Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:30:38 (6460): wrapper (7.7.26015): starting
20:30:38 (6460): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 20:30:38] Arguments: --nthreads 8
[2025-12-13 20:30:38] Threads: 8
[2025-12-13 20:30:38] Checking for CVMFS
[2025-12-13 20:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:30:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:30:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:30:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:30:39] 2.11.2.0 3643 91146 131372 153979 0 59 17191198 18432000 1833 130560 0 56338202 99.980 3476823 29315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 20:30:39] CVMFS is ok
[2025-12-13 20:30:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 20:30:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 20:30:39] Further information can be found at the LHC@home message board.
[2025-12-13 20:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:30:39] Checking for apptainer binary...
[2025-12-13 20:30:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:30:39] Running /usr/bin/apptainer --version
[2025-12-13 20:30:39] apptainer version 1.3.2-1.el7
[2025-12-13 20:30:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:30:39] c-206-15.aglt2.org
[2025-12-13 20:30:39] apptainer works
[2025-12-13 20:30:39] Set ATHENA_PROC_NUMBER=8
[2025-12-13 20:30:39] Set ATHENA_CORE_NUMBER=8
[2025-12-13 20:30:40] Starting ATLAS job with PandaID=6929363311
[2025-12-13 20:30:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 00:47:23]  *** The last 200 lines of the pilot log: ***
[2025-12-14 00:47:23] 2025-12-14 05:46:52,059 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2466.8333333333335
[2025-12-14 00:47:23] 2025-12-14 05:46:52,062 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929363311/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,062 | INFO     | extracted standard info from prmon json
[2025-12-14 00:47:23] 2025-12-14 05:46:52,062 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 00:47:23] 2025-12-14 05:46:52,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 00:47:23] 2025-12-14 05:46:52,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 00:47:23] 2025-12-14 05:46:52,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 00:47:23] 2025-12-14 05:46:52,067 | INFO     | fitting pss+swap vs Time
[2025-12-14 00:47:23] 2025-12-14 05:46:52,067 | INFO     | sum of square deviations: 4962187923.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,068 | INFO     | sum of deviations: -27807266233.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,069 | INFO     | mean x: 1765683532.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,069 | INFO     | mean y: 2506044.876984127
[2025-12-14 00:47:23] 2025-12-14 05:46:52,069 | INFO     | intersect: 9897099485.153318
[2025-12-14 00:47:23] 2025-12-14 05:46:52,069 | INFO     | chi2: 2.337270529959686
[2025-12-14 00:47:23] 2025-12-14 05:46:52,070 | INFO     | sum of square deviations: 4672638308.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,071 | INFO     | sum of deviations: -10491309602.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,071 | INFO     | mean x: 1765683380.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,071 | INFO     | mean y: 2515023.8421052634
[2025-12-14 00:47:23] 2025-12-14 05:46:52,071 | INFO     | intersect: 3966941495.0650983
[2025-12-14 00:47:23] 2025-12-14 05:46:52,072 | INFO     | chi2: 1.5681844893984012
[2025-12-14 00:47:23] 2025-12-14 05:46:52,072 | INFO     | current chi2=1.5681844893984012 (change=32.90530688266327 %)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,072 | INFO     | sum of square deviations: 4394577280.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | sum of deviations: -10110927967.50001
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | mean x: 1765683227.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | mean y: 2515232.491735537
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | intersect: 4064952820.2645035
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | chi2: 1.5678297934715792
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | current chi2=1.5678297934715792 (change=0.0226182524581648 %)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,074 | INFO     | right removable region: 241
[2025-12-14 00:47:23] 2025-12-14 05:46:52,075 | INFO     | sum of square deviations: 4672638308.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,076 | INFO     | sum of deviations: -63449671001.000015
[2025-12-14 00:47:23] 2025-12-14 05:46:52,076 | INFO     | mean x: 1765683685.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,076 | INFO     | mean y: 2524637.165991903
[2025-12-14 00:47:23] 2025-12-14 05:46:52,076 | INFO     | intersect: 23978711433.66463
[2025-12-14 00:47:23] 2025-12-14 05:46:52,077 | INFO     | chi2: 1.0010843221278838
[2025-12-14 00:47:23] 2025-12-14 05:46:52,077 | INFO     | current chi2=1.0010843221278838 (change=57.168658514461704 %)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,077 | INFO     | sum of square deviations: 4394577280.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | sum of deviations: -63516099848.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | mean x: 1765683837.5
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | mean y: 2524645.0950413225
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | intersect: 25522465191.179302
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | chi2: 0.9815072152132114
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | current chi2=0.9815072152132114 (change=1.9555902017384226 %)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,079 | INFO     | left removable region: 20
[2025-12-14 00:47:23] 2025-12-14 05:46:52,080 | INFO     | sum of square deviations: 3346927870.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,081 | INFO     | sum of deviations: -31213322471.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,081 | INFO     | mean x: 1765683807.0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,081 | INFO     | mean y: 2526354.71040724
[2025-12-14 00:47:23] 2025-12-14 05:46:52,081 | INFO     | intersect: 16469226621.457993
[2025-12-14 00:47:23] 2025-12-14 05:46:52,082 | INFO     | chi2: 0.16862671011529765
[2025-12-14 00:47:23] 2025-12-14 05:46:52,082 | INFO     | current memory leak: -9.33 B/s (using 221 data points, chi2=0.17)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,082 | INFO     | could have reported an average CPU frequency of 2572 MHz (12 samples)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,082 | INFO     | ..............................
