Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:50:27 (7353): wrapper (7.7.26015): starting
20:50:27 (7353): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 20:50:27] Arguments: --nthreads 12
[2025-12-13 20:50:27] Threads: 12
[2025-12-13 20:50:27] Checking for CVMFS
[2025-12-13 20:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:50:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:50:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:50:27] 2.11.2.0 2925 312964 95608 153979 2 59 16343631 20275201 1 130560 1 138485560 99.967 18181546 15174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 20:50:27] CVMFS is ok
[2025-12-13 20:50:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:50:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:50:27] Further information can be found at the LHC@home message board.
[2025-12-13 20:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:50:27] Checking for apptainer binary...
[2025-12-13 20:50:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:50:27] Running /usr/bin/apptainer --version
[2025-12-13 20:50:27] apptainer version 1.3.2-1.el7
[2025-12-13 20:50:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:50:29] c-205-9.aglt2.org
[2025-12-13 20:50:29] apptainer works
[2025-12-13 20:50:29] Set ATHENA_PROC_NUMBER=12
[2025-12-13 20:50:29] Set ATHENA_CORE_NUMBER=12
[2025-12-13 20:50:29] Starting ATLAS job with PandaID=6929308058
[2025-12-13 20:50:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 22:27:01]  *** The last 200 lines of the pilot log: ***
[2025-12-13 22:27:01]  status=None
[2025-12-13 22:27:01]  status_code=0
[2025-12-13 22:27:01]  storage_token=
[2025-12-13 22:27:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929308058/log.47898836._001256.job.log.tgz.1
[2025-12-13 22:27:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/80/log.47898836._001256.job.log.tgz.1
[2025-12-13 22:27:01]  workdir=None
[2025-12-13 22:27:01] ]
[2025-12-13 22:27:01] 2025-12-14 03:26:22,649 | INFO     | transferring file log.47898836._001256.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929308058/log.47898836._001256.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 22:27:01] 2025-12-14 03:26:22,649 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929308058/log.47898836._001256.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898836._001256.job
[2025-12-13 22:27:01] 2025-12-14 03:26:22,673 | INFO     | adding to output.list: log.47898836._001256.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/80/log.47898836._001256.job.log.tg
[2025-12-13 22:27:01] 2025-12-14 03:26:22,674 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 22:27:01] 2025-12-14 03:26:22,674 | INFO     | summary of transferred files:
[2025-12-13 22:27:01] 2025-12-14 03:26:22,674 | INFO     |  -- lfn=log.47898836._001256.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 22:27:01] 2025-12-14 03:26:22,675 | INFO     | stage-out finished correctly
[2025-12-13 22:27:01] 2025-12-14 03:26:22,789 | WARNING  | process 17451 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 22:27:01] 2025-12-14 03:26:22,790 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929308058/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 22:27:01] 2025-12-14 03:26:22,885 | INFO     | number of running child processes to parent process 17451: 1
[2025-12-13 22:27:01] 2025-12-14 03:26:22,885 | INFO     | maximum number of monitored processes: 6
[2025-12-13 22:27:01] 2025-12-14 03:26:23,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 22:27:01] 2025-12-14 03:26:23,496 | INFO     | job 6929308058 has state=finished
[2025-12-13 22:27:01] 2025-12-14 03:26:23,496 | INFO     | preparing for final server update for job 6929308058 in state='finished'
[2025-12-13 22:27:01] 2025-12-14 03:26:23,572 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-13 22:27:01] 2025-12-14 03:26:23,572 | INFO     | this job has now completed (state=finished)
[2025-12-13 22:27:01] 2025-12-14 03:26:23,573 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 22:27:01] 2025-12-14 03:26:23,573 | INFO     | log transfer has been attempted: DONE
[2025-12-13 22:27:01] 2025-12-14 03:26:23,573 | INFO     | job 6929308058 has finished - writing final server update
[2025-12-13 22:27:01] 2025-12-14 03:26:23,574 | INFO     | total number of processed events: 400 (read)
