Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:49 (129486): wrapper (7.7.26015): starting
08:43:49 (129486): wrapper: running run_atlas (--nthreads 3)
[2025-12-14 08:43:49] Arguments: --nthreads 3
[2025-12-14 08:43:49] Threads: 3
[2025-12-14 08:43:49] Checking for CVMFS
[2025-12-14 08:43:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 08:43:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 08:43:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 08:43:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 08:43:49] 2.9.2.0 3857183 1780 78104 153988 3 57 13247757 36864001 0 130560 0 1232002 99.989 64128 20527 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-14 08:43:49] CVMFS is ok
[2025-12-14 08:43:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 08:43:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 08:43:49] Further information can be found at the LHC@home message board.
[2025-12-14 08:43:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 08:43:49] Checking for apptainer binary...
[2025-12-14 08:43:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 08:43:49] Running /usr/bin/apptainer --version
[2025-12-14 08:43:49] apptainer version 1.4.1-1.1
[2025-12-14 08:43:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 08:43:49] thA325a
[2025-12-14 08:43:49] apptainer works
[2025-12-14 08:43:49] Set ATHENA_PROC_NUMBER=3
[2025-12-14 08:43:49] Set ATHENA_CORE_NUMBER=3
[2025-12-14 08:43:49] Starting ATLAS job with PandaID=6929265962
[2025-12-14 08:43:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 10:39:10]  *** The last 200 lines of the pilot log: ***
[2025-12-14 10:39:10] 2025-12-14 09:38:39,558 | INFO     | did not find any defunct processes belonging to 139653
[2025-12-14 10:39:10] 2025-12-14 09:38:39,559 | INFO     | did not find any defunct processes belonging to 139653
[2025-12-14 10:39:10] 2025-12-14 09:38:39,559 | INFO     | ready for new job
[2025-12-14 10:39:10] 2025-12-14 09:38:39,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 10:39:10] 2025-12-14 09:38:39,560 | INFO     | ***************************************
[2025-12-14 10:39:10] 2025-12-14 09:38:39,560 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 10:39:10] 2025-12-14 09:38:39,560 | INFO     | ***************************************
[2025-12-14 10:39:10] 2025-12-14 09:38:39,560 | INFO     | 
[2025-12-14 10:39:10] 2025-12-14 09:38:39,560 | INFO     | architecture information:
[2025-12-14 10:39:10] 2025-12-14 09:38:39,561 | INFO     | executing command: cat /etc/os-release
[2025-12-14 10:39:10] 2025-12-14 09:38:39,569 | INFO     | cat /etc/os-release:
[2025-12-14 10:39:10] NAME="CentOS Linux"
[2025-12-14 10:39:10] VERSION="7 (Core)"
[2025-12-14 10:39:10] ID="centos"
[2025-12-14 10:39:10] ID_LIKE="rhel fedora"
[2025-12-14 10:39:10] VERSION_ID="7"
[2025-12-14 10:39:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 10:39:10] ANSI_COLOR="0;31"
[2025-12-14 10:39:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 10:39:10] HOME_URL="https://www.centos.org/"
[2025-12-14 10:39:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 10:39:10] 
[2025-12-14 10:39:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 10:39:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 10:39:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 10:39:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 10:39:10] 
[2025-12-14 10:39:10] 2025-12-14 09:38:39,569 | INFO     | ***************************************
[2025-12-14 10:39:10] 2025-12-14 09:38:40,072 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-14 10:39:10] 2025-12-14 09:38:40,085 | INFO     | sufficient remaining disk space (247384244224 B)
[2025-12-14 10:39:10] 2025-12-14 09:38:40,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 10:39:10] 2025-12-14 09:38:40,085 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 10:39:10] 2025-12-14 09:38:40,085 | INFO     | update_server=False
[2025-12-14 10:39:10] 2025-12-14 09:38:40,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 10:39:10] 2025-12-14 09:38:40,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:39:10] 2025-12-14 09:38:40,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 10:39:10] 2025-12-14 09:38:40,229 | INFO     | all data control threads have been joined