[2025-12-14 00:47:23] 2025-12-14 05:46:52,082 | INFO     | . Timing measurements:
[2025-12-14 00:47:23] 2025-12-14 05:46:52,082 | INFO     | . get job = 0 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | . initial setup = 2 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | . payload setup = 5 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | . stage-in = 0 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | . payload execution = 15328 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | . stage-out = 2 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | . log creation = 0 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,083 | INFO     | ..............................
[2025-12-14 00:47:23] 2025-12-14 05:46:52,186 | INFO     | 
[2025-12-14 00:47:23] 2025-12-14 05:46:52,186 | INFO     | job summary report
[2025-12-14 00:47:23] 2025-12-14 05:46:52,186 | INFO     | --------------------------------------------------
[2025-12-14 00:47:23] 2025-12-14 05:46:52,186 | INFO     | PanDA job id: 6929363311
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | task id: 47898763
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | errors: (none)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | pilot state: finished 
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | transexitcode: 0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | exeerrorcode: 0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | exeerrordiag: 
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | exitcode: 0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | exitmsg: OK
[2025-12-14 00:47:23] 2025-12-14 05:46:52,187 | INFO     | cpuconsumptiontime: 116056 s
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | nevents: 400
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | neventsw: 0
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | pid: 16677
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | pgrp: 16677
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | corecount: 8
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | event service: False
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | sizes: {0: 2283124, 1: 2283980, 2: 2283980, 5: 2284270, 12: 2284326, 15336: 2315464, 15339: 2324462, 15340: 2324518, 15345: 2324712}
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | --------------------------------------------------
[2025-12-14 00:47:23] 2025-12-14 05:46:52,188 | INFO     | 
[2025-12-14 00:47:23] 2025-12-14 05:46:52,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 00:47:23] 2025-12-14 05:46:52,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 00:47:23] 2025-12-14 05:46:52,211 | INFO     | job 6929363311 has completed (purged errors)
[2025-12-14 00:47:23] 2025-12-14 05:46:52,211 | INFO     | overall cleanup function is called
[2025-12-14 00:47:23] 2025-12-14 05:46:53,219 | INFO     | --- collectZombieJob: --- 10, [16677]
[2025-12-14 00:47:23] 2025-12-14 05:46:53,220 | INFO     | zombie collector waiting for pid 16677
[2025-12-14 00:47:23] 2025-12-14 05:46:53,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 00:47:23] 2025-12-14 05:46:53,220 | INFO     | collected zombie processes
[2025-12-14 00:47:23] 2025-12-14 05:46:53,220 | INFO     | will attempt to kill all subprocesses of pid=16677
[2025-12-14 00:47:23] 2025-12-14 05:46:53,383 | INFO     | process IDs to be killed: [16677] (in reverse order)
[2025-12-14 00:47:23] 2025-12-14 05:46:53,436 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 00:47:23] 2025-12-14 05:46:53,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 00:47:23] 2025-12-14 05:46:53,439 | INFO     | did not find any defunct processes belonging to 16677
[2025-12-14 00:47:23] 2025-12-14 05:46:53,441 | INFO     | did not find any defunct processes belonging to 16677
[2025-12-14 00:47:23] 2025-12-14 05:46:53,441 | INFO     | ready for new job
[2025-12-14 00:47:23] 2025-12-14 05:46:53,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 00:47:23] 2025-12-14 05:46:53,443 | INFO     | ***************************************
[2025-12-14 00:47:23] 2025-12-14 05:46:53,443 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 00:47:23] 2025-12-14 05:46:53,443 | INFO     | ***************************************
[2025-12-14 00:47:23] 2025-12-14 05:46:53,443 | INFO     | 
[2025-12-14 00:47:23] 2025-12-14 05:46:53,444 | INFO     | architecture information:
[2025-12-14 00:47:23] 2025-12-14 05:46:53,445 | INFO     | executing command: cat /etc/os-release
[2025-12-14 00:47:23] 2025-12-14 05:46:53,455 | INFO     | cat /etc/os-release:
[2025-12-14 00:47:23] NAME="CentOS Linux"
[2025-12-14 00:47:23] VERSION="7 (Core)"
[2025-12-14 00:47:23] ID="centos"
[2025-12-14 00:47:23] ID_LIKE="rhel fedora"
[2025-12-14 00:47:23] VERSION_ID="7"
[2025-12-14 00:47:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 00:47:23] ANSI_COLOR="0;31"