[2025-12-13 22:27:01] 2025-12-14 03:26:23,574 | INFO     | executing command: lscpu
[2025-12-13 22:27:01] 2025-12-14 03:26:23,600 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 22:27:01] 2025-12-14 03:26:23,884 | INFO     | time since job start (5739s) is within the limit (174528.0s)
[2025-12-13 22:27:01] 2025-12-14 03:26:25,389 | INFO     | monitor loop #423: job 0:6929308058 is in state 'finished'
[2025-12-13 22:27:01] 2025-12-14 03:26:25,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:27:01] 2025-12-14 03:26:25,891 | INFO     | time since job start (5741s) is within the limit (174528.0s)
[2025-12-13 22:27:01] 2025-12-14 03:26:27,892 | INFO     | monitor loop #424: job 0:6929308058 is in state 'finished'
[2025-12-13 22:27:01] 2025-12-14 03:26:27,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 22:27:01] 2025-12-14 03:26:27,896 | INFO     | time since job start (5743s) is within the limit (174528.0s)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,398 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 22:27:01] 2025-12-14 03:26:28,402 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.0833333333333
[2025-12-13 22:27:01] 2025-12-14 03:26:28,404 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929308058/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,405 | INFO     | extracted standard info from prmon json
[2025-12-13 22:27:01] 2025-12-14 03:26:28,405 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 22:27:01] 2025-12-14 03:26:28,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 22:27:01] 2025-12-14 03:26:28,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 22:27:01] 2025-12-14 03:26:28,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 22:27:01] 2025-12-14 03:26:28,408 | INFO     | fitting pss+swap vs Time
[2025-12-13 22:27:01] 2025-12-14 03:26:28,408 | INFO     | sum of square deviations: 204163828.0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,409 | INFO     | sum of deviations: -9404675366.0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,409 | INFO     | mean x: 1765680001.0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,409 | INFO     | mean y: 2738198.827586207
[2025-12-13 22:27:01] 2025-12-14 03:26:28,409 | INFO     | intersect: 81337651304.21645
[2025-12-13 22:27:01] 2025-12-14 03:26:28,409 | INFO     | chi2: 0.10191054160807192
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | current memory leak: -46.06 B/s (using 87 data points, chi2=0.10)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | could have reported an average CPU frequency of 2130 MHz (7 samples)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | ..............................
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | . Timing measurements:
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | . get job = 0 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | . initial setup = 2 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,410 | INFO     | . payload setup = 7 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,411 | INFO     | . stage-in = 0 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,411 | INFO     | . payload execution = 5710 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,411 | INFO     | . stage-out = 0 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,411 | INFO     | . log creation = 0 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,411 | INFO     | ..............................
[2025-12-13 22:27:01] 2025-12-14 03:26:28,492 | INFO     | 
[2025-12-13 22:27:01] 2025-12-14 03:26:28,493 | INFO     | job summary report
[2025-12-13 22:27:01] 2025-12-14 03:26:28,493 | INFO     | --------------------------------------------------
[2025-12-13 22:27:01] 2025-12-14 03:26:28,493 | INFO     | PanDA job id: 6929308058
[2025-12-13 22:27:01] 2025-12-14 03:26:28,493 | INFO     | task id: 47898836
[2025-12-13 22:27:01] 2025-12-14 03:26:28,493 | INFO     | errors: (none)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 22:27:01] 2025-12-14 03:26:28,494 | INFO     | pilot state: finished 
[2025-12-13 22:27:01] 2025-12-14 03:26:28,494 | INFO     | transexitcode: 0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,494 | INFO     | exeerrorcode: 0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,494 | INFO     | exeerrordiag: 
[2025-12-13 22:27:01] 2025-12-14 03:26:28,494 | INFO     | exitcode: 0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,494 | INFO     | exitmsg: OK