[2025-12-14 10:39:10] 2025-12-14 09:38:40,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:39:10] 2025-12-14 09:38:40,242 | INFO     | aborting loop
[2025-12-14 10:39:10] 2025-12-14 09:38:41,091 | INFO     | [job] queue monitor thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:41,091 | INFO     | [job] retrieve thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:41,156 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:41,170 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:41,234 | INFO     | [data] control thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:41,235 | INFO     | all job control threads have been joined
[2025-12-14 10:39:10] 2025-12-14 09:38:41,248 | INFO     | [job] job monitor thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:41,386 | INFO     | all payload control threads have been joined
[2025-12-14 10:39:10] 2025-12-14 09:38:41,387 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,018 | INFO     | [payload] validate_post thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,022 | INFO     | [data] copytool_in thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,092 | INFO     | [data] copytool_out thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,240 | INFO     | [job] control thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,392 | INFO     | [payload] control thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,472 | INFO     | [payload] failed_post thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:42,506 | INFO     | [job] validate thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:43,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 10:39:10] 2025-12-14 09:38:47,564 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:38:50,600 | INFO     | job.realtimelogging is not enabled
[2025-12-14 10:39:10] 2025-12-14 09:38:51,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 10:39:10] 2025-12-14 09:39:02,507 | INFO     | [monitor] cgroup control has ended
[2025-12-14 10:39:10] 2025-12-14 09:39:03,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538950793024)>', '<ExcThread(monitor, started 140538216957696)>']
[2025-12-14 10:39:10] 2025-12-14 09:39:08,893 | INFO     | all workflow threads have been joined
[2025-12-14 10:39:10] 2025-12-14 09:39:08,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 10:39:10] 2025-12-14 09:39:08,893 | INFO     | traces error code: 0
[2025-12-14 10:39:10] 2025-12-14 09:39:08,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 10:39:10] 2025-12-14 09:39:10,739 | INFO     | PID=133207 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 10:39:10] 2025-12-14 09:39:10,739 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 10:39:10] 2025-12-14 09:39:10,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 10:39:10] 2025-12-14 09:39:10,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 10:39:10] 2025-12-14 09:39:10,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 10:39:10] 2025-12-14 09:39:10,739 | INFO     | [monitor] control thread has ended
[2025-12-14 10:39:10] 2025-12-14 09:39:10,789 [wrapper] ==== pilot stdout END ====
[2025-12-14 10:39:10] 2025-12-14 09:39:10,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 10:39:10] 2025-12-14 09:39:10,794 [wrapper] pilotpid: 133207
[2025-12-14 10:39:10] 2025-12-14 09:39:10,796 [wrapper] Pilot exit status: 0
[2025-12-14 10:39:10] 2025-12-14 09:39:10,803 [wrapper] pandaids: 6929265962
[2025-12-14 10:39:10] 2025-12-14 09:39:10,818 [wrapper] cleanup supervisor_pilot  154107 133208
[2025-12-14 10:39:10] 2025-12-14 09:39:10,821 [wrapper] Test setup, not cleaning
[2025-12-14 10:39:10] 2025-12-14 09:39:10,823 [wrapper] apfmon messages muted
[2025-12-14 10:39:10] 2025-12-14 09:39:10,825 [wrapper] ==== wrapper stdout END ====
[2025-12-14 10:39:10] 2025-12-14 09:39:10,828 [wrapper] ==== wrapper stderr END ====
[2025-12-14 10:39:10]  *** Error codes and diagnostics ***
[2025-12-14 10:39:10]     "exeErrorCode": 0,
[2025-12-14 10:39:10]     "exeErrorDiag": "",
