Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:10:31 (3884832): wrapper (7.7.26015): starting
10:10:31 (3884832): wrapper: running run_atlas (--nthreads 4)
[2025-12-15 10:10:31] Arguments: --nthreads 4
[2025-12-15 10:10:31] Threads: 4
[2025-12-15 10:10:31] Checking for CVMFS
[2025-12-15 10:10:31] No cvmfs_config command found, will try listing directly
[2025-12-15 10:10:31] CVMFS is ok
[2025-12-15 10:10:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-15 10:10:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-15 10:10:31] Further information can be found at the LHC@home message board.
[2025-12-15 10:10:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-15 10:10:31] Checking for apptainer binary...
[2025-12-15 10:10:31] which: no apptainer in ((null))
[2025-12-15 10:10:31] apptainer is not installed, using version from CVMFS
[2025-12-15 10:10:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-15 10:10:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-15 10:10:31] apptainer works
[2025-12-15 10:10:31] Set ATHENA_PROC_NUMBER=4
[2025-12-15 10:10:31] Set ATHENA_CORE_NUMBER=4
[2025-12-15 10:10:31] Starting ATLAS job with PandaID=6929266254
[2025-12-15 10:10:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 14:19:26]  *** The last 200 lines of the pilot log: ***
[2025-12-15 14:19:26] 2025-12-15 13:16:03,882 | INFO     | time since job start (14722s) is within the limit (174528.0s)
[2025-12-15 14:19:26] 2025-12-15 13:16:05,446 | INFO     | monitor loop #1065: job 0:6929266254 is in state 'finished'
[2025-12-15 14:19:26] 2025-12-15 13:16:05,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 14:19:26] 2025-12-15 13:16:05,887 | INFO     | time since job start (14724s) is within the limit (174528.0s)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,415 | INFO     | PID=3890827 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 14:19:26] 2025-12-15 13:16:07,415 | INFO     | .. there are 4 such processes running
[2025-12-15 14:19:26] 2025-12-15 13:16:07,783 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 14:19:26] 2025-12-15 13:16:07,793 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2595.081140625
[2025-12-15 14:19:26] 2025-12-15 13:16:07,804 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6929266254/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,805 | INFO     | extracted standard info from prmon json
[2025-12-15 14:19:26] 2025-12-15 13:16:07,805 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 14:19:26] 2025-12-15 13:16:07,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 14:19:26] 2025-12-15 13:16:07,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-15 14:19:26] 2025-12-15 13:16:07,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-15 14:19:26] 2025-12-15 13:16:07,811 | INFO     | fitting pss+swap vs Time
[2025-12-15 14:19:26] 2025-12-15 13:16:07,811 | INFO     | sum of square deviations: 4340323240.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,813 | INFO     | sum of deviations: 12709914859.999973
[2025-12-15 14:19:26] 2025-12-15 13:16:07,813 | INFO     | mean x: 1765797188.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,813 | INFO     | mean y: 2348972.958506224
[2025-12-15 14:19:26] 2025-12-15 13:16:07,813 | INFO     | intersect: -5168494459.3171425
[2025-12-15 14:19:26] 2025-12-15 13:16:07,814 | INFO     | chi2: 1.3081950863630964
[2025-12-15 14:19:26] 2025-12-15 13:16:07,814 | INFO     | sum of square deviations: 4075741535.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,816 | INFO     | sum of deviations: 12326856820.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,816 | INFO     | mean x: 1765797035.5
[2025-12-15 14:19:26] 2025-12-15 13:16:07,816 | INFO     | mean y: 2348751.9830508474
[2025-12-15 14:19:26] 2025-12-15 13:16:07,816 | INFO     | intersect: -5338207572.030502
[2025-12-15 14:19:26] 2025-12-15 13:16:07,816 | INFO     | chi2: 1.3085851005718838
[2025-12-15 14:19:26] 2025-12-15 13:16:07,816 | INFO     | current chi2=1.3085851005718838 (change=-0.029813153470224844 %)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,817 | INFO     | right removable region: 235