[2025-12-13 22:27:01] 2025-12-14 03:26:28,495 | INFO     | cpuconsumptiontime: 63510 s
[2025-12-13 22:27:01] 2025-12-14 03:26:28,495 | INFO     | nevents: 400
[2025-12-13 22:27:01] 2025-12-14 03:26:28,495 | INFO     | neventsw: 0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,495 | INFO     | pid: 17451
[2025-12-13 22:27:01] 2025-12-14 03:26:28,495 | INFO     | pgrp: 17451
[2025-12-13 22:27:01] 2025-12-14 03:26:28,495 | INFO     | corecount: 12
[2025-12-13 22:27:01] 2025-12-14 03:26:28,496 | INFO     | event service: False
[2025-12-13 22:27:01] 2025-12-14 03:26:28,496 | INFO     | sizes: {0: 2284005, 5: 2284267, 11: 2284323, 5721: 2310963, 5722: 2319961, 5723: 2320017, 5728: 2320339}
[2025-12-13 22:27:01] 2025-12-14 03:26:28,496 | INFO     | --------------------------------------------------
[2025-12-13 22:27:01] 2025-12-14 03:26:28,496 | INFO     | 
[2025-12-13 22:27:01] 2025-12-14 03:26:28,496 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 22:27:01] 2025-12-14 03:26:28,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,525 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 22:27:01] 2025-12-14 03:26:28,525 | INFO     | job 6929308058 has completed (purged errors)
[2025-12-13 22:27:01] 2025-12-14 03:26:28,525 | INFO     | overall cleanup function is called
[2025-12-13 22:27:01] 2025-12-14 03:26:29,534 | INFO     | --- collectZombieJob: --- 10, [17451]
[2025-12-13 22:27:01] 2025-12-14 03:26:29,534 | INFO     | zombie collector waiting for pid 17451
[2025-12-13 22:27:01] 2025-12-14 03:26:29,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 22:27:01] 2025-12-14 03:26:29,534 | INFO     | collected zombie processes
[2025-12-13 22:27:01] 2025-12-14 03:26:29,534 | INFO     | will attempt to kill all subprocesses of pid=17451
[2025-12-13 22:27:01] 2025-12-14 03:26:29,623 | INFO     | process IDs to be killed: [17451] (in reverse order)
[2025-12-13 22:27:01] 2025-12-14 03:26:29,678 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 22:27:01] 2025-12-14 03:26:29,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 22:27:01] 2025-12-14 03:26:29,681 | INFO     | did not find any defunct processes belonging to 17451
[2025-12-13 22:27:01] 2025-12-14 03:26:29,684 | INFO     | did not find any defunct processes belonging to 17451
[2025-12-13 22:27:01] 2025-12-14 03:26:29,684 | INFO     | ready for new job
[2025-12-13 22:27:01] 2025-12-14 03:26:29,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 22:27:01] 2025-12-14 03:26:29,686 | INFO     | ***************************************
[2025-12-13 22:27:01] 2025-12-14 03:26:29,686 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 22:27:01] 2025-12-14 03:26:29,686 | INFO     | ***************************************
[2025-12-13 22:27:01] 2025-12-14 03:26:29,686 | INFO     | 
[2025-12-13 22:27:01] 2025-12-14 03:26:29,687 | INFO     | architecture information:
[2025-12-13 22:27:01] 2025-12-14 03:26:29,688 | INFO     | executing command: cat /etc/os-release
[2025-12-13 22:27:01] 2025-12-14 03:26:29,704 | INFO     | cat /etc/os-release:
[2025-12-13 22:27:01] NAME="CentOS Linux"
[2025-12-13 22:27:01] VERSION="7 (Core)"
[2025-12-13 22:27:01] ID="centos"
[2025-12-13 22:27:01] ID_LIKE="rhel fedora"
[2025-12-13 22:27:01] VERSION_ID="7"
[2025-12-13 22:27:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 22:27:01] ANSI_COLOR="0;31"
[2025-12-13 22:27:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 22:27:01] HOME_URL="https://www.centos.org/"
[2025-12-13 22:27:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 22:27:01] 
[2025-12-13 22:27:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 22:27:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 22:27:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 22:27:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 22:27:01] 
[2025-12-13 22:27:01] 2025-12-14 03:26:29,704 | INFO     | ***************************************
[2025-12-13 22:27:01] 2025-12-14 03:26:30,207 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 22:27:01] 2025-12-14 03:26:30,224 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-12-13 22:27:01] 2025-12-14 03:26:30,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 22:27:01] 2025-12-14 03:26:30,225 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 22:27:01] 2025-12-14 03:26:30,225 | INFO     | update_server=False