[2025-12-14 00:47:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 00:47:23] HOME_URL="https://www.centos.org/"
[2025-12-14 00:47:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 00:47:23] 
[2025-12-14 00:47:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 00:47:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 00:47:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 00:47:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 00:47:23] 
[2025-12-14 00:47:23] 2025-12-14 05:46:53,456 | INFO     | ***************************************
[2025-12-14 00:47:23] 2025-12-14 05:46:53,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 00:47:23] 2025-12-14 05:46:54,017 | INFO     | sufficient remaining disk space (27980201984 B)
[2025-12-14 00:47:23] 2025-12-14 05:46:54,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 00:47:23] 2025-12-14 05:46:54,018 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 00:47:23] 2025-12-14 05:46:54,018 | INFO     | update_server=False
[2025-12-14 00:47:23] 2025-12-14 05:46:54,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 00:47:23] 2025-12-14 05:46:54,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 00:47:23] 2025-12-14 05:46:54,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 00:47:23] 2025-12-14 05:46:54,366 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 00:47:23] 2025-12-14 05:46:54,366 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 00:47:23] 2025-12-14 05:46:54,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 00:47:23] 2025-12-14 05:46:54,367 | INFO     | will abort loop
[2025-12-14 00:47:23] 2025-12-14 05:46:54,693 | INFO     | all payload control threads have been joined
[2025-12-14 00:47:23] 2025-12-14 05:46:54,813 | INFO     | all data control threads have been joined
[2025-12-14 00:47:23] 2025-12-14 05:46:54,979 | INFO     | all job control threads have been joined
[2025-12-14 00:47:23] 2025-12-14 05:46:55,024 | INFO     | [job] retrieve thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,026 | INFO     | [job] queue monitor thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,372 | INFO     | [job] job monitor thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,379 | INFO     | [job] validate thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,492 | INFO     | [payload] validate_post thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,668 | INFO     | [payload] failed_post thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,698 | INFO     | [payload] control thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,738 | INFO     | [data] copytool_in thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,818 | INFO     | [data] control thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:55,980 | INFO     | [job] control thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:56,042 | INFO     | [data] copytool_out thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:56,134 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:56,141 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:56,143 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:46:57,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 00:47:23] 2025-12-14 05:47:01,048 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:47:04,907 | INFO     | job.realtimelogging is not enabled
[2025-12-14 00:47:23] 2025-12-14 05:47:05,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 00:47:23] 2025-12-14 05:47:15,925 | INFO     | [monitor] cgroup control has ended
[2025-12-14 00:47:23] 2025-12-14 05:47:16,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185431693120)>', '<ExcThread(monitor, started 140184746178304)>']
[2025-12-14 00:47:23] 2025-12-14 05:47:21,899 | INFO     | all workflow threads have been joined
[2025-12-14 00:47:23] 2025-12-14 05:47:21,900 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 00:47:23] 2025-12-14 05:47:21,900 | INFO     | traces error code: 0
[2025-12-14 00:47:23] 2025-12-14 05:47:21,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 00:47:23] 2025-12-14 05:47:23,620 | INFO     | PID=10127 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-14 00:47:23] 2025-12-14 05:47:23,620 | INFO     | .. there are 3 such processes running
[2025-12-14 00:47:23] 2025-12-14 05:47:23,621 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 00:47:23] 2025-12-14 05:47:23,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 00:47:23] 2025-12-14 05:47:23,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 00:47:23] 2025-12-14 05:47:23,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 00:47:23] 2025-12-14 05:47:23,622 | INFO     | [monitor] control thread has ended
[2025-12-14 00:47:23] 2025-12-14 05:47:23,736 [wrapper] ==== pilot stdout END ====
[2025-12-14 00:47:23] 2025-12-14 05:47:23,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 00:47:23] 2025-12-14 05:47:23,741 [wrapper] pilotpid: 10127
[2025-12-14 00:47:23] 2025-12-14 05:47:23,743 [wrapper] Pilot exit status: 0
