533 1888528
[2025-12-13 18:57:14] 2025-12-14 02:57:13,519 [wrapper] Test setup, not cleaning
[2025-12-13 18:57:14] 2025-12-14 02:57:13,521 [wrapper] apfmon messages muted
[2025-12-13 18:57:14] 2025-12-14 02:57:13,522 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:57:14] 2025-12-14 02:57:13,524 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:57:14]  *** Error codes and diagnostics ***
[2025-12-13 18:57:14]     "exeErrorCode": 65,
[2025-12-13 18:57:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 18:57:14]     "pilotErrorCode": 1305,
[2025-12-13 18:57:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 18:57:14]  *** Listing of results directory ***
[2025-12-13 18:57:14] total 212696
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc    579449 Dec 13 03:35 pilot3.tar.gz
[2025-12-13 18:57:14] -rwx------. 1 boinc boinc     36322 Dec 13 03:37 runpilot2-wrapper.sh
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc      5112 Dec 13 03:41 queuedata.json
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc       100 Dec 13 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:57:14] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 18:46 run_atlas
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc       105 Dec 13 18:46 job.xml
[2025-12-13 18:57:14] -rw-r--r--. 2 boinc boinc 213605974 Dec 13 18:46 EVNT.47898833._000078.pool.root.1
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc      6446 Dec 13 18:46 init_data.xml
[2025-12-13 18:57:14] -rw-r--r--. 2 boinc boinc     15847 Dec 13 18:46 start_atlas.sh
[2025-12-13 18:57:14] drwxrwx--x. 2 boinc boinc      4096 Dec 13 18:46 shared
[2025-12-13 18:57:14] -rw-r--r--. 2 boinc boinc    592401 Dec 13 18:46 input.tar.gz
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc         0 Dec 13 18:46 boinc_lockfile
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc      2548 Dec 13 18:46 pandaJob.out
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc    991736 Dec 13 18:47 agis_schedconf.cvmfs.json
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc   1516240 Dec 13 18:47 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:57:14] drwx------. 5 boinc boinc      4096 Dec 13 18:48 pilot3
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc       524 Dec 13 18:54 boinc_task_state.xml
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc       986 Dec 13 18:54 memory_monitor_summary.json
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc     25012 Dec 13 18:54 log.47898836._001432.job.log.tgz.1
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc      8424 Dec 13 18:56 heartbeat.json
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc      8192 Dec 13 18:57 boinc_mmap_file
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc        23 Dec 13 18:57 wrapper_checkpoint.txt
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc       893 Dec 13 18:57 pilotlog.txt
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc        95 Dec 13 18:57 pilot_heartbeat.json
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc    118013 Dec 13 18:57 log.47898836._001432.job.log.1
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc       188 Dec 13 18:57 output.list
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc       620 Dec 13 18:57 runtime_log
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc    163840 Dec 13 18:57 result.tar.gz
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc      8634 Dec 13 18:57 runtime_log.err
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc       646 Dec 13 18:57 BeMKDmh7co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbNTKDmTRXsRm.diag
[2025-12-13 18:57:14] -rw-r--r--. 1 boinc boinc     21984 Dec 13 18:57 stderr.txt
[2025-12-13 18:57:14] No HITS result produced
[2025-12-13 18:57:14]  *** Contents of shared directory: ***
[2025-12-13 18:57:14] total 209356
[2025-12-13 18:57:14] -rw-r--r--. 2 boinc boinc 213605974 Dec 13 18:46 ATLAS.root_0
[2025-12-13 18:57:14] -rw-r--r--. 2 boinc boinc     15847 Dec 13 18:46 start_atlas.sh
[2025-12-13 18:57:14] -rw-r--r--. 2 boinc boinc    592401 Dec 13 18:46 input.tar.gz
[2025-12-13 18:57:14] -rw-------. 1 boinc boinc    163840 Dec 13 18:57 result.tar.gz
18:57:16 (1884349): run_atlas exited; CPU time 39.241729
18:57:16 (1884349): called boinc_finish(0)

</stderr_txt>
]]>

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