[2025-12-13 22:27:01] 2025-12-14 03:26:30,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 22:27:01] 2025-12-14 03:26:30,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 22:27:01] 2025-12-14 03:26:30,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:27:01] 2025-12-14 03:26:30,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 22:27:01] 2025-12-14 03:26:30,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 22:27:01] 2025-12-14 03:26:30,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 22:27:01] 2025-12-14 03:26:30,396 | INFO     | will abort loop
[2025-12-13 22:27:01] 2025-12-14 03:26:30,548 | INFO     | all payload control threads have been joined
[2025-12-13 22:27:01] 2025-12-14 03:26:30,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 22:27:01] 2025-12-14 03:26:31,050 | INFO     | all data control threads have been joined
[2025-12-13 22:27:01] 2025-12-14 03:26:31,231 | INFO     | [job] retrieve thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,232 | INFO     | [job] queue monitor thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,402 | INFO     | [job] job monitor thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,478 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,553 | INFO     | [payload] control thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,653 | INFO     | [payload] failed_post thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,804 | INFO     | [data] copytool_in thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,830 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:31,901 | INFO     | all job control threads have been joined
[2025-12-13 22:27:01] 2025-12-14 03:26:32,056 | INFO     | [data] control thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:32,172 | INFO     | [job] validate thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:32,512 | INFO     | [payload] validate_post thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:32,677 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:32,774 | INFO     | [data] copytool_out thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:32,907 | INFO     | [job] control thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:34,232 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:40,735 | INFO     | job.realtimelogging is not enabled
[2025-12-13 22:27:01] 2025-12-14 03:26:41,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 22:27:01] 2025-12-14 03:26:53,228 | INFO     | [monitor] cgroup control has ended
[2025-12-13 22:27:01] 2025-12-14 03:26:54,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847157778240)>', '<ExcThread(monitor, started 139846140028672)>']
[2025-12-13 22:27:01] 2025-12-14 03:26:59,258 | INFO     | all workflow threads have been joined
[2025-12-13 22:27:01] 2025-12-14 03:26:59,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 22:27:01] 2025-12-14 03:26:59,259 | INFO     | traces error code: 0
[2025-12-13 22:27:01] 2025-12-14 03:26:59,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 22:27:01] 2025-12-14 03:27:01,104 | INFO     | PID=11030 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 22:27:01] 2025-12-14 03:27:01,105 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 22:27:01] 2025-12-14 03:27:01,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 22:27:01] 2025-12-14 03:27:01,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 22:27:01] 2025-12-14 03:27:01,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 22:27:01] 2025-12-14 03:27:01,105 | INFO     | [monitor] control thread has ended
[2025-12-13 22:27:01] 2025-12-14 03:27:01,195 [wrapper] ==== pilot stdout END ====
[2025-12-13 22:27:01] 2025-12-14 03:27:01,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 22:27:01] 2025-12-14 03:27:01,203 [wrapper] pilotpid: 11030
[2025-12-13 22:27:01] 2025-12-14 03:27:01,207 [wrapper] Pilot exit status: 0
[2025-12-13 22:27:01] 2025-12-14 03:27:01,222 [wrapper] pandaids: 6929308058
[2025-12-13 22:27:01] 2025-12-14 03:27:01,264 [wrapper] cleanup supervisor_pilot 16840 11031
[2025-12-13 22:27:01] 2025-12-14 03:27:01,268 [wrapper] Test setup, not cleaning
[2025-12-13 22:27:01] 2025-12-14 03:27:01,273 [wrapper] apfmon messages muted
[2025-12-13 22:27:01] 2025-12-14 03:27:01,276 [wrapper] ==== wrapper stdout END ====
[2025-12-13 22:27:01] 2025-12-14 03:27:01,280 [wrapper] ==== wrapper stderr END ====