[2025-12-15 14:19:26] 2025-12-15 13:16:07,817 | INFO     | sum of square deviations: 4075741535.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,819 | INFO     | sum of deviations: -15425523778.999998
[2025-12-15 14:19:26] 2025-12-15 13:16:07,819 | INFO     | mean x: 1765797340.5
[2025-12-15 14:19:26] 2025-12-15 13:16:07,819 | INFO     | mean y: 2364992.9830508474
[2025-12-15 14:19:26] 2025-12-15 13:16:07,819 | INFO     | intersect: 6685406258.2034445
[2025-12-15 14:19:26] 2025-12-15 13:16:07,819 | INFO     | chi2: 0.05647689310660531
[2025-12-15 14:19:26] 2025-12-15 13:16:07,819 | INFO     | current chi2=0.05647689310660531 (change=95.68283861517808 %)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,820 | INFO     | sum of square deviations: 3822136780.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,821 | INFO     | sum of deviations: -11291745440.999998
[2025-12-15 14:19:26] 2025-12-15 13:16:07,821 | INFO     | mean x: 1765797493.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,822 | INFO     | mean y: 2362494.5757575757
[2025-12-15 14:19:26] 2025-12-15 13:16:07,822 | INFO     | intersect: 5219061147.446045
[2025-12-15 14:19:26] 2025-12-15 13:16:07,822 | INFO     | chi2: 0.04632322871907958
[2025-12-15 14:19:26] 2025-12-15 13:16:07,822 | INFO     | current chi2=0.04632322871907958 (change=17.978440082317835 %)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,822 | INFO     | left removable region: 20
[2025-12-15 14:19:26] 2025-12-15 13:16:07,823 | INFO     | sum of square deviations: 3081657780.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,824 | INFO     | sum of deviations: -800390150.0000002
[2025-12-15 14:19:26] 2025-12-15 13:16:07,824 | INFO     | mean x: 1765797615.0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,824 | INFO     | mean y: 2355586.093023256
[2025-12-15 14:19:26] 2025-12-15 13:16:07,824 | INFO     | intersect: 460981143.7756458
[2025-12-15 14:19:26] 2025-12-15 13:16:07,825 | INFO     | chi2: 0.00300221094513946
[2025-12-15 14:19:26] 2025-12-15 13:16:07,825 | INFO     | current memory leak: -0.26 B/s (using 215 data points, chi2=0.00)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,825 | INFO     | could have reported an average CPU frequency of 2580 MHz (12 samples)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | ..............................
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . Timing measurements:
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . get job = 0 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . initial setup = 1 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . payload setup = 5 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . stage-in = 0 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . payload execution = 14691 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . stage-out = 1 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | . log creation = 0 s
[2025-12-15 14:19:26] 2025-12-15 13:16:07,826 | INFO     | ..............................
[2025-12-15 14:19:26] 2025-12-15 13:16:07,998 | INFO     | 
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | job summary report
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | --------------------------------------------------
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | PanDA job id: 6929266254
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | task id: 47898763
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | errors: (none)
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | pilot state: finished 
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | transexitcode: 0
[2025-12-15 14:19:26] 2025-12-15 13:16:07,999 | INFO     | exeerrorcode: 0
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | exeerrordiag: 
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | exitcode: 0
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | exitmsg: OK
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | cpuconsumptiontime: 56880 s
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | nevents: 400
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | neventsw: 0
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | pid: 3907793