[2025-12-14 10:39:10]     "pilotErrorCode": 0,
[2025-12-14 10:39:10]     "pilotErrorDiag": "",
[2025-12-14 10:39:10]  *** Listing of results directory ***
[2025-12-14 10:39:10] total 437676
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc    579449 Dec 13 11:01 pilot3.tar.gz
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc      5112 Dec 13 11:02 queuedata.json
[2025-12-14 10:39:10] -rwx------ 1 boinc boinc     36322 Dec 13 11:02 runpilot2-wrapper.sh
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc       100 Dec 14 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 10:39:10] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 08:43 run_atlas
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc       105 Dec 14 08:43 job.xml
[2025-12-14 10:39:10] -rw-r--r-- 2 boinc boinc 223572232 Dec 14 08:43 EVNT.47898761._000116.pool.root.1
[2025-12-14 10:39:10] -rw-r--r-- 2 boinc boinc    592390 Dec 14 08:43 input.tar.gz
[2025-12-14 10:39:10] -rw-r--r-- 2 boinc boinc     15847 Dec 14 08:43 start_atlas.sh
[2025-12-14 10:39:10] drwxrwx--x 2 boinc boinc      4096 Dec 14 08:43 shared
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc         0 Dec 14 08:43 boinc_setup_complete
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc      6440 Dec 14 08:43 init_data.xml
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc         0 Dec 14 08:43 boinc_lockfile
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc      2504 Dec 14 08:43 pandaJob.out
[2025-12-14 10:39:10] -rw------- 1 boinc boinc    991728 Dec 14 08:43 agis_schedconf.cvmfs.json
[2025-12-14 10:39:10] -rw------- 1 boinc boinc   1516240 Dec 14 08:43 agis_ddmendpoints.agis.ALL.json
[2025-12-14 10:39:10] drwx------ 5 boinc boinc      4096 Dec 14 08:43 pilot3
[2025-12-14 10:39:10] -rw------- 1 boinc boinc 218153496 Dec 14 10:38 HITS.47898763._002264.pool.root.1
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc       529 Dec 14 10:38 boinc_task_state.xml
[2025-12-14 10:39:10] -rw------- 1 boinc boinc      1022 Dec 14 10:38 memory_monitor_summary.json
[2025-12-14 10:39:10] -rw------- 1 boinc boinc        95 Dec 14 10:38 pilot_heartbeat.json
[2025-12-14 10:39:10] -rw------- 1 boinc boinc    284081 Dec 14 10:38 log.47898763._002264.job.log.tgz.1
[2025-12-14 10:39:10] -rw------- 1 boinc boinc      7758 Dec 14 10:38 heartbeat.json
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc      8192 Dec 14 10:38 boinc_mmap_file
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc        27 Dec 14 10:38 wrapper_checkpoint.txt
[2025-12-14 10:39:10] -rw------- 1 boinc boinc       746 Dec 14 10:39 pilotlog.txt
[2025-12-14 10:39:10] -rw------- 1 boinc boinc    991646 Dec 14 10:39 log.47898763._002264.job.log.1
[2025-12-14 10:39:10] -rw------- 1 boinc boinc       357 Dec 14 10:39 output.list
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc       620 Dec 14 10:39 runtime_log
[2025-12-14 10:39:10] -rw------- 1 boinc boinc   1290240 Dec 14 10:39 result.tar.gz
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc      8902 Dec 14 10:39 runtime_log.err
[2025-12-14 10:39:10] -rw------- 1 boinc boinc       660 Dec 14 10:39 iuRLDmpdbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmonSKDmInmT5n.diag
[2025-12-14 10:39:10] -rw-r--r-- 1 boinc boinc      9845 Dec 14 10:39 stderr.txt
[2025-12-14 10:39:10] HITS file was successfully produced:
[2025-12-14 10:39:10] -rw------- 1 boinc boinc 218153496 Dec 14 10:38 shared/HITS.pool.root.1
[2025-12-14 10:39:10]  *** Contents of shared directory: ***
[2025-12-14 10:39:10] total 433244
[2025-12-14 10:39:10] -rw-r--r-- 2 boinc boinc 223572232 Dec 14 08:43 ATLAS.root_0
[2025-12-14 10:39:10] -rw-r--r-- 2 boinc boinc    592390 Dec 14 08:43 input.tar.gz
[2025-12-14 10:39:10] -rw-r--r-- 2 boinc boinc     15847 Dec 14 08:43 start_atlas.sh
[2025-12-14 10:39:10] -rw------- 1 boinc boinc 218153496 Dec 14 10:38 HITS.pool.root.1
[2025-12-14 10:39:10] -rw------- 1 boinc boinc   1290240 Dec 14 10:39 result.tar.gz
10:39:12 (129486): run_atlas exited; CPU time 19944.493732
10:39:12 (129486): called boinc_finish(0)

</stderr_txt>
]]>

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