[2025-12-13 22:27:01]  *** Error codes and diagnostics ***
[2025-12-13 22:27:01]     "exeErrorCode": 0,
[2025-12-13 22:27:01]     "exeErrorDiag": "",
[2025-12-13 22:27:01]     "pilotErrorCode": 0,
[2025-12-13 22:27:01]     "pilotErrorDiag": "",
[2025-12-13 22:27:01]  *** Listing of results directory ***
[2025-12-13 22:27:01] total 407576
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:35 pilot3.tar.gz
[2025-12-13 22:27:01] -rwx------ 1 boincer umatlas     36322 Dec 13 06:37 runpilot2-wrapper.sh
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:41 queuedata.json
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas       100 Dec 13 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 22:27:01] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 20:50 run_atlas
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas       105 Dec 13 20:50 job.xml
[2025-12-13 22:27:01] -rw-r--r-- 2 boincer umatlas 212911902 Dec 13 20:50 EVNT.47898833._000071.pool.root.1
[2025-12-13 22:27:01] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:50 start_atlas.sh
[2025-12-13 22:27:01] drwxrwx--x 2 boincer umatlas      4096 Dec 13 20:50 shared
[2025-12-13 22:27:01] -rw-r--r-- 2 boincer umatlas    592400 Dec 13 20:50 input.tar.gz
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas         0 Dec 13 20:50 boinc_lockfile
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas      2548 Dec 13 20:50 pandaJob.out
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas        57 Dec 13 20:50 setup.sh.local
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas    991744 Dec 13 20:50 agis_schedconf.cvmfs.json
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas   1516240 Dec 13 20:50 agis_ddmendpoints.agis.ALL.json
[2025-12-13 22:27:01] drwx------ 5 boincer umatlas      4096 Dec 13 20:50 pilot3
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 22:22 init_data.xml
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas 198109438 Dec 13 22:25 HITS.47898836._001256.pool.root.1
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas       529 Dec 13 22:25 boinc_task_state.xml
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas        95 Dec 13 22:26 pilot_heartbeat.json
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas      1045 Dec 13 22:26 memory_monitor_summary.json
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas    393320 Dec 13 22:26 log.47898836._001256.job.log.tgz.1
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas      7844 Dec 13 22:26 heartbeat.json
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 22:26 boinc_mmap_file
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas        27 Dec 13 22:26 wrapper_checkpoint.txt
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas       745 Dec 13 22:27 pilotlog.txt
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas    818767 Dec 13 22:27 log.47898836._001256.job.log.1
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas       357 Dec 13 22:27 output.list
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas       620 Dec 13 22:27 runtime_log
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas   1228800 Dec 13 22:27 result.tar.gz
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 22:27 runtime_log.err
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas       658 Dec 13 22:27 FDFNDmf7co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhEPKDmEq4qrn.diag
[2025-12-13 22:27:01] -rw-r--r-- 1 boincer umatlas     22040 Dec 13 22:27 stderr.txt
[2025-12-13 22:27:01] HITS file was successfully produced:
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas 198109438 Dec 13 22:25 shared/HITS.pool.root.1
[2025-12-13 22:27:01]  *** Contents of shared directory: ***
[2025-12-13 22:27:01] total 403192
[2025-12-13 22:27:01] -rw-r--r-- 2 boincer umatlas 212911902 Dec 13 20:50 ATLAS.root_0
[2025-12-13 22:27:01] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:50 start_atlas.sh
[2025-12-13 22:27:01] -rw-r--r-- 2 boincer umatlas    592400 Dec 13 20:50 input.tar.gz
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas 198109438 Dec 13 22:25 HITS.pool.root.1
[2025-12-13 22:27:01] -rw------- 1 boincer umatlas   1228800 Dec 13 22:27 result.tar.gz
22:27:02 (7353): run_atlas exited; CPU time 63496.081001
22:27:02 (7353): called boinc_finish(0)

</stderr_txt>
]]>

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