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | pgrp: 3907793
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | corecount: 4
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | event service: False
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | sizes: {0: 2283963, 5: 2284225, 11: 2284281, 14701: 2315215, 14703: 2324235, 14706: 2324291, 14711: 2324613}
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | --------------------------------------------------
[2025-12-15 14:19:26] 2025-12-15 13:16:08,000 | INFO     | 
[2025-12-15 14:19:26] 2025-12-15 13:16:08,001 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-12-15 14:19:26] 2025-12-15 13:16:08,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | job 6929266254 has completed (purged errors)
[2025-12-15 14:19:26] 2025-12-15 13:16:08,025 | INFO     | overall cleanup function is called
[2025-12-15 14:19:26] 2025-12-15 13:16:09,032 | INFO     | --- collectZombieJob: --- 10, [3907793]
[2025-12-15 14:19:26] 2025-12-15 13:16:09,032 | INFO     | zombie collector waiting for pid 3907793
[2025-12-15 14:19:26] 2025-12-15 13:16:09,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 14:19:26] 2025-12-15 13:16:09,032 | INFO     | collected zombie processes
[2025-12-15 14:19:26] 2025-12-15 13:16:09,033 | INFO     | will attempt to kill all subprocesses of pid=3907793
[2025-12-15 14:19:26] 2025-12-15 13:16:09,439 | INFO     | process IDs to be killed: [3907793] (in reverse order)
[2025-12-15 14:19:26] 2025-12-15 13:16:09,561 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 14:19:26] 2025-12-15 13:16:09,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 14:19:26] 2025-12-15 13:16:09,575 | INFO     | did not find any defunct processes belonging to 3907793
[2025-12-15 14:19:26] 2025-12-15 13:16:09,589 | INFO     | did not find any defunct processes belonging to 3907793
[2025-12-15 14:19:26] 2025-12-15 13:16:09,589 | INFO     | ready for new job
[2025-12-15 14:19:26] 2025-12-15 13:16:09,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 14:19:26] 2025-12-15 13:16:09,592 | INFO     | ***************************************
[2025-12-15 14:19:26] 2025-12-15 13:16:09,592 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 14:19:26] 2025-12-15 13:16:09,592 | INFO     | ***************************************
[2025-12-15 14:19:26] 2025-12-15 13:16:09,592 | INFO     | 
[2025-12-15 14:19:26] 2025-12-15 13:16:09,596 | INFO     | architecture information:
[2025-12-15 14:19:26] 2025-12-15 13:16:09,597 | INFO     | executing command: cat /etc/os-release
[2025-12-15 14:19:26] 2025-12-15 13:16:09,610 | INFO     | cat /etc/os-release:
[2025-12-15 14:19:26] NAME="CentOS Linux"
[2025-12-15 14:19:26] VERSION="7 (Core)"
[2025-12-15 14:19:26] ID="centos"
[2025-12-15 14:19:26] ID_LIKE="rhel fedora"
[2025-12-15 14:19:26] VERSION_ID="7"
[2025-12-15 14:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 14:19:26] ANSI_COLOR="0;31"
[2025-12-15 14:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 14:19:26] HOME_URL="https://www.centos.org/"
[2025-12-15 14:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 14:19:26] 
[2025-12-15 14:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 14:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 14:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 14:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 14:19:26] 
[2025-12-15 14:19:26] 2025-12-15 13:16:09,610 | INFO     | ***************************************
[2025-12-15 14:19:26] 2025-12-15 13:16:10,113 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-12-15 14:19:26] 2025-12-15 13:16:10,130 | INFO     | sufficient remaining disk space (654157283328 B)
[2025-12-15 14:19:26] 2025-12-15 13:16:10,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 14:19:26] 2025-12-15 13:16:10,131 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 14:19:26] 2025-12-15 13:16:10,131 | INFO     | update_server=False
[2025-12-15 14:19:26] 2025-12-15 13:16:10,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 14:19:26] 2025-12-15 13:16:10,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 14:19:26] 2025-12-15 13:16:10,206 | INFO     | all job control threads have been joined
[2025-12-15 14:19:26] 2025-12-15 13:16:10,451 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 14:19:26] 2025-12-15 13:16:10,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 14:19:26] 2025-12-15 13:16:10,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:19:26] 2025-12-15 13:16:10,451 | INFO     | will abort loop
[2025-12-15 14:19:26] 2025-12-15 13:16:10,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 14:19:26] 2025-12-15 13:16:11,136 | INFO     | [job] retrieve thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:11,196 | INFO     | all data control threads have been joined
[2025-12-15 14:19:26] 2025-12-15 13:16:11,212 | INFO     | [job] control thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:11,240 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:11,456 | INFO     | [job] job monitor thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:11,536 | INFO     | all payload control threads have been joined
[2025-12-15 14:19:26] 2025-12-15 13:16:11,678 | INFO     | [payload] validate_post thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:11,702 | INFO     | [job] validate thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:11,787 | INFO     | [payload] failed_post thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,202 | INFO     | [data] control thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,247 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,300 | INFO     | [data] copytool_in thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,316 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,512 | INFO     | [data] copytool_out thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,542 | INFO     | [payload] control thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:12,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 14:19:26] 2025-12-15 13:16:13,937 | INFO     | [job] queue monitor thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:14,137 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:21,098 | INFO     | job.realtimelogging is not enabled
[2025-12-15 14:19:26] 2025-12-15 13:16:22,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 14:19:26] 2025-12-15 13:16:40,080 | INFO     | PID=3890827 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 14:19:26] 2025-12-15 13:16:40,081 | INFO     | .. there are 4 such processes running
[2025-12-15 14:19:26] 2025-12-15 13:16:40,082 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 14:19:26] 2025-12-15 13:16:40,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 14:19:26] 2025-12-15 13:16:40,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 14:19:26] 2025-12-15 13:17:05,147 | INFO     | [monitor] cgroup control has ended
[2025-12-15 14:19:26] 2025-12-15 13:17:06,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22978107000640)>', '<ExcThread(monitor, started 22977657669376)>']
[2025-12-15 14:19:26] 2025-12-15 13:17:07,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 14:19:26] 2025-12-15 13:17:07,217 | INFO     | [monitor] control thread has ended
[2025-12-15 14:19:26] 2025-12-15 13:17:11,435 | INFO     | all workflow threads have been joined
[2025-12-15 14:19:26] 2025-12-15 13:17:11,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 14:19:26] 2025-12-15 13:17:11,435 | INFO     | traces error code: 0
[2025-12-15 14:19:26] 2025-12-15 13:17:11,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 14:19:26] 2025-12-15 13:17:11,591 [wrapper] ==== pilot stdout END ====
[2025-12-15 14:19:26] 2025-12-15 13:17:11,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 14:19:26] 2025-12-15 13:17:11,597 [wrapper] pilotpid: 3890827
[2025-12-15 14:19:26] 2025-12-15 13:17:11,600 [wrapper] Pilot exit status: 0
[2025-12-15 14:19:26] 2025-12-15 13:17:11,611 [wrapper] pandaids: 6929266254
[2025-12-15 14:19:26] 2025-12-15 13:17:11,694 [wrapper] cleanup supervisor_pilot 4114441 3890828
[2025-12-15 14:19:26] 2025-12-15 13:17:11,697 [wrapper] Test setup, not cleaning
[2025-12-15 14:19:26] 2025-12-15 13:17:11,700 [wrapper] apfmon messages muted
[2025-12-15 14:19:26] 2025-12-15 13:17:11,703 [wrapper] ==== wrapper stdout END ====
[2025-12-15 14:19:26] 2025-12-15 13:17:11,705 [wrapper] ==== wrapper stderr END ====
[2025-12-15 14:19:26]  *** Error codes and diagnostics ***
[2025-12-15 14:19:26]     "exeErrorCode": 0,
[2025-12-15 14:19:26]     "exeErrorDiag": "",
[2025-12-15 14:19:26]     "pilotErrorCode": 0,
[2025-12-15 14:19:26]     "pilotErrorDiag": "",
[2025-12-15 14:19:26]  *** Listing of results directory ***
[2025-12-15 14:19:26] total 442620
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc    579449 Dec 13 11:01 pilot3.tar.gz
[2025-12-15 14:19:26] -rwx------ 1 boinc boinc     36322 Dec 13 11:03 runpilot2-wrapper.sh
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc      5112 Dec 13 11:03 queuedata.json
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc       100 Dec 15 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 14:19:26] -rwxr-xr-x 1 boinc boinc      7986 Dec 15 10:10 run_atlas
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc       105 Dec 15 10:10 job.xml
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc      6639 Dec 15 10:10 init_data.xml
[2025-12-15 14:19:26] -rw-r--r-- 2 boinc boinc 226224357 Dec 15 10:10 EVNT.47898761._000126.pool.root.1
[2025-12-15 14:19:26] -rw-r--r-- 2 boinc boinc     15847 Dec 15 10:10 start_atlas.sh
[2025-12-15 14:19:26] drwxrwx--x 2 boinc boinc      4096 Dec 15 10:10 shared
[2025-12-15 14:19:26] -rw-r--r-- 2 boinc boinc    592394 Dec 15 10:10 input.tar.gz
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc         0 Dec 15 10:10 boinc_lockfile
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc      2504 Dec 15 10:10 pandaJob.out
[2025-12-15 14:19:26] -rw------- 1 boinc boinc    991016 Dec 15 10:10 agis_schedconf.cvmfs.json
[2025-12-15 14:19:26] drwx------ 5 boinc boinc      4096 Dec 15 10:10 pilot3
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc       529 Dec 15 14:15 boinc_task_state.xml
[2025-12-15 14:19:26] -rw------- 1 boinc boinc 218123983 Dec 15 14:15 HITS.47898763._002513.pool.root.1
[2025-12-15 14:19:26] -rw------- 1 boinc boinc      1036 Dec 15 14:15 memory_monitor_summary.json
[2025-12-15 14:19:26] -rw------- 1 boinc boinc   1516240 Dec 15 14:15 agis_ddmendpoints.agis.ALL.json
[2025-12-15 14:19:26] -rw------- 1 boinc boinc    414185 Dec 15 14:15 log.47898763._002513.job.log.tgz.1
[2025-12-15 14:19:26] -rw------- 1 boinc boinc      7824 Dec 15 14:16 heartbeat.json
[2025-12-15 14:19:26] -rw------- 1 boinc boinc        95 Dec 15 14:16 pilot_heartbeat.json
[2025-12-15 14:19:26] -rw------- 1 boinc boinc      5091 Dec 15 14:17 pilotlog.txt
[2025-12-15 14:19:26] -rw------- 1 boinc boinc   2076692 Dec 15 14:17 log.47898763._002513.job.log.1
[2025-12-15 14:19:26] -rw------- 1 boinc boinc       357 Dec 15 14:17 output.list
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc       620 Dec 15 14:17 runtime_log
[2025-12-15 14:19:26] -rw------- 1 boinc boinc   2508800 Dec 15 14:17 result.tar.gz
[2025-12-15 14:19:26] -rw------- 1 boinc boinc       666 Dec 15 14:17 uzLMDmzdbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIiOKDm77ZwAo.diag
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc      9206 Dec 15 14:17 runtime_log.err
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc        27 Dec 15 14:19 wrapper_checkpoint.txt
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc      8192 Dec 15 14:19 boinc_mmap_file
[2025-12-15 14:19:26] -rw-r--r-- 1 boinc boinc     21140 Dec 15 14:19 stderr.txt
[2025-12-15 14:19:26] HITS file was successfully produced:
[2025-12-15 14:19:26] -rw------- 1 boinc boinc 218123983 Dec 15 14:15 shared/HITS.pool.root.1
[2025-12-15 14:19:26]  *** Contents of shared directory: ***
[2025-12-15 14:19:26] total 436988
[2025-12-15 14:19:26] -rw-r--r-- 2 boinc boinc 226224357 Dec 15 10:10 ATLAS.root_0
[2025-12-15 14:19:26] -rw-r--r-- 2 boinc boinc     15847 Dec 15 10:10 start_atlas.sh
[2025-12-15 14:19:26] -rw-r--r-- 2 boinc boinc    592394 Dec 15 10:10 input.tar.gz
[2025-12-15 14:19:26] -rw------- 1 boinc boinc 218123983 Dec 15 14:15 HITS.pool.root.1
[2025-12-15 14:19:26] -rw------- 1 boinc boinc   2508800 Dec 15 14:17 result.tar.gz
14:19:28 (3884832): run_atlas exited; CPU time 57549.653173
14:19:28 (3884832): called boinc_finish(0)

</stderr_txt>
]]>

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