[2025-12-14 00:47:23] 2025-12-14 05:47:23,752 [wrapper] pandaids: 6929363311
[2025-12-14 00:47:23] 2025-12-14 05:47:23,791 [wrapper] cleanup supervisor_pilot 17581 10128
[2025-12-14 00:47:23] 2025-12-14 05:47:23,793 [wrapper] Test setup, not cleaning
[2025-12-14 00:47:23] 2025-12-14 05:47:23,796 [wrapper] apfmon messages muted
[2025-12-14 00:47:23] 2025-12-14 05:47:23,798 [wrapper] ==== wrapper stdout END ====
[2025-12-14 00:47:23] 2025-12-14 05:47:23,800 [wrapper] ==== wrapper stderr END ====
[2025-12-14 00:47:23]  *** Error codes and diagnostics ***
[2025-12-14 00:47:23]     "exeErrorCode": 0,
[2025-12-14 00:47:23]     "exeErrorDiag": "",
[2025-12-14 00:47:23]     "pilotErrorCode": 0,
[2025-12-14 00:47:23]     "pilotErrorDiag": "",
[2025-12-14 00:47:23]  *** Listing of results directory ***
[2025-12-14 00:47:23] total 436100
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 12:18 pilot3.tar.gz
[2025-12-14 00:47:23] -rwx------ 1 boincer umatlas     36322 Dec 13 12:23 runpilot2-wrapper.sh
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 12:25 queuedata.json
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas       100 Dec 13 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 00:47:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 20:30 run_atlas
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas       105 Dec 13 20:30 job.xml
[2025-12-14 00:47:23] -rw-r--r-- 2 boincer umatlas 222080460 Dec 13 20:30 EVNT.47898761._000143.pool.root.1
[2025-12-14 00:47:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:30 start_atlas.sh
[2025-12-14 00:47:23] drwxrwx--x 2 boincer umatlas      4096 Dec 13 20:30 shared
[2025-12-14 00:47:23] -rw-r--r-- 2 boincer umatlas    592400 Dec 13 20:30 input.tar.gz
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas         0 Dec 13 20:30 boinc_lockfile
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas      2504 Dec 13 20:30 pandaJob.out
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas        57 Dec 13 20:30 setup.sh.local
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas    991744 Dec 13 20:30 agis_schedconf.cvmfs.json
[2025-12-14 00:47:23] drwx------ 5 boincer umatlas      4096 Dec 13 20:30 pilot3
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas      5953 Dec 14 00:45 init_data.xml
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas 215308482 Dec 14 00:46 HITS.47898763._006701.pool.root.1
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas       532 Dec 14 00:46 boinc_task_state.xml
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas      1055 Dec 14 00:46 memory_monitor_summary.json
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas   1516240 Dec 14 00:46 agis_ddmendpoints.agis.ALL.json
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas    494184 Dec 14 00:46 log.47898763._006701.job.log.tgz.1
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas      7858 Dec 14 00:46 heartbeat.json
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas      8192 Dec 14 00:47 boinc_mmap_file
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas        29 Dec 14 00:47 wrapper_checkpoint.txt
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas        95 Dec 14 00:47 pilot_heartbeat.json
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas       820 Dec 14 00:47 pilotlog.txt
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas   2135502 Dec 14 00:47 log.47898763._006701.job.log.1
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas       357 Dec 14 00:47 output.list
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas       620 Dec 14 00:47 runtime_log
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas   2652160 Dec 14 00:47 result.tar.gz
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas      9343 Dec 14 00:47 runtime_log.err
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas       663 Dec 14 00:47 KiTKDmoVio8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZ5PKDm0F8wNm.diag
[2025-12-14 00:47:23] -rw-r--r-- 1 boincer umatlas     21067 Dec 14 00:47 stderr.txt
[2025-12-14 00:47:23] HITS file was successfully produced:
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas 215308482 Dec 14 00:46 shared/HITS.pool.root.1
[2025-12-14 00:47:23]  *** Contents of shared directory: ***
[2025-12-14 00:47:23] total 430332
[2025-12-14 00:47:23] -rw-r--r-- 2 boincer umatlas 222080460 Dec 13 20:30 ATLAS.root_0
[2025-12-14 00:47:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 20:30 start_atlas.sh
[2025-12-14 00:47:23] -rw-r--r-- 2 boincer umatlas    592400 Dec 13 20:30 input.tar.gz
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas 215308482 Dec 14 00:46 HITS.pool.root.1
[2025-12-14 00:47:23] -rw------- 1 boincer umatlas   2652160 Dec 14 00:47 result.tar.gz
00:47:25 (6460): run_atlas exited; CPU time 116254.621388
00:47:25 (6460): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN